RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 CNTN3Q9P232 1028 aa23.82■■□□□ 1.4
CLIC4-204ENST00000497755 NUB1Q9Y5A7 615 aa23.82■■□□□ 1.4
CLIC4-204ENST00000497755 PHLPP2Q6ZVD8 1323 aa23.82■■□□□ 1.4
CLIC4-204ENST00000497755 ACACBO00763 2458 aa23.82■■□□□ 1.4
CLIC4-204ENST00000497755 MCF2P10911 925 aa23.81■■□□□ 1.4
CLIC4-204ENST00000497755 SDHBP21912 280 aa23.81■■□□□ 1.4
CLIC4-204ENST00000497755 NBR1Q14596 966 aa23.81■■□□□ 1.4
CLIC4-204ENST00000497755 CTXN3Q4LDR2 81 aa23.81■■□□□ 1.4
CLIC4-204ENST00000497755 IRF7Q92985 503 aa23.81■■□□□ 1.4
CLIC4-204ENST00000497755 SUSD3Q96L08 255 aa23.81■■□□□ 1.4
CLIC4-204ENST00000497755 TCHPQ9BT92 498 aa23.81■■□□□ 1.4
CLIC4-204ENST00000497755 CHRDQ9H2X0 955 aa23.81■■□□□ 1.4
CLIC4-204ENST00000497755 ZNF334Q9HCZ1 680 aaPredicted RBP23.81■■□□□ 1.4
CLIC4-204ENST00000497755 TRPV5Q9NQA5 729 aa23.81■■□□□ 1.4
CLIC4-204ENST00000497755 CEP72Q9P209 647 aa23.81■■□□□ 1.4
CLIC4-204ENST00000497755 E9PMD0 336 aa23.8■■□□□ 1.4
CLIC4-204ENST00000497755 HIP1RO75146 1068 aa23.8■■□□□ 1.4
CLIC4-204ENST00000497755 PSMC3P17980 439 aa23.8■■□□□ 1.4
CLIC4-204ENST00000497755 VIPR2P41587 438 aa23.8■■□□□ 1.4
CLIC4-204ENST00000497755 VITQ6UXI7 678 aa23.8■■□□□ 1.4
CLIC4-204ENST00000497755 SMARCD2Q92925 531 aa23.8■■□□□ 1.4
CLIC4-204ENST00000497755 ZBTB45Q96K62 511 aaPredicted RBP23.8■■□□□ 1.4
CLIC4-204ENST00000497755 ZNF512Q96ME7 567 aaPredicted RBP23.8■■□□□ 1.4
CLIC4-204ENST00000497755 LMAN1LQ9HAT1 526 aa23.8■■□□□ 1.4
CLIC4-204ENST00000497755 AFF4Q9UHB7 1163 aaKnown RBP23.8■■□□□ 1.4
CLIC4-204ENST00000497755 RBM19Q9Y4C8 960 aaKnown RBP23.8■■□□□ 1.4
CLIC4-204ENST00000497755 PRR5-ARHGAP8B1AHC4 643 aa23.79■■□□□ 1.4
CLIC4-204ENST00000497755 GDI1P31150 447 aa23.79■■□□□ 1.4
CLIC4-204ENST00000497755 TRAPPC10P48553 1259 aa23.79■■□□□ 1.4
CLIC4-204ENST00000497755 ARHGAP8P85298 464 aa23.79■■□□□ 1.4
CLIC4-204ENST00000497755 TWF1Q12792 350 aa23.79■■□□□ 1.4
CLIC4-204ENST00000497755 MAPK7Q13164 816 aa23.79■■□□□ 1.4
CLIC4-204ENST00000497755 DMP1Q13316 513 aaPredicted RBP23.79■■□□□ 1.4
CLIC4-204ENST00000497755 IQCEQ6IPM2 695 aa23.79■■□□□ 1.4
CLIC4-204ENST00000497755 MPZL3Q6UWV2 235 aa23.79■■□□□ 1.4
CLIC4-204ENST00000497755 IGSF22Q8N9C0 903 aa23.79■■□□□ 1.4
CLIC4-204ENST00000497755 FBXO18Q8NFZ0 1043 aa23.79■■□□□ 1.4
CLIC4-204ENST00000497755 SNX29Q8TEQ0 813 aa23.79■■□□□ 1.4
CLIC4-204ENST00000497755 FAM3CQ92520 227 aa23.79■■□□□ 1.4
CLIC4-204ENST00000497755 DDX12PQ92771 950 aa23.79■■□□□ 1.4
CLIC4-204ENST00000497755 TBC1D32Q96NH3 1257 aa23.79■■□□□ 1.4
CLIC4-204ENST00000497755 PARD6AQ9NPB6 346 aa23.79■■□□□ 1.4
CLIC4-204ENST00000497755 KMT5AQ9NQR1 393 aa23.79■■□□□ 1.4
CLIC4-204ENST00000497755 MAFFQ9ULX9 164 aa23.79■■□□□ 1.4
CLIC4-204ENST00000497755 DNM3Q9UQ16 869 aa23.79■■□□□ 1.4
CLIC4-204ENST00000497755 GJA1P17302 382 aa23.78■■□□□ 1.4
CLIC4-204ENST00000497755 EPHA5P54756 1037 aa23.78■■□□□ 1.4
CLIC4-204ENST00000497755 NRLP54845 237 aa23.78■■□□□ 1.4
CLIC4-204ENST00000497755 LMNB2Q03252 620 aa23.78■■□□□ 1.4
CLIC4-204ENST00000497755 SLC10A6Q3KNW5 377 aa23.78■■□□□ 1.4
CLIC4-204ENST00000497755 RINT1Q6NUQ1 792 aa23.78■■□□□ 1.4
CLIC4-204ENST00000497755 RNF19BQ6ZMZ0 732 aa23.78■■□□□ 1.4
CLIC4-204ENST00000497755 C1orf186Q6ZWK4 172 aa23.78■■□□□ 1.4
CLIC4-204ENST00000497755 ELMOD1Q8N336 334 aa23.78■■□□□ 1.4
CLIC4-204ENST00000497755 NTPCRQ9BSD7 190 aaKnown RBP23.78■■□□□ 1.4
CLIC4-204ENST00000497755 RUSC1Q9BVN2 902 aa23.78■■□□□ 1.4
CLIC4-204ENST00000497755 TRPV4Q9HBA0 871 aa23.78■■□□□ 1.4
CLIC4-204ENST00000497755 COL4A2P08572 1712 aa23.78■■□□□ 1.4
CLIC4-204ENST00000497755 TICRRQ7Z2Z1 1910 aa23.77■■□□□ 1.4
CLIC4-204ENST00000497755 SFI1A8K8P3 1242 aa23.77■■□□□ 1.4
CLIC4-204ENST00000497755 MYL4P12829 197 aa23.77■■□□□ 1.4
CLIC4-204ENST00000497755 MCM4P33991 863 aa23.77■■□□□ 1.4
CLIC4-204ENST00000497755 PTGDRQ13258 359 aa23.77■■□□□ 1.4
CLIC4-204ENST00000497755 CCDC83Q8IWF9 413 aa23.77■■□□□ 1.4
CLIC4-204ENST00000497755 APPL2Q8NEU8 664 aa23.77■■□□□ 1.4
CLIC4-204ENST00000497755 ZSCAN18Q8TBC5 510 aaPredicted RBP23.77■■□□□ 1.4
CLIC4-204ENST00000497755 LLPHQ9BRT6 129 aaKnown RBP23.77■■□□□ 1.4
CLIC4-204ENST00000497755 USP18Q9UMW8 372 aa23.77■■□□□ 1.4
CLIC4-204ENST00000497755 STK24Q9Y6E0 443 aa23.77■■□□□ 1.4
CLIC4-204ENST00000497755 PIAS3Q9Y6X2 628 aa23.77■■□□□ 1.4
CLIC4-204ENST00000497755 NCANO14594 1321 aa23.77■■□□□ 1.4
CLIC4-204ENST00000497755 PP2D1A8MPX8 630 aa23.76■■□□□ 1.39
CLIC4-204ENST00000497755 SLC16A4O15374 487 aa23.76■■□□□ 1.39
CLIC4-204ENST00000497755 HARSP12081 509 aaKnown RBP23.76■■□□□ 1.39
CLIC4-204ENST00000497755 TOB1P50616 345 aaPredicted RBP23.76■■□□□ 1.39
CLIC4-204ENST00000497755 IL17AQ16552 155 aa23.76■■□□□ 1.39
CLIC4-204ENST00000497755 SEZ6Q53EL9 994 aa23.76■■□□□ 1.39
CLIC4-204ENST00000497755 ZNF280DQ6N043 979 aa23.76■■□□□ 1.39
CLIC4-204ENST00000497755 MFSD6LQ8IWD5 586 aa23.76■■□□□ 1.39
CLIC4-204ENST00000497755 TMEM130Q8N3G9 435 aa23.76■■□□□ 1.39
CLIC4-204ENST00000497755 LEMD2Q8NC56 503 aa23.76■■□□□ 1.39
CLIC4-204ENST00000497755 DEPDC1BQ8WUY9 529 aa23.76■■□□□ 1.39
CLIC4-204ENST00000497755 DRC1Q96MC2 740 aa23.76■■□□□ 1.39
CLIC4-204ENST00000497755 CNTNAP3BQ96NU0 1288 aa23.76■■□□□ 1.39
CLIC4-204ENST00000497755 IER2Q9BTL4 223 aa23.76■■□□□ 1.39
CLIC4-204ENST00000497755 CNTNAP3Q9BZ76 1288 aa23.76■■□□□ 1.39
CLIC4-204ENST00000497755 C17orf75Q9HAS0 396 aa23.76■■□□□ 1.39
CLIC4-204ENST00000497755 PCDHB8Q9UN66 801 aa23.76■■□□□ 1.39
CLIC4-204ENST00000497755 LIMCH1Q9UPQ0 1083 aa23.76■■□□□ 1.39
CLIC4-204ENST00000497755 PDCD11Q14690 1871 aaKnown RBP23.75■■□□□ 1.39
CLIC4-204ENST00000497755 ARNTLO00327 626 aa23.75■■□□□ 1.39
CLIC4-204ENST00000497755 ZNF263O14978 683 aa23.75■■□□□ 1.39
CLIC4-204ENST00000497755 CHRNB1P11230 501 aa23.75■■□□□ 1.39
CLIC4-204ENST00000497755 CDC25AP30304 524 aa23.75■■□□□ 1.39
CLIC4-204ENST00000497755 TEAD2Q15562 447 aa23.75■■□□□ 1.39
CLIC4-204ENST00000497755 KCNK18Q7Z418 384 aa23.75■■□□□ 1.39
CLIC4-204ENST00000497755 CELF5Q8N6W0 485 aaKnown RBP23.75■■□□□ 1.39
CLIC4-204ENST00000497755 BEST2Q8NFU1 509 aa23.75■■□□□ 1.39
CLIC4-204ENST00000497755 LRRC3Q9BY71 257 aa23.75■■□□□ 1.39
CLIC4-204ENST00000497755 ASAH2Q9NR71 780 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms