RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 FBXL13Q8NEE6 735 aa23.45■■□□□ 1.34
C9orf3-222ENST00000496567 CXorf38Q8TB03 319 aa23.45■■□□□ 1.34
C9orf3-222ENST00000496567 ZNF560Q96MR9 790 aa23.45■■□□□ 1.34
C9orf3-222ENST00000496567 PAAF1Q9BRP4 392 aa23.45■■□□□ 1.34
C9orf3-222ENST00000496567 PCDHB12Q9Y5F1 795 aa23.45■■□□□ 1.34
C9orf3-222ENST00000496567 GBF1Q92538 1859 aa23.44■■□□□ 1.34
C9orf3-222ENST00000496567 LINC01553A4QN01 128 aa23.44■■□□□ 1.34
C9orf3-222ENST00000496567 B3GAT3O94766 335 aa23.44■■□□□ 1.34
C9orf3-222ENST00000496567 PAX3P23760 479 aa23.44■■□□□ 1.34
C9orf3-222ENST00000496567 PIK3CAP42336 1068 aa23.44■■□□□ 1.34
C9orf3-222ENST00000496567 NCOA4Q13772 614 aa23.44■■□□□ 1.34
C9orf3-222ENST00000496567 LRIT3Q3SXY7 679 aa23.44■■□□□ 1.34
C9orf3-222ENST00000496567 FILIP1LQ4L180 1135 aa23.44■■□□□ 1.34
C9orf3-222ENST00000496567 COLGALT1Q8NBJ5 622 aa23.44■■□□□ 1.34
C9orf3-222ENST00000496567 CACNG4Q9UBN1 327 aa23.44■■□□□ 1.34
C9orf3-222ENST00000496567 YBX2Q9Y2T7 364 aaKnown RBP23.44■■□□□ 1.34
C9orf3-222ENST00000496567 PRG3Q9Y2Y8 225 aaPredicted RBP23.44■■□□□ 1.34
C9orf3-222ENST00000496567 COQ4Q9Y3A0 265 aa23.44■■□□□ 1.34
C9orf3-222ENST00000496567 RANBP2P49792 3224 aaKnown RBP23.44■■□□□ 1.34
C9orf3-222ENST00000496567 TMEM189-UBE2V1I3L0A0 370 aa23.44■■□□□ 1.34
C9orf3-222ENST00000496567 CST3P01034 146 aaPredicted RBP23.44■■□□□ 1.34
C9orf3-222ENST00000496567 HLA-DRAP01903 254 aa23.44■■□□□ 1.34
C9orf3-222ENST00000496567 ATICP31939 592 aa23.44■■□□□ 1.34
C9orf3-222ENST00000496567 PPM1AP35813 382 aa23.44■■□□□ 1.34
C9orf3-222ENST00000496567 PBX2P40425 430 aa23.44■■□□□ 1.34
C9orf3-222ENST00000496567 MYO1EQ12965 1108 aa23.44■■□□□ 1.34
C9orf3-222ENST00000496567 APTXQ7Z2E3 356 aaKnown RBP23.44■■□□□ 1.34
C9orf3-222ENST00000496567 TAS1R2Q8TE23 839 aa23.44■■□□□ 1.34
C9orf3-222ENST00000496567 SAMD11Q96NU1 681 aa23.44■■□□□ 1.34
C9orf3-222ENST00000496567 IMPG2Q9BZV3 1241 aa23.44■■□□□ 1.34
C9orf3-222ENST00000496567 GTPBP10A4D1E9 387 aaKnown RBP23.43■■□□□ 1.34
C9orf3-222ENST00000496567 VNN1O95497 513 aa23.43■■□□□ 1.34
C9orf3-222ENST00000496567 TAF6P49848 677 aa23.43■■□□□ 1.34
C9orf3-222ENST00000496567 FANCCQ00597 558 aa23.43■■□□□ 1.34
C9orf3-222ENST00000496567 SGSM1Q2NKQ1 1148 aa23.43■■□□□ 1.34
C9orf3-222ENST00000496567 FKBP15Q5T1M5 1219 aa23.43■■□□□ 1.34
C9orf3-222ENST00000496567 TMEM130Q8N3G9 435 aa23.43■■□□□ 1.34
C9orf3-222ENST00000496567 CCDC150Q8NCX0 1101 aa23.43■■□□□ 1.34
C9orf3-222ENST00000496567 RABGGTAQ92696 567 aa23.43■■□□□ 1.34
C9orf3-222ENST00000496567 RAB20Q9NX57 234 aa23.43■■□□□ 1.34
C9orf3-222ENST00000496567 NUB1Q9Y5A7 615 aa23.43■■□□□ 1.34
C9orf3-222ENST00000496567 LGALS16A8MUM7 142 aa23.42■■□□□ 1.34
C9orf3-222ENST00000496567 LINC00271P0C7V0 271 aa23.42■■□□□ 1.34
C9orf3-222ENST00000496567 BMPR1AP36894 532 aa23.42■■□□□ 1.34
C9orf3-222ENST00000496567 PBX3P40426 434 aa23.42■■□□□ 1.34
C9orf3-222ENST00000496567 SV2CQ496J9 727 aa23.42■■□□□ 1.34
C9orf3-222ENST00000496567 TAF4BQ92750 862 aa23.42■■□□□ 1.34
C9orf3-222ENST00000496567 HPDLQ96IR7 371 aa23.42■■□□□ 1.34
C9orf3-222ENST00000496567 PLVAPQ9BX97 442 aa23.42■■□□□ 1.34
C9orf3-222ENST00000496567 SPG21Q9NZD8 308 aa23.42■■□□□ 1.34
C9orf3-222ENST00000496567 ADAM28Q9UKQ2 775 aa23.42■■□□□ 1.34
C9orf3-222ENST00000496567 NT5C1B-RDH14C9J2C7 533 aa23.41■■□□□ 1.34
C9orf3-222ENST00000496567 PPEF2O14830 753 aa23.41■■□□□ 1.34
C9orf3-222ENST00000496567 TADA2AO75478 443 aa23.41■■□□□ 1.34
C9orf3-222ENST00000496567 KIF4AO95239 1232 aa23.41■■□□□ 1.34
C9orf3-222ENST00000496567 STAU1O95793 577 aaKnown RBP23.41■■□□□ 1.34
C9orf3-222ENST00000496567 LILRA4P59901 499 aa23.41■■□□□ 1.34
C9orf3-222ENST00000496567 MYL6P60660 151 aa23.41■■□□□ 1.34
C9orf3-222ENST00000496567 GSE1Q14687 1217 aa23.41■■□□□ 1.34
C9orf3-222ENST00000496567 UVSSAQ2YD98 709 aa23.41■■□□□ 1.34
C9orf3-222ENST00000496567 EPC2Q52LR7 807 aa23.41■■□□□ 1.34
C9orf3-222ENST00000496567 GBP6Q6ZN66 633 aa23.41■■□□□ 1.34
C9orf3-222ENST00000496567 SLC39A11Q8N1S5 342 aa23.41■■□□□ 1.34
C9orf3-222ENST00000496567 IGSF21Q96ID5 467 aa23.41■■□□□ 1.34
C9orf3-222ENST00000496567 TGS1Q96RS0 853 aaKnown RBP23.41■■□□□ 1.34
C9orf3-222ENST00000496567 NKX2-4Q9H2Z4 354 aa23.41■■□□□ 1.34
C9orf3-222ENST00000496567 SLC28A3Q9HAS3 691 aa23.41■■□□□ 1.34
C9orf3-222ENST00000496567 TRAPPC3O43617 180 aa23.4■■□□□ 1.34
C9orf3-222ENST00000496567 DNAJB2P25686 324 aa23.4■■□□□ 1.34
C9orf3-222ENST00000496567 CTNNB1P35222 781 aa23.4■■□□□ 1.34
C9orf3-222ENST00000496567 UBASH3AP57075 661 aa23.4■■□□□ 1.34
C9orf3-222ENST00000496567 TAP1Q03518 808 aa23.4■■□□□ 1.34
C9orf3-222ENST00000496567 ZNF699Q32M78 642 aa23.4■■□□□ 1.34
C9orf3-222ENST00000496567 WDR44Q5JSH3 913 aa23.4■■□□□ 1.34
C9orf3-222ENST00000496567 C3orf58Q8NDZ4 430 aa23.4■■□□□ 1.34
C9orf3-222ENST00000496567 TMEM169Q96HH4 297 aa23.4■■□□□ 1.34
C9orf3-222ENST00000496567 VRTNQ9H8Y1 702 aa23.4■■□□□ 1.34
C9orf3-222ENST00000496567 KIAA1671Q9BY89 1806 aa23.4■■□□□ 1.34
C9orf3-222ENST00000496567 A0A1B0GTH6 734 aa23.4■■□□□ 1.34
C9orf3-222ENST00000496567 CLSTN1O94985 981 aa23.4■■□□□ 1.34
C9orf3-222ENST00000496567 ASS1P00966 412 aaKnown RBP23.4■■□□□ 1.34
C9orf3-222ENST00000496567 RB1P06400 928 aa23.4■■□□□ 1.34
C9orf3-222ENST00000496567 UBXN1Q04323 297 aa23.4■■□□□ 1.34
C9orf3-222ENST00000496567 EXOC3L4Q17RC7 722 aa23.4■■□□□ 1.34
C9orf3-222ENST00000496567 PPP2R2DQ66LE6 453 aa23.4■■□□□ 1.34
C9orf3-222ENST00000496567 SCARA3Q6AZY7 606 aa23.4■■□□□ 1.34
C9orf3-222ENST00000496567 EHBP1Q8NDI1 1231 aa23.4■■□□□ 1.34
C9orf3-222ENST00000496567 HASPINQ8TF76 798 aa23.4■■□□□ 1.34
C9orf3-222ENST00000496567 SEMA4DQ92854 862 aa23.4■■□□□ 1.34
C9orf3-222ENST00000496567 TIFAQ96CG3 184 aa23.4■■□□□ 1.34
C9orf3-222ENST00000496567 XYLT2Q9H1B5 865 aa23.4■■□□□ 1.34
C9orf3-222ENST00000496567 RTN4Q9NQC3 1192 aaKnown RBP23.4■■□□□ 1.34
C9orf3-222ENST00000496567 MARCH5Q9NX47 278 aa23.4■■□□□ 1.34
C9orf3-222ENST00000496567 GCNT4Q9P109 453 aa23.4■■□□□ 1.34
C9orf3-222ENST00000496567 STK39Q9UEW8 545 aa23.4■■□□□ 1.34
C9orf3-222ENST00000496567 KPNA7A9QM74 516 aa23.39■■□□□ 1.33
C9orf3-222ENST00000496567 ARHGEF15O94989 841 aa23.39■■□□□ 1.33
C9orf3-222ENST00000496567 TPM3P06753 285 aa23.39■■□□□ 1.33
C9orf3-222ENST00000496567 ERVK-21P61565 698 aa23.39■■□□□ 1.33
C9orf3-222ENST00000496567 KRT17Q04695 432 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms