RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 DUSP9Q99956 384 aaKnown RBP17.53■□□□□ 0.4
FAM3A-220ENST00000497506 MTMR12Q9C0I1 747 aa17.53■□□□□ 0.4
FAM3A-220ENST00000497506 TMEM63CQ9P1W3 806 aa17.53■□□□□ 0.4
FAM3A-220ENST00000497506 CTNND2Q9UQB3 1225 aa17.53■□□□□ 0.4
FAM3A-220ENST00000497506 C2orf71A6NGG8 1288 aa17.52■□□□□ 0.4
FAM3A-220ENST00000497506 CETN3O15182 167 aa17.52■□□□□ 0.4
FAM3A-220ENST00000497506 TRAPPC3O43617 180 aa17.52■□□□□ 0.4
FAM3A-220ENST00000497506 FGFR3P22607 806 aa17.52■□□□□ 0.4
FAM3A-220ENST00000497506 PSMC2P35998 433 aaKnown RBP17.52■□□□□ 0.4
FAM3A-220ENST00000497506 GLUD2P49448 558 aa17.52■□□□□ 0.4
FAM3A-220ENST00000497506 AARSP49588 968 aaKnown RBP eCLIP17.52■□□□□ 0.4
FAM3A-220ENST00000497506 NLRP12P59046 1061 aa17.52■□□□□ 0.4
FAM3A-220ENST00000497506 MCCD1P59942 119 aaPredicted RBP17.52■□□□□ 0.4
FAM3A-220ENST00000497506 DLG4P78352 724 aa17.52■□□□□ 0.4
FAM3A-220ENST00000497506 FKBP3Q00688 224 aaKnown RBP17.52■□□□□ 0.4
FAM3A-220ENST00000497506 DSG1Q02413 1049 aa17.52■□□□□ 0.4
FAM3A-220ENST00000497506 PAK1Q13153 545 aa17.52■□□□□ 0.4
FAM3A-220ENST00000497506 DUOXA2Q1HG44 320 aa17.52■□□□□ 0.4
FAM3A-220ENST00000497506 RTP2Q5QGT7 225 aa17.52■□□□□ 0.4
FAM3A-220ENST00000497506 CCDC183Q5T5S1 534 aa17.52■□□□□ 0.4
FAM3A-220ENST00000497506 FAM186BQ8IYM0 893 aa17.52■□□□□ 0.4
FAM3A-220ENST00000497506 MLKLQ8NB16 471 aa17.52■□□□□ 0.4
FAM3A-220ENST00000497506 TMC2Q8TDI7 906 aa17.52■□□□□ 0.4
FAM3A-220ENST00000497506 PPM1EQ8WY54 764 aa17.52■□□□□ 0.4
FAM3A-220ENST00000497506 BORCS6Q96GS4 357 aa17.52■□□□□ 0.4
FAM3A-220ENST00000497506 SUSD3Q96L08 255 aa17.52■□□□□ 0.4
FAM3A-220ENST00000497506 FNBP1Q96RU3 617 aa17.52■□□□□ 0.4
FAM3A-220ENST00000497506 MKNK1Q9BUB5 465 aa17.52■□□□□ 0.4
FAM3A-220ENST00000497506 SIX4Q9UIU6 781 aa17.52■□□□□ 0.4
FAM3A-220ENST00000497506 NUB1Q9Y5A7 615 aa17.52■□□□□ 0.4
FAM3A-220ENST00000497506 LRRIQ3A6PVS8 624 aaPredicted RBP17.51■□□□□ 0.39
FAM3A-220ENST00000497506 SPTLC1O15269 473 aa17.51■□□□□ 0.39
FAM3A-220ENST00000497506 ITGB3P05106 788 aa17.51■□□□□ 0.39
FAM3A-220ENST00000497506 URODP06132 367 aa17.51■□□□□ 0.39
FAM3A-220ENST00000497506 TMEM191BP0C7N4 346 aa17.51■□□□□ 0.39
FAM3A-220ENST00000497506 TNNI1P19237 187 aa17.51■□□□□ 0.39
FAM3A-220ENST00000497506 GTF2F1P35269 517 aaKnown RBP eCLIP17.51■□□□□ 0.39
FAM3A-220ENST00000497506 STX17P56962 302 aa17.51■□□□□ 0.39
FAM3A-220ENST00000497506 LILRA4P59901 499 aa17.51■□□□□ 0.39
FAM3A-220ENST00000497506 HYAL1Q12794 435 aa17.51■□□□□ 0.39
FAM3A-220ENST00000497506 BMS1Q14692 1282 aaKnown RBP17.51■□□□□ 0.39
FAM3A-220ENST00000497506 DPCR1Q3MIW9 517 aa17.51■□□□□ 0.39
FAM3A-220ENST00000497506 C1orf220Q5T0J3 134 aa17.51■□□□□ 0.39
FAM3A-220ENST00000497506 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.51■□□□□ 0.39
FAM3A-220ENST00000497506 GPR65Q8IYL9 337 aa17.51■□□□□ 0.39
FAM3A-220ENST00000497506 CSGALNACT2Q8N6G5 542 aa17.51■□□□□ 0.39
FAM3A-220ENST00000497506 ANKRD36BP1Q96IX9 119 aa17.51■□□□□ 0.39
FAM3A-220ENST00000497506 MED15Q96RN5 788 aa17.51■□□□□ 0.39
FAM3A-220ENST00000497506 TTPALQ9BTX7 342 aa17.51■□□□□ 0.39
FAM3A-220ENST00000497506 MRPL17Q9NRX2 175 aaKnown RBP17.51■□□□□ 0.39
FAM3A-220ENST00000497506 ITGA11Q9UKX5 1188 aa17.51■□□□□ 0.39
FAM3A-220ENST00000497506 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.5■□□□□ 0.39
FAM3A-220ENST00000497506 BICDL2A1A5D9 508 aa17.5■□□□□ 0.39
FAM3A-220ENST00000497506 M0QZQ0 153 aa17.5■□□□□ 0.39
FAM3A-220ENST00000497506 C2CD2LO14523 706 aa17.5■□□□□ 0.39
FAM3A-220ENST00000497506 PER2O15055 1255 aa17.5■□□□□ 0.39
FAM3A-220ENST00000497506 TNNC2P02585 160 aa17.5■□□□□ 0.39
FAM3A-220ENST00000497506 TKTP29401 623 aaKnown RBP17.5■□□□□ 0.39
FAM3A-220ENST00000497506 POLR2BP30876 1174 aaKnown RBP17.5■□□□□ 0.39
FAM3A-220ENST00000497506 NRIP1P48552 1158 aa17.5■□□□□ 0.39
FAM3A-220ENST00000497506 KIAA1841Q6NSI8 718 aa17.5■□□□□ 0.39
FAM3A-220ENST00000497506 INTS8Q75QN2 995 aaKnown RBP17.5■□□□□ 0.39
FAM3A-220ENST00000497506 TRAPPC11Q7Z392 1133 aa17.5■□□□□ 0.39
FAM3A-220ENST00000497506 RBM23Q86U06 439 aaKnown RBP17.5■□□□□ 0.39
FAM3A-220ENST00000497506 CEP57Q86XR8 500 aa17.5■□□□□ 0.39
FAM3A-220ENST00000497506 RIN2Q8WYP3 895 aaPredicted RBP17.5■□□□□ 0.39
FAM3A-220ENST00000497506 TLE6Q9H808 572 aa17.5■□□□□ 0.39
FAM3A-220ENST00000497506 RXFP1Q9HBX9 757 aa17.5■□□□□ 0.39
FAM3A-220ENST00000497506 RWDD2AQ9UIY3 292 aa17.5■□□□□ 0.39
FAM3A-220ENST00000497506 AGAP1Q9UPQ3 857 aa17.5■□□□□ 0.39
FAM3A-220ENST00000497506 SSX2IPQ9Y2D8 614 aa17.5■□□□□ 0.39
FAM3A-220ENST00000497506 BRWD1Q9NSI6 2320 aa17.5■□□□□ 0.39
FAM3A-220ENST00000497506 SYN3O14994 580 aa17.49■□□□□ 0.39
FAM3A-220ENST00000497506 SLC16A3O15427 465 aaKnown RBP17.49■□□□□ 0.39
FAM3A-220ENST00000497506 CNPP09543 421 aaKnown RBP17.49■□□□□ 0.39
FAM3A-220ENST00000497506 PTMSP20962 102 aa17.49■□□□□ 0.39
FAM3A-220ENST00000497506 PAX3P23760 479 aa17.49■□□□□ 0.39
FAM3A-220ENST00000497506 CA8P35219 290 aa17.49■□□□□ 0.39
FAM3A-220ENST00000497506 TAF6P49848 677 aa17.49■□□□□ 0.39
FAM3A-220ENST00000497506 VAMP7P51809 220 aa17.49■□□□□ 0.39
FAM3A-220ENST00000497506 RBP5P82980 135 aa17.49■□□□□ 0.39
FAM3A-220ENST00000497506 ENPEPQ07075 957 aa17.49■□□□□ 0.39
FAM3A-220ENST00000497506 BFSP1Q12934 665 aa17.49■□□□□ 0.39
FAM3A-220ENST00000497506 COL19A1Q14993 1142 aa17.49■□□□□ 0.39
FAM3A-220ENST00000497506 DUSP6Q16828 381 aa17.49■□□□□ 0.39
FAM3A-220ENST00000497506 KLHL40Q2TBA0 621 aa17.49■□□□□ 0.39
FAM3A-220ENST00000497506 PRSS55Q6UWB4 352 aaPredicted RBP17.49■□□□□ 0.39
FAM3A-220ENST00000497506 FILIP1Q7Z7B0 1213 aa17.49■□□□□ 0.39
FAM3A-220ENST00000497506 LNX1Q8TBB1 728 aaPredicted RBP17.49■□□□□ 0.39
FAM3A-220ENST00000497506 PIK3R5Q8WYR1 880 aa17.49■□□□□ 0.39
FAM3A-220ENST00000497506 PPP2R3CQ969Q6 453 aa17.49■□□□□ 0.39
FAM3A-220ENST00000497506 CEP63Q96MT8 703 aa17.49■□□□□ 0.39
FAM3A-220ENST00000497506 KLHL5Q96PQ7 755 aa17.49■□□□□ 0.39
FAM3A-220ENST00000497506 PCDHB8Q9UN66 801 aa17.49■□□□□ 0.39
FAM3A-220ENST00000497506 IKBKBO14920 756 aa17.48■□□□□ 0.39
FAM3A-220ENST00000497506 CLASP2O75122 1294 aaKnown RBP17.48■□□□□ 0.39
FAM3A-220ENST00000497506 CST3P01034 146 aaPredicted RBP17.48■□□□□ 0.39
FAM3A-220ENST00000497506 C4BPAP04003 597 aaKnown RBP17.48■□□□□ 0.39
FAM3A-220ENST00000497506 KRT19P08727 400 aa17.48■□□□□ 0.39
FAM3A-220ENST00000497506 EPB41P11171 864 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms