RNA–Protein interactions for RNA: ENST00000498613.1

TMEM39B-209, Transcript of transmembrane protein 39B, humanhuman

TSL 3

Gene TMEM39B, Length 854 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-209ENST00000498613 SV2CQ496J9 727 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 TIGD5Q53EQ6 642 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 FAM171A1Q5VUB5 890 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 TCERG1LQ5VWI1 586 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 C9orf57Q5W0N0 161 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 FUT10Q6P4F1 479 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 ELMSAN1Q6PJG2 1045 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 METTL23Q86XA0 190 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 CEP57Q86XR8 500 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 GPR65Q8IYL9 337 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 ANKRD20A12PQ8NF67 263 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 TCF25Q9BQ70 676 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 EMILIN2Q9BXX0 1053 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 IMPG2Q9BZV3 1241 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 DNAI2Q9GZS0 605 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 TMEM63CQ9P1W3 806 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 HCSTQ9UBK5 93 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 AGAP1Q9UPQ3 857 aa13.75□□□□□ -0.21
TMEM39B-209ENST00000498613 TDRD15B5MCY1 1934 aaKnown RBP13.74□□□□□ -0.21
TMEM39B-209ENST00000498613 PTPRSQ13332 1948 aa13.74□□□□□ -0.21
TMEM39B-209ENST00000498613 TRIM49BA6NDI0 452 aa13.74□□□□□ -0.21
TMEM39B-209ENST00000498613 SMTNL1A8MU46 457 aa13.74□□□□□ -0.21
TMEM39B-209ENST00000498613 H7C4K7 107 aa13.74□□□□□ -0.21
TMEM39B-209ENST00000498613 RFXAPO00287 272 aa13.74□□□□□ -0.21
TMEM39B-209ENST00000498613 LINC00271P0C7V0 271 aa13.74□□□□□ -0.21
TMEM39B-209ENST00000498613 GLUD2P49448 558 aa13.74□□□□□ -0.21
TMEM39B-209ENST00000498613 BFSP1Q12934 665 aa13.74□□□□□ -0.21
TMEM39B-209ENST00000498613 DPCR1Q3MIW9 517 aa13.74□□□□□ -0.21
TMEM39B-209ENST00000498613 TTI2Q6NXR4 508 aa13.74□□□□□ -0.21
TMEM39B-209ENST00000498613 TRAPPC11Q7Z392 1133 aa13.74□□□□□ -0.21
TMEM39B-209ENST00000498613 LRRC52Q8N7C0 313 aa13.74□□□□□ -0.21
TMEM39B-209ENST00000498613 ZSWIM2Q8NEG5 633 aa13.74□□□□□ -0.21
TMEM39B-209ENST00000498613 GDPD5Q8WTR4 605 aa13.74□□□□□ -0.21
TMEM39B-209ENST00000498613 MYLIPQ8WY64 445 aa13.74□□□□□ -0.21
TMEM39B-209ENST00000498613 RABGGTAQ92696 567 aa13.74□□□□□ -0.21
TMEM39B-209ENST00000498613 ANP32EQ9BTT0 268 aa13.74□□□□□ -0.21
TMEM39B-209ENST00000498613 TTPALQ9BTX7 342 aa13.74□□□□□ -0.21
TMEM39B-209ENST00000498613 OXCT2Q9BYC2 517 aaPredicted RBP13.74□□□□□ -0.21
TMEM39B-209ENST00000498613 CXCL16Q9H2A7 254 aa13.74□□□□□ -0.21
TMEM39B-209ENST00000498613 GOLGA2P5Q9HBQ8 144 aa13.74□□□□□ -0.21
TMEM39B-209ENST00000498613 TUBGCP4Q9UGJ1 667 aa13.74□□□□□ -0.21
TMEM39B-209ENST00000498613 DPP7Q9UHL4 492 aa13.74□□□□□ -0.21
TMEM39B-209ENST00000498613 DSEQ9UL01 958 aa13.74□□□□□ -0.21
TMEM39B-209ENST00000498613 GBF1Q92538 1859 aa13.74□□□□□ -0.21
TMEM39B-209ENST00000498613 PIRO00625 290 aa13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 SYN3O14994 580 aa13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 HUS1O60921 280 aa13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 N4BP1O75113 896 aaKnown RBP13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 KIF4AO95239 1232 aa13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 ITGB3P05106 788 aa13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 SRGAP2BP0DMP2 458 aa13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 CTSAP10619 480 aa13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 P4HA1P13674 534 aa13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 ATICP31939 592 aa13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 PMS1P54277 932 aaKnown RBP13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 LILRA4P59901 499 aa13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 TPM4P67936 248 aa13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 CLDN10P78369 228 aa13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 SOX4Q06945 474 aaPredicted RBP13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 SGSM1Q2NKQ1 1148 aa13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 ANKS3Q6ZW76 656 aa13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 PPFIBP1Q86W92 1011 aa13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 THEM5Q8N1Q8 247 aa13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 MRPL43Q8N983 215 aaKnown RBP13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 TAF4BQ92750 862 aa13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 EEF2KMTQ96G04 330 aa13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 POP1Q99575 1024 aaKnown RBP13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 CDCA3Q99618 268 aaPredicted RBP13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 MTMR12Q9C0I1 747 aa13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 THAP9Q9H5L6 903 aa13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 NSUN3Q9H649 340 aaKnown RBP13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 TLE6Q9H808 572 aa13.73□□□□□ -0.21
TMEM39B-209ENST00000498613 ANO9A1A5B4 782 aa13.72□□□□□ -0.21
TMEM39B-209ENST00000498613 BECN2A8MW95 431 aa13.72□□□□□ -0.21
TMEM39B-209ENST00000498613 KPNA7A9QM74 516 aa13.72□□□□□ -0.21
TMEM39B-209ENST00000498613 MEFVO15553 781 aaPredicted RBP13.72□□□□□ -0.21
TMEM39B-209ENST00000498613 ODC1P11926 461 aa13.72□□□□□ -0.21
TMEM39B-209ENST00000498613 TRIM21P19474 475 aaKnown RBP13.72□□□□□ -0.21
TMEM39B-209ENST00000498613 CDK11BP21127 795 aaKnown RBP13.72□□□□□ -0.21
TMEM39B-209ENST00000498613 POLR2BP30876 1174 aaKnown RBP13.72□□□□□ -0.21
TMEM39B-209ENST00000498613 TYRO3Q06418 890 aa13.72□□□□□ -0.21
TMEM39B-209ENST00000498613 DCAF17Q5H9S7 520 aaPredicted RBP13.72□□□□□ -0.21
TMEM39B-209ENST00000498613 WDR44Q5JSH3 913 aa13.72□□□□□ -0.21
TMEM39B-209ENST00000498613 KRT39Q6A163 491 aa13.72□□□□□ -0.21
TMEM39B-209ENST00000498613 EFCAB13Q8IY85 973 aa13.72□□□□□ -0.21
TMEM39B-209ENST00000498613 ENOX1Q8TC92 643 aaKnown RBP13.72□□□□□ -0.21
TMEM39B-209ENST00000498613 HASPINQ8TF76 798 aa13.72□□□□□ -0.21
TMEM39B-209ENST00000498613 RIN2Q8WYP3 895 aaPredicted RBP13.72□□□□□ -0.21
TMEM39B-209ENST00000498613 HPDLQ96IR7 371 aa13.72□□□□□ -0.21
TMEM39B-209ENST00000498613 SUSD3Q96L08 255 aa13.72□□□□□ -0.21
TMEM39B-209ENST00000498613 DUSP9Q99956 384 aaKnown RBP13.72□□□□□ -0.21
TMEM39B-209ENST00000498613 PAAF1Q9BRP4 392 aa13.72□□□□□ -0.21
TMEM39B-209ENST00000498613 HERC2P3Q9BVR0 1158 aa13.72□□□□□ -0.21
TMEM39B-209ENST00000498613 GPR62Q9BZJ7 368 aa13.72□□□□□ -0.21
TMEM39B-209ENST00000498613 MARCH5Q9NX47 278 aa13.72□□□□□ -0.21
TMEM39B-209ENST00000498613 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.72□□□□□ -0.21
TMEM39B-209ENST00000498613 IRAK3Q9Y616 596 aa13.72□□□□□ -0.21
TMEM39B-209ENST00000498613 RALGAPA2Q2PPJ7 1873 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms