RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 KLRC2P26717 231 aa19.74■□□□□ 0.75
PDLIM7-209ENST00000503346 AARSP49588 968 aaKnown RBP eCLIP19.74■□□□□ 0.754e-9■■□□□ 11.9
PDLIM7-209ENST00000503346 CYP2J2P51589 502 aa19.74■□□□□ 0.75
PDLIM7-209ENST00000503346 KCNQ1P51787 676 aa19.74■□□□□ 0.75
PDLIM7-209ENST00000503346 CLCN4P51793 760 aa19.74■□□□□ 0.75
PDLIM7-209ENST00000503346 MYBPC2Q14324 1141 aa19.74■□□□□ 0.75
PDLIM7-209ENST00000503346 SURF1Q15526 300 aa19.74■□□□□ 0.75
PDLIM7-209ENST00000503346 SNRNP35Q16560 246 aaKnown RBP19.74■□□□□ 0.75
PDLIM7-209ENST00000503346 PUS10Q3MIT2 529 aaKnown RBP19.74■□□□□ 0.75
PDLIM7-209ENST00000503346 C9orf57Q5W0N0 161 aa19.74■□□□□ 0.75
PDLIM7-209ENST00000503346 LLGL2Q6P1M3 1020 aa19.74■□□□□ 0.75
PDLIM7-209ENST00000503346 NOC3LQ8WTT2 800 aaKnown RBP19.74■□□□□ 0.75
PDLIM7-209ENST00000503346 SMARCE1Q969G3 411 aa19.74■□□□□ 0.75
PDLIM7-209ENST00000503346 PDE11AQ9HCR9 933 aa19.74■□□□□ 0.75
PDLIM7-209ENST00000503346 DMAC2Q9NW81 257 aa19.74■□□□□ 0.75
PDLIM7-209ENST00000503346 DPP3Q9NY33 737 aa19.74■□□□□ 0.75
PDLIM7-209ENST00000503346 CD207Q9UJ71 328 aa19.74■□□□□ 0.75
PDLIM7-209ENST00000503346 TRAF3IP3Q9Y228 551 aa19.74■□□□□ 0.75
PDLIM7-209ENST00000503346 PPEF2O14830 753 aa19.73■□□□□ 0.75
PDLIM7-209ENST00000503346 BMP1P13497 986 aa19.73■□□□□ 0.75
PDLIM7-209ENST00000503346 TKTP29401 623 aaKnown RBP19.73■□□□□ 0.75
PDLIM7-209ENST00000503346 MCM4P33991 863 aa19.73■□□□□ 0.75
PDLIM7-209ENST00000503346 PSMD5Q16401 504 aa19.73■□□□□ 0.75
PDLIM7-209ENST00000503346 ZNF658Q5TYW1 1059 aaPredicted RBP19.73■□□□□ 0.75
PDLIM7-209ENST00000503346 ANKRD54Q6NXT1 300 aa19.73■□□□□ 0.75
PDLIM7-209ENST00000503346 PRSS55Q6UWB4 352 aaPredicted RBP19.73■□□□□ 0.75
PDLIM7-209ENST00000503346 ERCC4Q92889 916 aaPredicted RBP19.73■□□□□ 0.75
PDLIM7-209ENST00000503346 GTPBP4Q9BZE4 634 aaKnown RBP19.73■□□□□ 0.75
PDLIM7-209ENST00000503346 TRIP11Q15643 1979 aa19.73■□□□□ 0.75
PDLIM7-209ENST00000503346 M0QZQ0 153 aa19.72■□□□□ 0.75
PDLIM7-209ENST00000503346 CALUO43852 315 aaPredicted RBP19.72■□□□□ 0.75
PDLIM7-209ENST00000503346 EPCAMP16422 314 aa19.72■□□□□ 0.75
PDLIM7-209ENST00000503346 HOXB8P17481 243 aaPredicted RBP19.72■□□□□ 0.75
PDLIM7-209ENST00000503346 TFAMQ00059 246 aaKnown RBP19.72■□□□□ 0.75
PDLIM7-209ENST00000503346 NFIL3Q16649 462 aa19.72■□□□□ 0.75
PDLIM7-209ENST00000503346 COBLL1Q53SF7 1204 aa19.72■□□□□ 0.75
PDLIM7-209ENST00000503346 ANKS3Q6ZW76 656 aa19.72■□□□□ 0.75
PDLIM7-209ENST00000503346 SMRP1Q8NCR6 262 aa19.72■□□□□ 0.75
PDLIM7-209ENST00000503346 CACTINQ8WUQ7 758 aaKnown RBP19.72■□□□□ 0.75
PDLIM7-209ENST00000503346 CLSTN3Q9BQT9 956 aa19.72■□□□□ 0.75
PDLIM7-209ENST00000503346 DZANK1Q9NVP4 752 aa19.72■□□□□ 0.75
PDLIM7-209ENST00000503346 MTRRQ9UBK8 725 aa19.72■□□□□ 0.75
PDLIM7-209ENST00000503346 PCDHB8Q9UN66 801 aa19.72■□□□□ 0.75
PDLIM7-209ENST00000503346 MAPK8IP1Q9UQF2 711 aa19.72■□□□□ 0.75
PDLIM7-209ENST00000503346 BACE2Q9Y5Z0 518 aa19.72■□□□□ 0.75
PDLIM7-209ENST00000503346 PDCD11Q14690 1871 aaKnown RBP19.71■□□□□ 0.75
PDLIM7-209ENST00000503346 GRXCR2A6NFK2 248 aa19.71■□□□□ 0.75
PDLIM7-209ENST00000503346 EXOC3O60645 756 aa19.71■□□□□ 0.75
PDLIM7-209ENST00000503346 NR3C1P04150 777 aa19.71■□□□□ 0.75
PDLIM7-209ENST00000503346 RPL17P18621 184 aaKnown RBP19.71■□□□□ 0.75
PDLIM7-209ENST00000503346 LILRA4P59901 499 aa19.71■□□□□ 0.75
PDLIM7-209ENST00000503346 CYP24A1Q07973 514 aa19.71■□□□□ 0.75
PDLIM7-209ENST00000503346 SMAD4Q13485 552 aaKnown RBP19.71■□□□□ 0.75
PDLIM7-209ENST00000503346 MRPL58Q14197 206 aaKnown RBP19.71■□□□□ 0.75
PDLIM7-209ENST00000503346 PSMD6Q15008 389 aa19.71■□□□□ 0.75
PDLIM7-209ENST00000503346 CLUL1Q15846 466 aa19.71■□□□□ 0.75
PDLIM7-209ENST00000503346 PTCRAQ6ISU1 281 aaPredicted RBP19.71■□□□□ 0.75
PDLIM7-209ENST00000503346 SYCE2Q6PIF2 218 aa19.71■□□□□ 0.75
PDLIM7-209ENST00000503346 SMYD4Q8IYR2 804 aaPredicted RBP19.71■□□□□ 0.75
PDLIM7-209ENST00000503346 C1orf127Q8N9H9 656 aa19.71■□□□□ 0.75
PDLIM7-209ENST00000503346 RDH13Q8NBN7 331 aa19.71■□□□□ 0.75
PDLIM7-209ENST00000503346 APPL2Q8NEU8 664 aa19.71■□□□□ 0.75
PDLIM7-209ENST00000503346 MFSD14AQ96MC6 490 aa19.71■□□□□ 0.75
PDLIM7-209ENST00000503346 INTS13Q9NVM9 706 aa19.71■□□□□ 0.75
PDLIM7-209ENST00000503346 BRWD1Q9NSI6 2320 aa19.7■□□□□ 0.74
PDLIM7-209ENST00000503346 MBTPS2O43462 519 aa19.7■□□□□ 0.74
PDLIM7-209ENST00000503346 GLUD1P00367 558 aa19.7■□□□□ 0.74
PDLIM7-209ENST00000503346 ZCWPW2Q504Y3 356 aa19.7■□□□□ 0.74
PDLIM7-209ENST00000503346 VARS2Q5ST30 1063 aaKnown RBP19.7■□□□□ 0.74
PDLIM7-209ENST00000503346 LILRA6Q6PI73 481 aa19.7■□□□□ 0.74
PDLIM7-209ENST00000503346 WDR49Q8IV35 697 aa19.7■□□□□ 0.74
PDLIM7-209ENST00000503346 CXorf38Q8TB03 319 aa19.7■□□□□ 0.74
PDLIM7-209ENST00000503346 GBP4Q96PP9 640 aa19.7■□□□□ 0.74
PDLIM7-209ENST00000503346 S1PR5Q9H228 398 aa19.7■□□□□ 0.74
PDLIM7-209ENST00000503346 ITGA11Q9UKX5 1188 aa19.7■□□□□ 0.74
PDLIM7-209ENST00000503346 FAM50BQ9Y247 325 aa19.7■□□□□ 0.74
PDLIM7-209ENST00000503346 H7C4K7 107 aa19.69■□□□□ 0.74
PDLIM7-209ENST00000503346 SPTLC1O15269 473 aa19.69■□□□□ 0.74
PDLIM7-209ENST00000503346 TGM5O43548 720 aa19.69■□□□□ 0.74
PDLIM7-209ENST00000503346 TBC1D4O60343 1298 aa19.69■□□□□ 0.74
PDLIM7-209ENST00000503346 TMEM191BP0C7N4 346 aa19.69■□□□□ 0.74
PDLIM7-209ENST00000503346 PRCPP42785 496 aa19.69■□□□□ 0.74
PDLIM7-209ENST00000503346 TAF6P49848 677 aa19.69■□□□□ 0.74
PDLIM7-209ENST00000503346 DUOXA2Q1HG44 320 aa19.69■□□□□ 0.74
PDLIM7-209ENST00000503346 HDAC7Q8WUI4 952 aa19.69■□□□□ 0.74
PDLIM7-209ENST00000503346 ANKRD36BP1Q96IX9 119 aa19.69■□□□□ 0.74
PDLIM7-209ENST00000503346 MTMR12Q9C0I1 747 aa19.69■□□□□ 0.74
PDLIM7-209ENST00000503346 GZF1Q9H116 711 aaPredicted RBP19.69■□□□□ 0.74
PDLIM7-209ENST00000503346 DPP7Q9UHL4 492 aa19.69■□□□□ 0.74
PDLIM7-209ENST00000503346 MAN1B1Q9UKM7 699 aa19.69■□□□□ 0.74
PDLIM7-209ENST00000503346 PTPRJQ12913 1337 aa19.69■□□□□ 0.74
PDLIM7-209ENST00000503346 TULP1O00294 542 aaPredicted RBP19.68■□□□□ 0.74
PDLIM7-209ENST00000503346 ADAM12O43184 909 aa19.68■□□□□ 0.74
PDLIM7-209ENST00000503346 ITGB3P05106 788 aa19.68■□□□□ 0.74
PDLIM7-209ENST00000503346 IL9P15248 144 aa19.68■□□□□ 0.74
PDLIM7-209ENST00000503346 TYMPP19971 482 aa19.68■□□□□ 0.74
PDLIM7-209ENST00000503346 PNPLA4P41247 253 aa19.68■□□□□ 0.74
PDLIM7-209ENST00000503346 RAB33AQ14088 237 aa19.68■□□□□ 0.74
PDLIM7-209ENST00000503346 LMBRD2Q68DH5 695 aaPredicted RBP19.68■□□□□ 0.74
PDLIM7-209ENST00000503346 SLC8B1Q6J4K2 584 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms