RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 TTC12Q9H892 705 aaPredicted RBP10.04□□□□□ -0.8
CCDC171-209ENST00000498725 AVENQ9NQS1 362 aaPredicted RBP10.04□□□□□ -0.8
CCDC171-209ENST00000498725 BACE2Q9Y5Z0 518 aa10.04□□□□□ -0.8
CCDC171-209ENST00000498725 ANK1P16157 1881 aa10.04□□□□□ -0.8
CCDC171-209ENST00000498725 NUP210Q8TEM1 1887 aaPredicted RBP10.04□□□□□ -0.8
CCDC171-209ENST00000498725 TMEM189-UBE2V1I3L0A0 370 aa10.03□□□□□ -0.8
CCDC171-209ENST00000498725 K7ESF4 209 aa10.03□□□□□ -0.8
CCDC171-209ENST00000498725 ABLIM3O94929 683 aa10.03□□□□□ -0.8
CCDC171-209ENST00000498725 SOX4Q06945 474 aaPredicted RBP10.03□□□□□ -0.8
CCDC171-209ENST00000498725 NR5A1Q13285 461 aa10.03□□□□□ -0.8
CCDC171-209ENST00000498725 PON2Q15165 354 aa10.03□□□□□ -0.8
CCDC171-209ENST00000498725 MAPK6Q16659 721 aa10.03□□□□□ -0.8
CCDC171-209ENST00000498725 UPP1Q16831 310 aa10.03□□□□□ -0.8
CCDC171-209ENST00000498725 CTXN3Q4LDR2 81 aa10.03□□□□□ -0.8
CCDC171-209ENST00000498725 WDR44Q5JSH3 913 aa10.03□□□□□ -0.8
CCDC171-209ENST00000498725 IQCEQ6IPM2 695 aa10.03□□□□□ -0.8
CCDC171-209ENST00000498725 RUFY3Q7L099 469 aa10.03□□□□□ -0.8
CCDC171-209ENST00000498725 MFSD6LQ8IWD5 586 aa10.03□□□□□ -0.8
CCDC171-209ENST00000498725 DEPTORQ8TB45 409 aa10.03□□□□□ -0.8
CCDC171-209ENST00000498725 RSPRY1Q96DX4 576 aa10.03□□□□□ -0.8
CCDC171-209ENST00000498725 ZFYVE19Q96K21 471 aa10.03□□□□□ -0.8
CCDC171-209ENST00000498725 NAP1L4Q99733 375 aaKnown RBP10.03□□□□□ -0.8
CCDC171-209ENST00000498725 HSD17B14Q9BPX1 270 aa10.03□□□□□ -0.8
CCDC171-209ENST00000498725 IER2Q9BTL4 223 aa10.03□□□□□ -0.8
CCDC171-209ENST00000498725 C2orf40Q9H1Z8 148 aa10.03□□□□□ -0.8
CCDC171-209ENST00000498725 CEP72Q9P209 647 aa10.03□□□□□ -0.8
CCDC171-209ENST00000498725 SPAG17Q6Q759 2223 aa10.03□□□□□ -0.8
CCDC171-209ENST00000498725 ZNF638Q14966 1978 aaKnown RBP10.03□□□□□ -0.8
CCDC171-209ENST00000498725 CHD6Q8TD26 2715 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 SMIM28A0A1B0GU29 152 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 C1QTNF9BB2RNN3 333 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 H7C4K7 107 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 PODXLO00592 558 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 MOSPD3O75425 235 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 LYPLA2O95372 231 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 C1QTNF9P0C862 333 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 CCDC192P0DO97 292 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 CPB1P15086 417 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 ATF2P15336 505 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 XBP1P17861 261 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 SPINK2P20155 84 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 CNR2P34972 360 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 RBM25P49756 843 aaKnown RBP10.02□□□□□ -0.81
CCDC171-209ENST00000498725 CDR1P51861 262 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 EVCP57679 992 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 FAM187BQ17R55 369 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 STXBP5Q5T5C0 1151 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 STPG1Q5TH74 334 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 CDCA2Q69YH5 1023 aaPredicted RBP10.02□□□□□ -0.81
CCDC171-209ENST00000498725 SLC8B1Q6J4K2 584 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 PSAPL1Q6NUJ1 521 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 TXNDC11Q6PKC3 985 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 RTL10Q7L3V2 364 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 KBTBD6Q86V97 674 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 TCEAL8Q8IYN2 117 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 TMEM130Q8N3G9 435 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 FBXL16Q8N461 479 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 CEP120Q8N960 986 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 MCPH1Q8NEM0 835 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 SHKBP1Q8TBC3 707 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 DEPDC1BQ8WUY9 529 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 ZNF274Q96GC6 653 aaPredicted RBP10.02□□□□□ -0.81
CCDC171-209ENST00000498725 UROC1Q96N76 676 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 ASAH2Q9NR71 780 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 FBXL5Q9UKA1 691 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 NUB1Q9Y5A7 615 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 CYP46A1Q9Y6A2 500 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 CACNA1GO43497 2377 aa10.02□□□□□ -0.81
CCDC171-209ENST00000498725 A0A1W2PRU2 124 aa10.01□□□□□ -0.81
CCDC171-209ENST00000498725 SPECC1L-ADORA2AF8WAN1 911 aa10.01□□□□□ -0.81
CCDC171-209ENST00000498725 ACKR2O00590 384 aa10.01□□□□□ -0.81
CCDC171-209ENST00000498725 WNT7AO00755 349 aa10.01□□□□□ -0.81
CCDC171-209ENST00000498725 EXTL3O43909 919 aa10.01□□□□□ -0.81
CCDC171-209ENST00000498725 MED24O75448 989 aa10.01□□□□□ -0.81
CCDC171-209ENST00000498725 KCNK5O95279 499 aa10.01□□□□□ -0.81
CCDC171-209ENST00000498725 HARSP12081 509 aaKnown RBP10.01□□□□□ -0.81
CCDC171-209ENST00000498725 TIE1P35590 1138 aa10.01□□□□□ -0.81
CCDC171-209ENST00000498725 KRT2P35908 639 aa10.01□□□□□ -0.81
CCDC171-209ENST00000498725 YARSP54577 528 aaKnown RBP10.01□□□□□ -0.81
CCDC171-209ENST00000498725 DCAF4L1Q3SXM0 396 aa10.01□□□□□ -0.81
CCDC171-209ENST00000498725 NT5DC1Q5TFE4 455 aa10.01□□□□□ -0.81
CCDC171-209ENST00000498725 ATF7IP2Q5U623 682 aa10.01□□□□□ -0.81
CCDC171-209ENST00000498725 TCEAL6Q6IPX3 200 aa10.01□□□□□ -0.81
CCDC171-209ENST00000498725 PKN3Q6P5Z2 889 aa10.01□□□□□ -0.81
CCDC171-209ENST00000498725 RNF19BQ6ZMZ0 732 aa10.01□□□□□ -0.81
CCDC171-209ENST00000498725 WDR5BQ86VZ2 330 aa10.01□□□□□ -0.81
CCDC171-209ENST00000498725 TCEAL3Q969E4 200 aa10.01□□□□□ -0.81
CCDC171-209ENST00000498725 C18orf25Q96B23 403 aaPredicted RBP10.01□□□□□ -0.81
CCDC171-209ENST00000498725 PGLYRP2Q96PD5 576 aa10.01□□□□□ -0.81
CCDC171-209ENST00000498725 CCDC113Q9H0I3 377 aa10.01□□□□□ -0.81
CCDC171-209ENST00000498725 SCUBE2Q9NQ36 999 aa10.01□□□□□ -0.81
CCDC171-209ENST00000498725 TRPV5Q9NQA5 729 aa10.01□□□□□ -0.81
CCDC171-209ENST00000498725 POLR3BQ9NW08 1133 aaPredicted RBP10.01□□□□□ -0.81
CCDC171-209ENST00000498725 GTSE1Q9NYZ3 720 aa10.01□□□□□ -0.81
CCDC171-209ENST00000498725 ZMIZ1Q9ULJ6 1067 aa10.01□□□□□ -0.81
CCDC171-209ENST00000498725 FRYQ5TBA9 3013 aa10□□□□□ -0.81
CCDC171-209ENST00000498725 ARHGEF35A5YM69 484 aa10□□□□□ -0.81
CCDC171-209ENST00000498725 ARNTLO00327 626 aa10□□□□□ -0.81
CCDC171-209ENST00000498725 DPYSL4O14531 572 aa10□□□□□ -0.81
CCDC171-209ENST00000498725 TM4SF5O14894 197 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms