RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 LRPAP1P30533 357 aa17.51■□□□□ 0.39
NR1H3-227ENST00000498548 ROR1Q01973 937 aa17.51■□□□□ 0.39
NR1H3-227ENST00000498548 MRPL58Q14197 206 aaKnown RBP17.51■□□□□ 0.39
NR1H3-227ENST00000498548 CTXN3Q4LDR2 81 aa17.51■□□□□ 0.39
NR1H3-227ENST00000498548 POMGNT1Q8WZA1 660 aa17.51■□□□□ 0.39
NR1H3-227ENST00000498548 HPS3Q969F9 1004 aa17.51■□□□□ 0.39
NR1H3-227ENST00000498548 KCNK12Q9HB15 430 aa17.51■□□□□ 0.39
NR1H3-227ENST00000498548 HCFC1R1Q9NWW0 138 aa17.51■□□□□ 0.39
NR1H3-227ENST00000498548 SEL1LQ9UBV2 794 aa17.51■□□□□ 0.39
NR1H3-227ENST00000498548 FBXL5Q9UKA1 691 aa17.51■□□□□ 0.39
NR1H3-227ENST00000498548 STYXL1Q9Y6J8 313 aa17.51■□□□□ 0.39
NR1H3-227ENST00000498548 NOTCH4Q99466 2003 aa17.5■□□□□ 0.39
NR1H3-227ENST00000498548 H7C4K7 107 aa17.5■□□□□ 0.39
NR1H3-227ENST00000498548 NARSO43776 548 aaKnown RBP17.5■□□□□ 0.39
NR1H3-227ENST00000498548 TBC1D4O60343 1298 aa17.5■□□□□ 0.39
NR1H3-227ENST00000498548 PRPF6O94906 941 aaKnown RBP17.5■□□□□ 0.39
NR1H3-227ENST00000498548 NFICP08651 508 aa17.5■□□□□ 0.39
NR1H3-227ENST00000498548 HNRNPA1P09651 372 aaKnown RBP eCLIP17.5■□□□□ 0.39
NR1H3-227ENST00000498548 CYP3A5P20815 502 aa17.5■□□□□ 0.39
NR1H3-227ENST00000498548 FSHRP23945 695 aa17.5■□□□□ 0.39
NR1H3-227ENST00000498548 ADSSP30520 456 aa17.5■□□□□ 0.39
NR1H3-227ENST00000498548 ABCD1P33897 745 aa17.5■□□□□ 0.39
NR1H3-227ENST00000498548 E2F4Q16254 413 aa17.5■□□□□ 0.39
NR1H3-227ENST00000498548 L1TD1Q5T7N2 865 aaKnown RBP17.5■□□□□ 0.39
NR1H3-227ENST00000498548 IER5LQ5T953 404 aa17.5■□□□□ 0.39
NR1H3-227ENST00000498548 SPATA1Q5VX52 437 aa17.5■□□□□ 0.39
NR1H3-227ENST00000498548 SLFN12LQ6IEE8 588 aa17.5■□□□□ 0.39
NR1H3-227ENST00000498548 CRELD2Q6UXH1 353 aaPredicted RBP17.5■□□□□ 0.39
NR1H3-227ENST00000498548 DSTYKQ6XUX3 929 aa17.5■□□□□ 0.39
NR1H3-227ENST00000498548 UBALD2Q8IYN6 164 aa17.5■□□□□ 0.39
NR1H3-227ENST00000498548 FAM122AQ96E09 287 aa17.5■□□□□ 0.39
NR1H3-227ENST00000498548 CHAMP1Q96JM3 812 aa17.5■□□□□ 0.39
NR1H3-227ENST00000498548 ACCSQ96QU6 501 aa17.5■□□□□ 0.39
NR1H3-227ENST00000498548 PCDHB8Q9UN66 801 aa17.5■□□□□ 0.39
NR1H3-227ENST00000498548 TRIOO75962 3097 aa17.5■□□□□ 0.39
NR1H3-227ENST00000498548 FRMD3A2A2Y4 597 aa17.49■□□□□ 0.39
NR1H3-227ENST00000498548 XPOTO43592 962 aaKnown RBP17.49■□□□□ 0.39
NR1H3-227ENST00000498548 SEC24AO95486 1093 aa17.49■□□□□ 0.39
NR1H3-227ENST00000498548 VCPP55072 806 aaKnown RBP17.49■□□□□ 0.39
NR1H3-227ENST00000498548 DNM1Q05193 864 aaKnown RBP17.49■□□□□ 0.39
NR1H3-227ENST00000498548 UVSSAQ2YD98 709 aa17.49■□□□□ 0.39
NR1H3-227ENST00000498548 SLC8B1Q6J4K2 584 aa17.49■□□□□ 0.39
NR1H3-227ENST00000498548 SUGP1Q8IWZ8 645 aaKnown RBP17.49■□□□□ 0.39
NR1H3-227ENST00000498548 SYCP3Q8IZU3 236 aa17.49■□□□□ 0.39
NR1H3-227ENST00000498548 FBXL6Q8N531 539 aa17.49■□□□□ 0.39
NR1H3-227ENST00000498548 GLIS3Q8NEA6 775 aa17.49■□□□□ 0.39
NR1H3-227ENST00000498548 APPL2Q8NEU8 664 aa17.49■□□□□ 0.39
NR1H3-227ENST00000498548 BEST2Q8NFU1 509 aa17.49■□□□□ 0.39
NR1H3-227ENST00000498548 ITFG1Q8TB96 612 aa17.49■□□□□ 0.39
NR1H3-227ENST00000498548 HVCN1Q96D96 273 aa17.49■□□□□ 0.39
NR1H3-227ENST00000498548 SAAL1Q96ER3 474 aa17.49■□□□□ 0.39
NR1H3-227ENST00000498548 DNMT3BQ9UBC3 853 aaKnown RBP17.49■□□□□ 0.39
NR1H3-227ENST00000498548 PCDHA7Q9UN72 937 aa17.49■□□□□ 0.39
NR1H3-227ENST00000498548 SCN1AP35498 2009 aa17.48■□□□□ 0.39
NR1H3-227ENST00000498548 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.48■□□□□ 0.39
NR1H3-227ENST00000498548 GOLGA8IPA6NC78 632 aa17.48■□□□□ 0.39
NR1H3-227ENST00000498548 GOLGA8JA6NMD2 632 aa17.48■□□□□ 0.39
NR1H3-227ENST00000498548 M0QZQ0 153 aa17.48■□□□□ 0.39
NR1H3-227ENST00000498548 SPTLC1O15269 473 aa17.48■□□□□ 0.39
NR1H3-227ENST00000498548 ABLIM3O94929 683 aa17.48■□□□□ 0.39
NR1H3-227ENST00000498548 OR4Q2P0C623 313 aa17.48■□□□□ 0.39
NR1H3-227ENST00000498548 LAMP2P13473 410 aa17.48■□□□□ 0.39
NR1H3-227ENST00000498548 CASP1P29466 404 aa17.48■□□□□ 0.39
NR1H3-227ENST00000498548 ELF1P32519 619 aa17.48■□□□□ 0.39
NR1H3-227ENST00000498548 PLA2G5P39877 138 aa17.48■□□□□ 0.39
NR1H3-227ENST00000498548 WNT7BP56706 349 aa17.48■□□□□ 0.39
NR1H3-227ENST00000498548 TDGQ13569 410 aa17.48■□□□□ 0.39
NR1H3-227ENST00000498548 TMEM132DQ14C87 1099 aa17.48■□□□□ 0.39
NR1H3-227ENST00000498548 CD302Q8IX05 232 aa17.48■□□□□ 0.39
NR1H3-227ENST00000498548 CCDC65Q8IXS2 484 aa17.48■□□□□ 0.39
NR1H3-227ENST00000498548 ZNF461Q8TAF7 563 aa17.48■□□□□ 0.39
NR1H3-227ENST00000498548 NOC3LQ8WTT2 800 aaKnown RBP17.48■□□□□ 0.39
NR1H3-227ENST00000498548 FAM213AQ9BRX8 229 aa17.48■□□□□ 0.39
NR1H3-227ENST00000498548 PCIF1Q9H4Z3 704 aa17.48■□□□□ 0.39
NR1H3-227ENST00000498548 CYP4F11Q9HBI6 524 aa17.48■□□□□ 0.39
NR1H3-227ENST00000498548 EPS15L1Q9UBC2 864 aa17.48■□□□□ 0.39
NR1H3-227ENST00000498548 EXOC7Q9UPT5 735 aa17.48■□□□□ 0.39
NR1H3-227ENST00000498548 PCDHB13Q9Y5F0 798 aa17.48■□□□□ 0.39
NR1H3-227ENST00000498548 PRRG1O14668 218 aa17.47■□□□□ 0.39
NR1H3-227ENST00000498548 POLR2DO15514 142 aaKnown RBP17.47■□□□□ 0.39
NR1H3-227ENST00000498548 XYLBO75191 536 aa17.47■□□□□ 0.39
NR1H3-227ENST00000498548 HOXA9P31269 272 aa17.47■□□□□ 0.39
NR1H3-227ENST00000498548 ME1P48163 572 aa17.47■□□□□ 0.39
NR1H3-227ENST00000498548 POSTNQ15063 836 aa17.47■□□□□ 0.39
NR1H3-227ENST00000498548 C9orf57Q5W0N0 161 aa17.47■□□□□ 0.39
NR1H3-227ENST00000498548 ZNF280DQ6N043 979 aa17.47■□□□□ 0.39
NR1H3-227ENST00000498548 RNF19BQ6ZMZ0 732 aa17.47■□□□□ 0.39
NR1H3-227ENST00000498548 EFCAB13Q8IY85 973 aa17.47■□□□□ 0.39
NR1H3-227ENST00000498548 RPP25Q9BUL9 199 aaKnown RBP17.47■□□□□ 0.39
NR1H3-227ENST00000498548 TNMDQ9H2S6 317 aa17.47■□□□□ 0.39
NR1H3-227ENST00000498548 OLFML3Q9NRN5 406 aa17.47■□□□□ 0.39
NR1H3-227ENST00000498548 KBTBD4Q9NVX7 518 aa17.47■□□□□ 0.39
NR1H3-227ENST00000498548 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.47■□□□□ 0.39
NR1H3-227ENST00000498548 IGSF9Q9P2J2 1179 aa17.47■□□□□ 0.39
NR1H3-227ENST00000498548 KMT2EQ8IZD2 1858 aa17.47■□□□□ 0.39
NR1H3-227ENST00000498548 PIRO00625 290 aa17.46■□□□□ 0.39
NR1H3-227ENST00000498548 PDIA4P13667 645 aaKnown RBP17.46■□□□□ 0.39
NR1H3-227ENST00000498548 CPB1P15086 417 aa17.46■□□□□ 0.39
NR1H3-227ENST00000498548 ATF2P15336 505 aa17.46■□□□□ 0.39
NR1H3-227ENST00000498548 AVPR2P30518 371 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms