RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 GATA3P23771 443 aa3.22□□□□□ -1.89
SGMS1-205ENST00000498514 IL2P60568 153 aa3.22□□□□□ -1.89
SGMS1-205ENST00000498514 RPS7P62081 194 aaKnown RBP3.22□□□□□ -1.89
SGMS1-205ENST00000498514 CDK17Q00537 523 aa3.22□□□□□ -1.89
SGMS1-205ENST00000498514 FPGSQ05932 587 aa3.22□□□□□ -1.89
SGMS1-205ENST00000498514 TXNRD1Q16881 649 aa3.22□□□□□ -1.89
SGMS1-205ENST00000498514 YTHDF3Q7Z739 585 aaKnown RBP3.22□□□□□ -1.89
SGMS1-205ENST00000498514 LRRTM3Q86VH5 581 aa3.22□□□□□ -1.89
SGMS1-205ENST00000498514 RAX2Q96IS3 184 aa3.22□□□□□ -1.89
SGMS1-205ENST00000498514 LDAHQ9H6V9 325 aa3.22□□□□□ -1.89
SGMS1-205ENST00000498514 TMEM140Q9NV12 185 aa3.22□□□□□ -1.89
SGMS1-205ENST00000498514 AJAP1Q9UKB5 411 aaPredicted RBP3.22□□□□□ -1.89
SGMS1-205ENST00000498514 LRP12Q9Y561 859 aa3.22□□□□□ -1.89
SGMS1-205ENST00000498514 PRAMEF33A0A0G2JMD5 474 aa3.21□□□□□ -1.9
SGMS1-205ENST00000498514 FAM83GA6ND36 823 aa3.21□□□□□ -1.9
SGMS1-205ENST00000498514 PRAMEF10O60809 474 aa3.21□□□□□ -1.9
SGMS1-205ENST00000498514 FKBP9O95302 570 aa3.21□□□□□ -1.9
SGMS1-205ENST00000498514 FCER1AP12319 257 aa3.21□□□□□ -1.9
SGMS1-205ENST00000498514 MPGP29372 298 aa3.21□□□□□ -1.9
SGMS1-205ENST00000498514 SLFN5Q08AF3 891 aa3.21□□□□□ -1.9
SGMS1-205ENST00000498514 PCBP1Q15365 356 aaKnown RBP eCLIP3.21□□□□□ -1.9
SGMS1-205ENST00000498514 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.21□□□□□ -1.9
SGMS1-205ENST00000498514 SLC18B1Q6NT16 456 aa3.21□□□□□ -1.9
SGMS1-205ENST00000498514 FKBP9P1Q75LS8 142 aa3.21□□□□□ -1.9
SGMS1-205ENST00000498514 CLNKQ7Z7G1 428 aa3.21□□□□□ -1.9
SGMS1-205ENST00000498514 ZDHHC17Q8IUH5 632 aa3.21□□□□□ -1.9
SGMS1-205ENST00000498514 SAMD14Q8IZD0 417 aaPredicted RBP3.21□□□□□ -1.9
SGMS1-205ENST00000498514 PMFBP1Q8TBY8 1022 aa3.21□□□□□ -1.9
SGMS1-205ENST00000498514 TBC1D15Q8TC07 691 aa3.21□□□□□ -1.9
SGMS1-205ENST00000498514 CASKIN2Q8WXE0 1202 aa3.21□□□□□ -1.9
SGMS1-205ENST00000498514 SLC5A5Q92911 643 aa3.21□□□□□ -1.9
SGMS1-205ENST00000498514 FATE1Q969F0 183 aa3.21□□□□□ -1.9
SGMS1-205ENST00000498514 HMCESQ96FZ2 354 aa3.21□□□□□ -1.9
SGMS1-205ENST00000498514 IGSF5Q9NSI5 407 aa3.21□□□□□ -1.9
SGMS1-205ENST00000498514 RBM12Q9NTZ6 932 aaKnown RBP3.21□□□□□ -1.9
SGMS1-205ENST00000498514 ELOVL5Q9NYP7 299 aa3.21□□□□□ -1.9
SGMS1-205ENST00000498514 WWOXQ9NZC7 414 aa3.21□□□□□ -1.9
SGMS1-205ENST00000498514 CDHR4A6H8M9 788 aa3.2□□□□□ -1.9
SGMS1-205ENST00000498514 TARM1B6A8C7 271 aa3.2□□□□□ -1.9
SGMS1-205ENST00000498514 PPP6CO00743 305 aa3.2□□□□□ -1.9
SGMS1-205ENST00000498514 TTLL1O95922 423 aa3.2□□□□□ -1.9
SGMS1-205ENST00000498514 FPR1P21462 350 aa3.2□□□□□ -1.9
SGMS1-205ENST00000498514 ADCYAP1R1P41586 468 aa3.2□□□□□ -1.9
SGMS1-205ENST00000498514 LAMB3Q13751 1172 aa3.2□□□□□ -1.9
SGMS1-205ENST00000498514 PDCD1Q15116 288 aa3.2□□□□□ -1.9
SGMS1-205ENST00000498514 FSCN1Q16658 493 aaKnown RBP3.2□□□□□ -1.9
SGMS1-205ENST00000498514 ZNF260Q3ZCT1 412 aa3.2□□□□□ -1.9
SGMS1-205ENST00000498514 CNNM4Q6P4Q7 775 aa3.2□□□□□ -1.9
SGMS1-205ENST00000498514 AHI1Q8N157 1196 aa3.2□□□□□ -1.9
SGMS1-205ENST00000498514 SYNPOQ8N3V7 929 aa3.2□□□□□ -1.9
SGMS1-205ENST00000498514 OR2W6PQ8NHA6 318 aa3.2□□□□□ -1.9
SGMS1-205ENST00000498514 MYCBPAPQ8TBZ2 947 aa3.2□□□□□ -1.9
SGMS1-205ENST00000498514 ADAMTS15Q8TE58 950 aa3.2□□□□□ -1.9
SGMS1-205ENST00000498514 HOXB13Q92826 284 aaPredicted RBP3.2□□□□□ -1.9
SGMS1-205ENST00000498514 QTRT1Q9BXR0 403 aaKnown RBP3.2□□□□□ -1.9
SGMS1-205ENST00000498514 GREM2Q9H772 168 aa3.2□□□□□ -1.9
SGMS1-205ENST00000498514 EMC7Q9NPA0 242 aa3.2□□□□□ -1.9
SGMS1-205ENST00000498514 NEU2Q9Y3R4 380 aa3.2□□□□□ -1.9
SGMS1-205ENST00000498514 ACTL7AQ9Y615 435 aa3.2□□□□□ -1.9
SGMS1-205ENST00000498514 TCRBV7S2A1N4TA0A589 114 aa3.19□□□□□ -1.9
SGMS1-205ENST00000498514 PRR23D1E9PI22 279 aaPredicted RBP3.19□□□□□ -1.9
SGMS1-205ENST00000498514 URI1O94763 535 aaPredicted RBP3.19□□□□□ -1.9
SGMS1-205ENST00000498514 TOP3BO95985 862 aaKnown RBP3.19□□□□□ -1.9
SGMS1-205ENST00000498514 HNRNPCP07910 306 aaKnown RBP eCLIP3.19□□□□□ -1.9
SGMS1-205ENST00000498514 PRR23D2P0DMB1 279 aaPredicted RBP3.19□□□□□ -1.9
SGMS1-205ENST00000498514 CYP2D6P10635 497 aa3.19□□□□□ -1.9
SGMS1-205ENST00000498514 KCNA2P16389 499 aa3.19□□□□□ -1.9
SGMS1-205ENST00000498514 PCSK1P29120 753 aa3.19□□□□□ -1.9
SGMS1-205ENST00000498514 CCKARP32238 428 aa3.19□□□□□ -1.9
SGMS1-205ENST00000498514 NR4A2P43354 598 aa3.19□□□□□ -1.9
SGMS1-205ENST00000498514 MMP13P45452 471 aa3.19□□□□□ -1.9
SGMS1-205ENST00000498514 PLCD1P51178 756 aa3.19□□□□□ -1.9
SGMS1-205ENST00000498514 NXPH1P58417 271 aa3.19□□□□□ -1.9
SGMS1-205ENST00000498514 CCT2P78371 535 aaKnown RBP3.19□□□□□ -1.9
SGMS1-205ENST00000498514 ADRM1Q16186 407 aa3.19□□□□□ -1.9
SGMS1-205ENST00000498514 CD300EQ496F6 205 aaPredicted RBP3.19□□□□□ -1.9
SGMS1-205ENST00000498514 MUM1L1Q5H9M0 696 aa3.19□□□□□ -1.9
SGMS1-205ENST00000498514 ZNF66Q6ZN08 573 aa3.19□□□□□ -1.9
SGMS1-205ENST00000498514 CAMKK1Q8N5S9 505 aa3.19□□□□□ -1.9
SGMS1-205ENST00000498514 CYFIP2Q96F07 1278 aa3.19□□□□□ -1.9
SGMS1-205ENST00000498514 ACAP3Q96P50 834 aa3.19□□□□□ -1.9
SGMS1-205ENST00000498514 FEZ1Q99689 392 aa3.19□□□□□ -1.9
SGMS1-205ENST00000498514 SH2D3AQ9BRG2 576 aa3.19□□□□□ -1.9
SGMS1-205ENST00000498514 SPRTNQ9H040 489 aaPredicted RBP3.19□□□□□ -1.9
SGMS1-205ENST00000498514 MTMR4Q9NYA4 1195 aa3.19□□□□□ -1.9
SGMS1-205ENST00000498514 SERGEFQ9UGK8 458 aa3.19□□□□□ -1.9
SGMS1-205ENST00000498514 SCOCQ9UIL1 159 aa3.19□□□□□ -1.9
SGMS1-205ENST00000498514 CDK11AQ9UQ88 783 aaPredicted RBP3.19□□□□□ -1.9
SGMS1-205ENST00000498514 PCDHB1Q9Y5F3 818 aa3.19□□□□□ -1.9
SGMS1-205ENST00000498514 CCDC187A0A096LP49 1063 aa3.18□□□□□ -1.9
SGMS1-205ENST00000498514 WDR27A2RRH5 827 aa3.18□□□□□ -1.9
SGMS1-205ENST00000498514 KIAA0391O15091 583 aaKnown RBP3.18□□□□□ -1.9
SGMS1-205ENST00000498514 ENDOD1O94919 500 aa3.18□□□□□ -1.9
SGMS1-205ENST00000498514 PPP3CBP16298 524 aa3.18□□□□□ -1.9
SGMS1-205ENST00000498514 ENPP1P22413 925 aa3.18□□□□□ -1.9
SGMS1-205ENST00000498514 CCT8P50990 548 aa3.18□□□□□ -1.9
SGMS1-205ENST00000498514 MRPS9P82933 396 aaKnown RBP3.18□□□□□ -1.9
SGMS1-205ENST00000498514 ITIH3Q06033 890 aa3.18□□□□□ -1.9
SGMS1-205ENST00000498514 DYRK1AQ13627 763 aa3.18□□□□□ -1.9
SGMS1-205ENST00000498514 SEPT7Q16181 437 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms