RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 SUSD3Q96L08 255 aa27.15■■□□□ 1.94
LSM6-202ENST00000502781 FNBP1Q96RU3 617 aa27.15■■□□□ 1.94
LSM6-202ENST00000502781 MKNK1Q9BUB5 465 aa27.15■■□□□ 1.94
LSM6-202ENST00000502781 MTMR12Q9C0I1 747 aa27.15■■□□□ 1.94
LSM6-202ENST00000502781 MRPL17Q9NRX2 175 aaKnown RBP27.15■■□□□ 1.94
LSM6-202ENST00000502781 NUB1Q9Y5A7 615 aa27.15■■□□□ 1.94
LSM6-202ENST00000502781 URODP06132 367 aa27.14■■□□□ 1.94
LSM6-202ENST00000502781 PAX3P23760 479 aa27.14■■□□□ 1.94
LSM6-202ENST00000502781 FKBP3Q00688 224 aaKnown RBP27.14■■□□□ 1.94
LSM6-202ENST00000502781 ENPEPQ07075 957 aa27.14■■□□□ 1.94
LSM6-202ENST00000502781 DUOXA2Q1HG44 320 aa27.14■■□□□ 1.94
LSM6-202ENST00000502781 RTP2Q5QGT7 225 aa27.14■■□□□ 1.94
LSM6-202ENST00000502781 TMC2Q8TDI7 906 aa27.14■■□□□ 1.94
LSM6-202ENST00000502781 PIK3R5Q8WYR1 880 aa27.14■■□□□ 1.94
LSM6-202ENST00000502781 B3GALT6Q96L58 329 aa27.14■■□□□ 1.94
LSM6-202ENST00000502781 POP1Q99575 1024 aaKnown RBP27.14■■□□□ 1.94
LSM6-202ENST00000502781 TTPALQ9BTX7 342 aa27.14■■□□□ 1.94
LSM6-202ENST00000502781 RXFP1Q9HBX9 757 aa27.14■■□□□ 1.94
LSM6-202ENST00000502781 ITGA11Q9UKX5 1188 aa27.14■■□□□ 1.94
LSM6-202ENST00000502781 SSX2IPQ9Y2D8 614 aa27.14■■□□□ 1.94
LSM6-202ENST00000502781 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.13■■□□□ 1.93
LSM6-202ENST00000502781 M0QZQ0 153 aa27.13■■□□□ 1.93
LSM6-202ENST00000502781 TMEM191BP0C7N4 346 aa27.13■■□□□ 1.93
LSM6-202ENST00000502781 DLATP10515 647 aaKnown RBP27.13■■□□□ 1.93
LSM6-202ENST00000502781 PSMC2P35998 433 aaKnown RBP27.13■■□□□ 1.93
LSM6-202ENST00000502781 LILRA4P59901 499 aa27.13■■□□□ 1.93
LSM6-202ENST00000502781 KLHL10Q6JEL2 608 aa27.13■■□□□ 1.93
LSM6-202ENST00000502781 MLKLQ8NB16 471 aa27.13■■□□□ 1.93
LSM6-202ENST00000502781 NELFBQ8WX92 580 aa27.13■■□□□ 1.93
LSM6-202ENST00000502781 PPM1EQ8WY54 764 aa27.13■■□□□ 1.93
LSM6-202ENST00000502781 BORCS6Q96GS4 357 aa27.13■■□□□ 1.93
LSM6-202ENST00000502781 ANKRD36BP1Q96IX9 119 aa27.13■■□□□ 1.93
LSM6-202ENST00000502781 CDCA3Q99618 268 aaPredicted RBP27.13■■□□□ 1.93
LSM6-202ENST00000502781 DUSP9Q99956 384 aaKnown RBP27.13■■□□□ 1.93
LSM6-202ENST00000502781 SIX4Q9UIU6 781 aa27.13■■□□□ 1.93
LSM6-202ENST00000502781 BRWD1Q9NSI6 2320 aa27.12■■□□□ 1.93
LSM6-202ENST00000502781 LRRIQ3A6PVS8 624 aaPredicted RBP27.12■■□□□ 1.93
LSM6-202ENST00000502781 I3L4J1 428 aa27.12■■□□□ 1.93
LSM6-202ENST00000502781 SYN3O14994 580 aa27.12■■□□□ 1.93
LSM6-202ENST00000502781 CETN3O15182 167 aa27.12■■□□□ 1.93
LSM6-202ENST00000502781 SPTLC1O15269 473 aa27.12■■□□□ 1.93
LSM6-202ENST00000502781 TNNI1P19237 187 aa27.12■■□□□ 1.93
LSM6-202ENST00000502781 NRIP1P48552 1158 aa27.12■■□□□ 1.93
LSM6-202ENST00000502781 PAK1Q13153 545 aa27.12■■□□□ 1.93
LSM6-202ENST00000502781 DUSP6Q16828 381 aa27.12■■□□□ 1.93
LSM6-202ENST00000502781 CTC1Q2NKJ3 1217 aa27.12■■□□□ 1.93
LSM6-202ENST00000502781 SCARA3Q6AZY7 606 aa27.12■■□□□ 1.93
LSM6-202ENST00000502781 KIAA1841Q6NSI8 718 aa27.12■■□□□ 1.93
LSM6-202ENST00000502781 ZNF516Q92618 1163 aa27.12■■□□□ 1.93
LSM6-202ENST00000502781 EEF2KMTQ96G04 330 aa27.12■■□□□ 1.93
LSM6-202ENST00000502781 TLE6Q9H808 572 aa27.12■■□□□ 1.93
LSM6-202ENST00000502781 BICDL2A1A5D9 508 aa27.11■■□□□ 1.93
LSM6-202ENST00000502781 NCK2O43639 380 aa27.11■■□□□ 1.93
LSM6-202ENST00000502781 ITGB3P05106 788 aa27.11■■□□□ 1.93
LSM6-202ENST00000502781 GTF2F1P35269 517 aaKnown RBP eCLIP27.11■■□□□ 1.93
LSM6-202ENST00000502781 KCNC3Q14003 757 aa27.11■■□□□ 1.93
LSM6-202ENST00000502781 INTS8Q75QN2 995 aaKnown RBP27.11■■□□□ 1.93
LSM6-202ENST00000502781 RBM23Q86U06 439 aaKnown RBP27.11■■□□□ 1.93
LSM6-202ENST00000502781 FAM186BQ8IYM0 893 aa27.11■■□□□ 1.93
LSM6-202ENST00000502781 LNX1Q8TBB1 728 aaPredicted RBP27.11■■□□□ 1.93
LSM6-202ENST00000502781 RIN2Q8WYP3 895 aaPredicted RBP27.11■■□□□ 1.93
LSM6-202ENST00000502781 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.11■■□□□ 1.93
LSM6-202ENST00000502781 FNIP2Q9P278 1114 aa27.11■■□□□ 1.93
LSM6-202ENST00000502781 CTNND2Q9UQB3 1225 aa27.11■■□□□ 1.93
LSM6-202ENST00000502781 COL6A3P12111 3177 aa27.1■■□□□ 1.93
LSM6-202ENST00000502781 C2CD2LO14523 706 aa27.1■■□□□ 1.93
LSM6-202ENST00000502781 PER2O15055 1255 aa27.1■■□□□ 1.93
LSM6-202ENST00000502781 SLC34A2O95436 690 aa27.1■■□□□ 1.93
LSM6-202ENST00000502781 TNNC2P02585 160 aa27.1■■□□□ 1.93
LSM6-202ENST00000502781 CNPP09543 421 aaKnown RBP27.1■■□□□ 1.93
LSM6-202ENST00000502781 TKTP29401 623 aaKnown RBP27.1■■□□□ 1.93
LSM6-202ENST00000502781 POLR2BP30876 1174 aaKnown RBP27.1■■□□□ 1.93
LSM6-202ENST00000502781 AP3M2P53677 418 aa27.1■■□□□ 1.93
LSM6-202ENST00000502781 DLG4P78352 724 aa27.1■■□□□ 1.93
LSM6-202ENST00000502781 C1orf220Q5T0J3 134 aa27.1■■□□□ 1.93
LSM6-202ENST00000502781 CCDC183Q5T5S1 534 aa27.1■■□□□ 1.93
LSM6-202ENST00000502781 TRAPPC11Q7Z392 1133 aa27.1■■□□□ 1.93
LSM6-202ENST00000502781 CSGALNACT2Q8N6G5 542 aa27.1■■□□□ 1.93
LSM6-202ENST00000502781 LRRC52Q8N7C0 313 aa27.1■■□□□ 1.93
LSM6-202ENST00000502781 EFHBQ8N7U6 833 aa27.1■■□□□ 1.93
LSM6-202ENST00000502781 KLHL5Q96PQ7 755 aa27.1■■□□□ 1.93
LSM6-202ENST00000502781 MED15Q96RN5 788 aa27.1■■□□□ 1.93
LSM6-202ENST00000502781 TMEM63CQ9P1W3 806 aa27.1■■□□□ 1.93
LSM6-202ENST00000502781 VWA8A3KMH1 1905 aa27.1■■□□□ 1.93
LSM6-202ENST00000502781 FSD2A1L4K1 749 aa27.09■■□□□ 1.93
LSM6-202ENST00000502781 IKBKBO14920 756 aa27.09■■□□□ 1.93
LSM6-202ENST00000502781 SLC16A3O15427 465 aaKnown RBP27.09■■□□□ 1.93
LSM6-202ENST00000502781 PNPLA4P41247 253 aa27.09■■□□□ 1.93
LSM6-202ENST00000502781 TAF6P49848 677 aa27.09■■□□□ 1.93
LSM6-202ENST00000502781 NLRP12P59046 1061 aa27.09■■□□□ 1.93
LSM6-202ENST00000502781 RBP5P82980 135 aa27.09■■□□□ 1.93
LSM6-202ENST00000502781 ADAM15Q13444 863 aa27.09■■□□□ 1.93
LSM6-202ENST00000502781 MRPL58Q14197 206 aaKnown RBP27.09■■□□□ 1.93
LSM6-202ENST00000502781 PDXDC1Q6P996 788 aa27.09■■□□□ 1.93
LSM6-202ENST00000502781 CEP57Q86XR8 500 aa27.09■■□□□ 1.93
LSM6-202ENST00000502781 PABPC5Q96DU9 382 aaKnown RBP27.09■■□□□ 1.93
LSM6-202ENST00000502781 RWDD2AQ9UIY3 292 aa27.09■■□□□ 1.93
LSM6-202ENST00000502781 PCDHB8Q9UN66 801 aa27.09■■□□□ 1.93
LSM6-202ENST00000502781 AGAP1Q9UPQ3 857 aa27.09■■□□□ 1.93
LSM6-202ENST00000502781 EYSQ5T1H1 3165 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms