RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 UMODL1Q5DID0 1318 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 SART1O43290 800 aaKnown RBP8.93□□□□□ -0.98
USP54-215ENST00000497106 TSPAN1O60635 241 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 RNF8O76064 485 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 MOCS3O95396 460 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 PGK1P00558 417 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 ITGB3P05106 788 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 CYP3A5P20815 502 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 MTF1Q14872 753 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 SNX17Q15036 470 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 CCDC50Q8IVM0 306 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 ZBTB45Q96K62 511 aaPredicted RBP8.93□□□□□ -0.98
USP54-215ENST00000497106 CARD6Q9BX69 1037 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 GJD2Q9UKL4 321 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 FTLP02792 175 aaPredicted RBP8.93□□□□□ -0.98
USP54-215ENST00000497106 INHAP05111 366 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 SETSIPP0DME0 302 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 VDRP11473 427 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 CST5P28325 142 aaPredicted RBP8.93□□□□□ -0.98
USP54-215ENST00000497106 GBP1P32455 592 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 HOXD13P35453 343 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 ARHGAP25P42331 645 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 TSPY1Q01534 308 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 GPR161Q8N6U8 529 aaKnown RBP8.93□□□□□ -0.98
USP54-215ENST00000497106 LRRC52Q8N7C0 313 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 USP6NLQ92738 828 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 VCPIP1Q96JH7 1222 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 CAPZA3Q96KX2 299 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 CFHR5Q9BXR6 569 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 CCDC113Q9H0I3 377 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 PDZD7Q9H5P4 517 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 PARVAQ9NVD7 372 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 NAGPAQ9UK23 515 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 GIT1Q9Y2X7 761 aa8.93□□□□□ -0.98
USP54-215ENST00000497106 LACTBL1A8MY62 500 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 FAM155AB1AL88 458 aaPredicted RBP8.92□□□□□ -0.98
USP54-215ENST00000497106 FOXN3O00409 490 aaPredicted RBP8.92□□□□□ -0.98
USP54-215ENST00000497106 CEP104O60308 925 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 ASGR1P07306 291 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 ITGA7Q13683 1181 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 SHC3Q92529 594 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 WNT8AQ9H1J5 351 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 HOMER3Q9NSC5 361 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 IP6K2Q9UHH9 426 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 TISP43B9A030 160 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 ZNF189O75820 626 aaPredicted RBP8.92□□□□□ -0.98
USP54-215ENST00000497106 CYP11B1P15538 503 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 ARF4P18085 180 aaPredicted RBP8.92□□□□□ -0.98
USP54-215ENST00000497106 PCSK1P29120 753 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 ACADSBP45954 432 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 KCNA10Q16322 511 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 ACAD10Q6JQN1 1059 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 RUBCNQ92622 972 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 BCAS3Q9H6U6 928 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 TMEM51Q9NW97 253 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 RBAK-RBAKDNI3L0D1 243 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 KCNK3O14649 394 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 TFRCP02786 760 aaKnown RBP8.92□□□□□ -0.98
USP54-215ENST00000497106 ADSSP30520 456 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 ACTN2P35609 894 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 CACNB2Q08289 660 aaPredicted RBP8.92□□□□□ -0.98
USP54-215ENST00000497106 C8orf74Q6P047 294 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 MAATS1Q7Z4T9 603 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 FAM71AQ8IYT1 594 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 GRK7Q8WTQ7 553 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 TRIB2Q92519 343 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 USP20Q9Y2K6 914 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 A0A1B0GUA9 196 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 USP27XA6NNY8 438 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 ELNP15502 786 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 ZNF564Q8TBZ8 553 aaPredicted RBP8.92□□□□□ -0.98
USP54-215ENST00000497106 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.92□□□□□ -0.98
USP54-215ENST00000497106 RABGGTAQ92696 567 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 APBB2Q92870 758 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 BORCS6Q96GS4 357 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 MAK16Q9BXY0 300 aaKnown RBP8.92□□□□□ -0.98
USP54-215ENST00000497106 ST7Q9NRC1 585 aa8.92□□□□□ -0.98
USP54-215ENST00000497106 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.92□□□□□ -0.98
USP54-215ENST00000497106 ADGRA3Q8IWK6 1321 aa8.91□□□□□ -0.98
USP54-215ENST00000497106 A8MXQ7 604 aa8.91□□□□□ -0.98
USP54-215ENST00000497106 PGRMC1O00264 195 aaKnown RBP8.91□□□□□ -0.98
USP54-215ENST00000497106 LCA5LO95447 670 aa8.91□□□□□ -0.98
USP54-215ENST00000497106 C4BPAP04003 597 aaKnown RBP8.91□□□□□ -0.98
USP54-215ENST00000497106 THP07101 528 aa8.91□□□□□ -0.98
USP54-215ENST00000497106 TNNT3P45378 269 aaPredicted RBP8.91□□□□□ -0.98
USP54-215ENST00000497106 GALCP54803 685 aa8.91□□□□□ -0.98
USP54-215ENST00000497106 DLG4P78352 724 aa8.91□□□□□ -0.98
USP54-215ENST00000497106 MAPRE1Q15691 268 aaKnown RBP8.91□□□□□ -0.98
USP54-215ENST00000497106 JADE1Q6IE81 842 aa8.91□□□□□ -0.98
USP54-215ENST00000497106 UNC93AQ86WB7 457 aa8.91□□□□□ -0.98
USP54-215ENST00000497106 ARHGEF19Q8IW93 802 aa8.91□□□□□ -0.98
USP54-215ENST00000497106 MAP7D3Q8IWC1 876 aa8.91□□□□□ -0.98
USP54-215ENST00000497106 SNTG2Q9NY99 539 aa8.91□□□□□ -0.98
USP54-215ENST00000497106 CCDC66A2RUB6 948 aa8.91□□□□□ -0.98
USP54-215ENST00000497106 CCDC188H7C350 402 aa8.91□□□□□ -0.98
USP54-215ENST00000497106 CLGNO14967 610 aa8.91□□□□□ -0.98
USP54-215ENST00000497106 PALMO75781 387 aa8.91□□□□□ -0.98
USP54-215ENST00000497106 ASS1P00966 412 aaKnown RBP8.91□□□□□ -0.98
USP54-215ENST00000497106 ODC1P11926 461 aa8.91□□□□□ -0.98
USP54-215ENST00000497106 PRLRP16471 622 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms