RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 CIDECQ96AQ7 238 aaPredicted RBP6.9□□□□□ -1.3
CLCN3-203ENST00000502998 SLC47A1Q96FL8 570 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 TSNARE1Q96NA8 513 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 ACAP3Q96P50 834 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 CTRCQ99895 268 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 NUDT12Q9BQG2 462 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 HEPHQ9BQS7 1158 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 KIAA1683Q9H0B3 1180 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 EPB41L1Q9H4G0 881 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 EHD1Q9H4M9 534 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 DENND2DQ9H6A0 471 aaPredicted RBP6.9□□□□□ -1.3
CLCN3-203ENST00000502998 MMRN2Q9H8L6 949 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 FANCEQ9HB96 536 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 ABCB6Q9NP58 842 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 NGRNQ9NPE2 291 aaKnown RBP6.9□□□□□ -1.3
CLCN3-203ENST00000502998 POLE3Q9NRF9 147 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 PAG1Q9NWQ8 432 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.9□□□□□ -1.3
CLCN3-203ENST00000502998 PTTG2Q9NZH5 202 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 RNF181Q9P0P0 153 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 LUZP4Q9P127 313 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 AMACRQ9UHK6 382 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 MOSPD1Q9UJG1 213 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 MRPL42Q9Y6G3 142 aaKnown RBP6.9□□□□□ -1.3
CLCN3-203ENST00000502998 CARMIL3Q8ND23 1372 aa6.9□□□□□ -1.31
CLCN3-203ENST00000502998 SCN7AQ01118 1682 aa6.9□□□□□ -1.31
CLCN3-203ENST00000502998 DLEC1Q9Y238 1755 aa6.9□□□□□ -1.31
CLCN3-203ENST00000502998 A0A087WZG4 1122 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 A0A1W2PQ67 120 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 PRAMEF22A3QJZ6 481 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 FOXN1O15353 648 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 STX10O60499 249 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 GPC4O75487 556 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 KRT75O95678 551 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 GNA14O95837 355 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 PRLP01236 227 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 P4HBP07237 508 aaKnown RBP6.89□□□□□ -1.31
CLCN3-203ENST00000502998 SNRPAP09012 282 aaKnown RBP6.89□□□□□ -1.31
CLCN3-203ENST00000502998 SYN1P17600 705 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 ACAT1P24752 427 aaKnown RBP6.89□□□□□ -1.31
CLCN3-203ENST00000502998 GNA11P29992 359 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 PBLDP30039 288 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-203ENST00000502998 IL6STP40189 918 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-203ENST00000502998 RFC5P40937 340 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 CD86P42081 329 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 ABCG1P45844 678 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 STT3AP46977 705 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 PCYT1AP49585 367 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 PPM1FP49593 454 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-203ENST00000502998 VPS41P49754 854 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 RGS7P49802 495 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 SCNN1DP51172 638 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 EIF4A1P60842 406 aaKnown RBP6.89□□□□□ -1.31
CLCN3-203ENST00000502998 MDM2Q00987 491 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-203ENST00000502998 DHX9Q08211 1270 aaKnown RBP6.89□□□□□ -1.31
CLCN3-203ENST00000502998 KPNB1Q14974 876 aaKnown RBP6.89□□□□□ -1.31
CLCN3-203ENST00000502998 ZNF124Q15973 351 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 NFE2Q16621 373 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-203ENST00000502998 PTGISQ16647 500 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 EAPPQ56P03 285 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-203ENST00000502998 LDLRAD1Q5T700 205 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 MAP3K21Q5TCX8 1036 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 RNF220Q5VTB9 566 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 AADACL4Q5VUY2 407 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 OLFM4Q6UX06 510 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 KIF6Q6ZMV9 814 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 CYP2U1Q7Z449 544 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 STX12Q86Y82 276 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 CDH26Q8IXH8 852 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 C16orf71Q8IYS4 520 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-203ENST00000502998 NUP93Q8N1F7 819 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 NATD1Q8N6N6 113 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 ZNF565Q8N9K5 539 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 KCT2Q8NC54 265 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 RNF169Q8NCN4 708 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 GALNT11Q8NCW6 608 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 TTLQ8NG68 377 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 OR6C4Q8NGE1 309 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 TTLL11Q8NHH1 800 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 PLEKHO2Q8TD55 490 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 AGAP11Q8TF27 550 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 SEPT1Q8WYJ6 367 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 TTC17Q96AE7 1141 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 EME1Q96AY2 570 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 ARL8AQ96BM9 186 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 ZNF274Q96GC6 653 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-203ENST00000502998 CDCA7LQ96GN5 454 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 REXO5Q96IC2 774 aaKnown RBP6.89□□□□□ -1.31
CLCN3-203ENST00000502998 ATP6V1G3Q96LB4 118 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 HS6ST2Q96MM7 605 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 C7orf25Q9BPX7 421 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 CCDC106Q9BWC9 280 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 NUSAP1Q9BXS6 441 aaKnown RBP6.89□□□□□ -1.31
CLCN3-203ENST00000502998 IMPG2Q9BZV3 1241 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 RUBCNLQ9H714 662 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 VRTNQ9H8Y1 702 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 DDX18Q9NVP1 670 aaKnown RBP6.89□□□□□ -1.31
CLCN3-203ENST00000502998 MRPL39Q9NYK5 338 aaKnown RBP6.89□□□□□ -1.31
CLCN3-203ENST00000502998 IL37Q9NZH6 218 aa6.89□□□□□ -1.31
CLCN3-203ENST00000502998 DLGAP2Q9P1A6 1054 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms