RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 ATP5BP06576 529 aaKnown RBP13.74□□□□□ -0.21
VEGFA-215ENST00000497139 GCAP28676 217 aa13.74□□□□□ -0.21
VEGFA-215ENST00000497139 IRX4P78413 519 aa13.74□□□□□ -0.21
VEGFA-215ENST00000497139 ZBTB16Q05516 673 aa13.74□□□□□ -0.21
VEGFA-215ENST00000497139 SLC1A5Q15758 541 aa13.74□□□□□ -0.21
VEGFA-215ENST00000497139 SCUBE1Q8IWY4 988 aa13.74□□□□□ -0.21
VEGFA-215ENST00000497139 ZCCHC9Q8N567 271 aaKnown RBP13.74□□□□□ -0.21
VEGFA-215ENST00000497139 SLC35B4Q969S0 331 aa13.74□□□□□ -0.21
VEGFA-215ENST00000497139 FAM161BQ96MY7 647 aa13.74□□□□□ -0.21
VEGFA-215ENST00000497139 BTBD9Q96Q07 612 aa13.74□□□□□ -0.21
VEGFA-215ENST00000497139 TAS2R14Q9NYV8 317 aa13.74□□□□□ -0.21
VEGFA-215ENST00000497139 APEX2Q9UBZ4 518 aa13.74□□□□□ -0.21
VEGFA-215ENST00000497139 SNAP23O00161 211 aa13.73□□□□□ -0.21
VEGFA-215ENST00000497139 SPOPO43791 374 aa13.73□□□□□ -0.21
VEGFA-215ENST00000497139 HARSP12081 509 aaKnown RBP13.73□□□□□ -0.21
VEGFA-215ENST00000497139 KRT15P19012 456 aa13.73□□□□□ -0.21
VEGFA-215ENST00000497139 AMPD1P23109 780 aa13.73□□□□□ -0.21
VEGFA-215ENST00000497139 ADCY8P40145 1251 aa13.73□□□□□ -0.21
VEGFA-215ENST00000497139 MAGEA4P43358 317 aa13.73□□□□□ -0.21
VEGFA-215ENST00000497139 ACADVLP49748 655 aa13.73□□□□□ -0.21
VEGFA-215ENST00000497139 CHN2P52757 468 aa13.73□□□□□ -0.21
VEGFA-215ENST00000497139 MESDQ14696 234 aa13.73□□□□□ -0.21
VEGFA-215ENST00000497139 DLGAP5Q15398 846 aa13.73□□□□□ -0.21
VEGFA-215ENST00000497139 TBCCQ15814 346 aa13.73□□□□□ -0.21
VEGFA-215ENST00000497139 OLFML2BQ68BL8 750 aa13.73□□□□□ -0.21
VEGFA-215ENST00000497139 LVRNQ6Q4G3 990 aa13.73□□□□□ -0.21
VEGFA-215ENST00000497139 RASSF3Q86WH2 238 aa13.73□□□□□ -0.21
VEGFA-215ENST00000497139 ALKBH8Q96BT7 664 aaKnown RBP13.73□□□□□ -0.21
VEGFA-215ENST00000497139 ZFRQ96KR1 1074 aaKnown RBP13.73□□□□□ -0.21
VEGFA-215ENST00000497139 PRICKLE1Q96MT3 831 aaPredicted RBP13.73□□□□□ -0.21
VEGFA-215ENST00000497139 EBF3Q9H4W6 596 aa13.73□□□□□ -0.21
VEGFA-215ENST00000497139 MKNK2Q9HBH9 465 aa13.73□□□□□ -0.21
VEGFA-215ENST00000497139 THEGQ9P2T0 379 aa13.73□□□□□ -0.21
VEGFA-215ENST00000497139 BARX2Q9UMQ3 279 aaPredicted RBP13.73□□□□□ -0.21
VEGFA-215ENST00000497139 NUMBLQ9Y6R0 609 aa13.73□□□□□ -0.21
VEGFA-215ENST00000497139 GSTTP1A0A1W2PQM5 241 aa13.73□□□□□ -0.21
VEGFA-215ENST00000497139 WDR46O15213 610 aaKnown RBP13.73□□□□□ -0.21
VEGFA-215ENST00000497139 FTLP02792 175 aaPredicted RBP13.73□□□□□ -0.21
VEGFA-215ENST00000497139 DLATP10515 647 aaKnown RBP13.73□□□□□ -0.21
VEGFA-215ENST00000497139 BCRP11274 1271 aa13.73□□□□□ -0.21
VEGFA-215ENST00000497139 GZMAP12544 262 aa13.73□□□□□ -0.21
VEGFA-215ENST00000497139 ADCY7P51828 1080 aa13.73□□□□□ -0.21
VEGFA-215ENST00000497139 RAB15P59190 212 aa13.73□□□□□ -0.21
VEGFA-215ENST00000497139 DDB1Q16531 1140 aa13.73□□□□□ -0.21
VEGFA-215ENST00000497139 SATL1Q86VE3 508 aa13.73□□□□□ -0.21
VEGFA-215ENST00000497139 CROCCP3Q8IVE0 287 aa13.73□□□□□ -0.21
VEGFA-215ENST00000497139 NUP93Q8N1F7 819 aa13.73□□□□□ -0.21
VEGFA-215ENST00000497139 PSPC1Q8WXF1 523 aaKnown RBP13.73□□□□□ -0.21
VEGFA-215ENST00000497139 MPHOSPH6Q99547 160 aaKnown RBP13.73□□□□□ -0.21
VEGFA-215ENST00000497139 POP1Q99575 1024 aaKnown RBP13.73□□□□□ -0.21
VEGFA-215ENST00000497139 RANBP17Q9H2T7 1088 aaKnown RBP13.73□□□□□ -0.21
VEGFA-215ENST00000497139 SEPT11Q9NVA2 429 aaKnown RBP13.73□□□□□ -0.21
VEGFA-215ENST00000497139 ARHGAP10A1A4S6 786 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 TOM1O60784 492 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 GRIA2P42262 883 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 FMO5P49326 533 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 SLC12A3P55017 1021 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 GEMIN4P57678 1058 aaKnown RBP13.72□□□□□ -0.21
VEGFA-215ENST00000497139 PPP1R18Q6NYC8 613 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 BORAQ6PGQ7 559 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 C1orf228Q6PIY5 440 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 RIPOR1Q6ZS17 1223 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 RFWD2Q8NHY2 731 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 FAM172AQ8WUF8 416 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 NMD3Q96D46 503 aaKnown RBP13.72□□□□□ -0.21
VEGFA-215ENST00000497139 SLAIN2Q9P270 581 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 PSMC3IPQ9P2W1 217 aaPredicted RBP13.72□□□□□ -0.21
VEGFA-215ENST00000497139 UVRAGQ9P2Y5 699 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 DMTF1Q9Y222 760 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 NEU2Q9Y3R4 380 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 ASTN1O14525 1302 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 TMEM110-MUSTN1A8MSY1 372 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 HOXD13P35453 343 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 PSMC2P35998 433 aaKnown RBP13.72□□□□□ -0.21
VEGFA-215ENST00000497139 SPIDRQ14159 915 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 P3H1Q32P28 736 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 SLC44A4Q53GD3 710 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 CCDC92Q53HC0 331 aaPredicted RBP13.72□□□□□ -0.21
VEGFA-215ENST00000497139 RBM26Q5T8P6 1007 aaKnown RBP13.72□□□□□ -0.21
VEGFA-215ENST00000497139 CC2D2BQ6DHV5 1058 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 ZBED8Q8IZ13 594 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 NSUN4Q96CB9 384 aaKnown RBP13.72□□□□□ -0.21
VEGFA-215ENST00000497139 TMEM47Q9BQJ4 181 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 DCLK3Q9C098 648 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 C1orf21Q9H246 121 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 PCDHA12Q9UN75 941 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 KIAA1024Q9UPX6 916 aa13.72□□□□□ -0.21
VEGFA-215ENST00000497139 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.71□□□□□ -0.21
VEGFA-215ENST00000497139 E9PMD0 336 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 VILLO15195 856 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 RGL2O15211 777 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 PEX1O43933 1283 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 CDK4P11802 303 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 GTF2H1P32780 548 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 PKN2Q16513 984 aaKnown RBP13.71□□□□□ -0.21
VEGFA-215ENST00000497139 MAPK6Q16659 721 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 ANKRD20A4Q4UJ75 823 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 C12orf60Q5U649 245 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 NCCRP1Q6ZVX7 275 aaPredicted RBP13.71□□□□□ -0.21
VEGFA-215ENST00000497139 CENPUQ71F23 418 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms