RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 TRIM59Q8IWR1 403 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 COLGALT2Q8IYK4 626 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 TMEM130Q8N3G9 435 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 CCDC150Q8NCX0 1101 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 HASPINQ8TF76 798 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 ZNF516Q92618 1163 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 BORCS6Q96GS4 357 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 TUBGCP2Q9BSJ2 902 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 COL25A1Q9BXS0 654 aaPredicted RBP12.35□□□□□ -0.43
CTTN-208ENST00000498223 VPS16Q9H269 839 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 TAB2Q9NYJ8 693 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 ITGA11Q9UKX5 1188 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 NUB1Q9Y5A7 615 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 CARNS1A5YM72 827 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 B4GALT3O60512 393 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 TADA2AO75478 443 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 B3GAT3O94766 335 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 SERPINC1P01008 464 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 GALTP07902 379 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 GTF2H1P32780 548 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 MARSP56192 900 aaKnown RBP12.34□□□□□ -0.43
CTTN-208ENST00000498223 RBP5P82980 135 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 PLCB2Q00722 1185 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 MYL7Q01449 175 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 PPP3CAQ08209 521 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 MYO1EQ12965 1108 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 NAB2Q15742 525 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 FILIP1LQ4L180 1135 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 CDKAL1Q5VV42 579 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 C9orf57Q5W0N0 161 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 KRT39Q6A163 491 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 DCLRE1AQ6PJP8 1040 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 SV2AQ7L0J3 742 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 C1orf127Q8N9H9 656 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 SP7Q8TDD2 431 aaPredicted RBP12.34□□□□□ -0.43
CTTN-208ENST00000498223 SLC35C1Q96A29 364 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 TMEM169Q96HH4 297 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 ZNF560Q96MR9 790 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 TGS1Q96RS0 853 aaKnown RBP12.34□□□□□ -0.43
CTTN-208ENST00000498223 GAS2L1Q99501 681 aaPredicted RBP12.34□□□□□ -0.43
CTTN-208ENST00000498223 PAAF1Q9BRP4 392 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 IMPG2Q9BZV3 1241 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 CERS4Q9HA82 394 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 TMEM8AQ9HCN3 771 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.34□□□□□ -0.432e-6■■■■■ 40.7
CTTN-208ENST00000498223 SPG21Q9NZD8 308 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 VWA8A3KMH1 1905 aa12.34□□□□□ -0.43
CTTN-208ENST00000498223 HLA-DRAP01903 254 aa12.33□□□□□ -0.44
CTTN-208ENST00000498223 C4BPAP04003 597 aaKnown RBP12.33□□□□□ -0.44
CTTN-208ENST00000498223 ATP1A3P13637 1013 aa12.33□□□□□ -0.44
CTTN-208ENST00000498223 LRPAP1P30533 357 aa12.33□□□□□ -0.44
CTTN-208ENST00000498223 PPM1AP35813 382 aa12.33□□□□□ -0.44
CTTN-208ENST00000498223 BMPR1AP36894 532 aa12.33□□□□□ -0.44
CTTN-208ENST00000498223 FMO5P49326 533 aa12.33□□□□□ -0.44
CTTN-208ENST00000498223 TAF6P49848 677 aa12.33□□□□□ -0.44
CTTN-208ENST00000498223 CLDN10P78369 228 aa12.33□□□□□ -0.44
CTTN-208ENST00000498223 TAP1Q03518 808 aa12.33□□□□□ -0.44
CTTN-208ENST00000498223 KRT17Q04695 432 aa12.33□□□□□ -0.44
CTTN-208ENST00000498223 NCOA4Q13772 614 aa12.33□□□□□ -0.44
CTTN-208ENST00000498223 KRT31Q15323 416 aa12.33□□□□□ -0.44
CTTN-208ENST00000498223 UPP1Q16831 310 aa12.33□□□□□ -0.44
CTTN-208ENST00000498223 WDR44Q5JSH3 913 aa12.33□□□□□ -0.44
CTTN-208ENST00000498223 C1orf220Q5T0J3 134 aa12.33□□□□□ -0.44
CTTN-208ENST00000498223 TDRD10Q5VZ19 366 aaKnown RBP12.33□□□□□ -0.44
CTTN-208ENST00000498223 DSTYKQ6XUX3 929 aa12.33□□□□□ -0.44
CTTN-208ENST00000498223 SAMD11Q96NU1 681 aa12.33□□□□□ -0.44
CTTN-208ENST00000498223 C17orf80Q9BSJ5 609 aa12.33□□□□□ -0.44
CTTN-208ENST00000498223 PRDM12Q9H4Q4 367 aa12.33□□□□□ -0.44
CTTN-208ENST00000498223 EYSQ5T1H1 3165 aa12.33□□□□□ -0.44
CTTN-208ENST00000498223 VCANP13611 3396 aa12.33□□□□□ -0.44
CTTN-208ENST00000498223 PPEF2O14830 753 aa12.32□□□□□ -0.44
CTTN-208ENST00000498223 TRAPPC3O43617 180 aa12.32□□□□□ -0.44
CTTN-208ENST00000498223 KIF4AO95239 1232 aa12.32□□□□□ -0.44
CTTN-208ENST00000498223 CA8P35219 290 aa12.32□□□□□ -0.44
CTTN-208ENST00000498223 PNPLA4P41247 253 aa12.32□□□□□ -0.44
CTTN-208ENST00000498223 COPB1P53618 953 aaKnown RBP12.32□□□□□ -0.44
CTTN-208ENST00000498223 MYL6P60660 151 aa12.32□□□□□ -0.44
CTTN-208ENST00000498223 ZNF699Q32M78 642 aa12.32□□□□□ -0.44
CTTN-208ENST00000498223 ZACNQ401N2 412 aa12.32□□□□□ -0.44
CTTN-208ENST00000498223 SV2CQ496J9 727 aa12.32□□□□□ -0.44
CTTN-208ENST00000498223 VWA3BQ502W6 1294 aa12.32□□□□□ -0.44
CTTN-208ENST00000498223 FKBP15Q5T1M5 1219 aa12.32□□□□□ -0.44
CTTN-208ENST00000498223 KLHL23Q8NBE8 558 aa12.32□□□□□ -0.44
CTTN-208ENST00000498223 FBXL13Q8NEE6 735 aa12.32□□□□□ -0.44
CTTN-208ENST00000498223 FBXO22Q8NEZ5 403 aa12.32□□□□□ -0.44
CTTN-208ENST00000498223 ARNTL2Q8WYA1 636 aa12.32□□□□□ -0.44
CTTN-208ENST00000498223 CLP1Q92989 425 aaKnown RBP12.32□□□□□ -0.44
CTTN-208ENST00000498223 IGSF21Q96ID5 467 aa12.32□□□□□ -0.44
CTTN-208ENST00000498223 HPDLQ96IR7 371 aa12.32□□□□□ -0.44
CTTN-208ENST00000498223 PCMTD1Q96MG8 357 aaPredicted RBP12.32□□□□□ -0.44
CTTN-208ENST00000498223 RBSNQ9H1K0 784 aa12.32□□□□□ -0.44
CTTN-208ENST00000498223 NDST4Q9H3R1 872 aa12.32□□□□□ -0.44
CTTN-208ENST00000498223 LIMA1Q9UHB6 759 aaKnown RBP12.32□□□□□ -0.44
CTTN-208ENST00000498223 PUF60Q9UHX1 559 aaKnown RBP12.32□□□□□ -0.44
CTTN-208ENST00000498223 SIX4Q9UIU6 781 aa12.32□□□□□ -0.44
CTTN-208ENST00000498223 ADAM28Q9UKQ2 775 aa12.32□□□□□ -0.44
CTTN-208ENST00000498223 ANO9A1A5B4 782 aa12.31□□□□□ -0.44
CTTN-208ENST00000498223 F8W810 466 aa12.31□□□□□ -0.44
CTTN-208ENST00000498223 I3L4J1 428 aa12.31□□□□□ -0.44
CTTN-208ENST00000498223 PIRO00625 290 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms