RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 TYW1Q9NV66 732 aaKnown RBP9.61□□□□□ -0.87
HPS4-217ENST00000496385 NDE1Q9NXR1 346 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 SAP30BPQ9UHR5 308 aaKnown RBP9.61□□□□□ -0.87
HPS4-217ENST00000496385 NR2E1Q9Y466 385 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 HTR3EA5X5Y0 456 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 POTECB2RU33 542 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 HGSO14964 777 aaPredicted RBP9.61□□□□□ -0.87
HPS4-217ENST00000496385 EXOC3O60645 756 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 OPHN1O60890 802 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 CREB1P16220 341 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 ITIH2P19823 946 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 PRDX5P30044 214 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 HADHBP55084 474 aaKnown RBP9.61□□□□□ -0.87
HPS4-217ENST00000496385 CERKLQ49MI3 558 aaPredicted RBP9.61□□□□□ -0.87
HPS4-217ENST00000496385 TBC1D10BQ4KMP7 808 aaPredicted RBP9.61□□□□□ -0.87
HPS4-217ENST00000496385 EAPPQ56P03 285 aaPredicted RBP9.61□□□□□ -0.87
HPS4-217ENST00000496385 TMCO4Q5TGY1 634 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 RSBN1LQ6PCB5 846 aaPredicted RBP9.61□□□□□ -0.87
HPS4-217ENST00000496385 OTUD6AQ7L8S5 288 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 MICALL2Q8IY33 904 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 DAGLBQ8NCG7 672 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 DENND1AQ8TEH3 1009 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 TEKT1Q969V4 418 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 DYDC2Q96IM9 177 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 ZFRQ96KR1 1074 aaKnown RBP9.61□□□□□ -0.87
HPS4-217ENST00000496385 ZSCAN10Q96SZ4 725 aaPredicted RBP9.61□□□□□ -0.87
HPS4-217ENST00000496385 GOLPH3Q9H4A6 298 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 C17orf75Q9HAS0 396 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 PIH1D3Q9NQM4 214 aaKnown RBP9.61□□□□□ -0.87
HPS4-217ENST00000496385 METTL5Q9NRN9 209 aaKnown RBP9.61□□□□□ -0.87
HPS4-217ENST00000496385 PPP1R9AQ9ULJ8 1098 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 PCDHA4Q9UN74 947 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 ARAP2Q8WZ64 1704 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 TRIM43BA6NCK2 446 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 MATN2O00339 956 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 HAUS5O94927 633 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 KRT13P13646 458 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 GTF2H1P32780 548 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 NEK3P51956 506 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 WDR4P57081 412 aaKnown RBP9.6□□□□□ -0.87
HPS4-217ENST00000496385 CDC16Q13042 620 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 IFIT1BQ5T764 474 aaKnown RBP9.6□□□□□ -0.87
HPS4-217ENST00000496385 Q6ZNX1 250 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 FAM47EQ6ZV65 393 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 SYDE1Q6ZW31 735 aaPredicted RBP9.6□□□□□ -0.87
HPS4-217ENST00000496385 RELL1Q8IUW5 271 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 UHMK1Q8TAS1 419 aaKnown RBP9.6□□□□□ -0.87
HPS4-217ENST00000496385 KCNN1Q92952 543 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 VPS50Q96JG6 964 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 ZNHIT2Q9UHR6 403 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 MTUS1Q9ULD2 1270 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 DMTF1Q9Y222 760 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 FADS3Q9Y5Q0 445 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 ASTN2O75129 1339 aaPredicted RBP9.6□□□□□ -0.87
HPS4-217ENST00000496385 CCDC194A0A1B0GVG4 234 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 RNASEH1O60930 286 aaKnown RBP9.6□□□□□ -0.87
HPS4-217ENST00000496385 CSDE1O75534 798 aaKnown RBP9.6□□□□□ -0.87
HPS4-217ENST00000496385 PLEKHA8P1O95397 391 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 UQCRBP14927 111 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 GEMIN4P57678 1058 aaKnown RBP9.6□□□□□ -0.87
HPS4-217ENST00000496385 IRX4P78413 519 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 BCL2A1Q16548 175 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 STRIP1Q5VSL9 837 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 DCAF12L1Q5VU92 463 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 MYOCDQ8IZQ8 938 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 UBL4BQ8N7F7 174 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 C12orf50Q8NA57 414 aaPredicted RBP9.6□□□□□ -0.87
HPS4-217ENST00000496385 MORC4Q8TE76 937 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 PRICKLE1Q96MT3 831 aaPredicted RBP9.6□□□□□ -0.87
HPS4-217ENST00000496385 PPCSQ9HAB8 311 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 ERVK-5Q9HDB9 667 aa9.6□□□□□ -0.87
HPS4-217ENST00000496385 PP2D1A8MPX8 630 aa9.59□□□□□ -0.87
HPS4-217ENST00000496385 ARID5AQ03989 594 aa9.59□□□□□ -0.87
HPS4-217ENST00000496385 TCEAL1Q15170 157 aa9.59□□□□□ -0.87
HPS4-217ENST00000496385 CCDC137Q6PK04 289 aaKnown RBP9.59□□□□□ -0.87
HPS4-217ENST00000496385 DLK2Q6UY11 383 aa9.59□□□□□ -0.87
HPS4-217ENST00000496385 PDSS2Q86YH6 399 aa9.59□□□□□ -0.87
HPS4-217ENST00000496385 ZC3H3Q8IXZ2 948 aaKnown RBP9.59□□□□□ -0.87
HPS4-217ENST00000496385 PRELID2Q8N945 189 aa9.59□□□□□ -0.87
HPS4-217ENST00000496385 TRPM4Q8TD43 1214 aa9.59□□□□□ -0.87
HPS4-217ENST00000496385 DTX3LQ8TDB6 740 aa9.59□□□□□ -0.87
HPS4-217ENST00000496385 LRRC15Q8TF66 581 aa9.59□□□□□ -0.87
HPS4-217ENST00000496385 NMD3Q96D46 503 aaKnown RBP9.59□□□□□ -0.87
HPS4-217ENST00000496385 BTBD9Q96Q07 612 aa9.59□□□□□ -0.87
HPS4-217ENST00000496385 MLXIPLQ9NP71 852 aa9.59□□□□□ -0.87
HPS4-217ENST00000496385 EURLQ9NYK6 297 aa9.59□□□□□ -0.87
HPS4-217ENST00000496385 CLIC5Q9NZA1 410 aa9.59□□□□□ -0.87
HPS4-217ENST00000496385 GPRC5DQ9NZD1 345 aa9.59□□□□□ -0.87
HPS4-217ENST00000496385 NAALADL1Q9UQQ1 740 aa9.59□□□□□ -0.87
HPS4-217ENST00000496385 TELO2Q9Y4R8 837 aa9.59□□□□□ -0.87
HPS4-217ENST00000496385 CTDP1Q9Y5B0 961 aaPredicted RBP9.59□□□□□ -0.87
HPS4-217ENST00000496385 ADAMTSL1Q8N6G6 1762 aa9.59□□□□□ -0.87
HPS4-217ENST00000496385 hCG_2014768A0A024R1R8 64 aa9.59□□□□□ -0.87
HPS4-217ENST00000496385 M0R2N6 131 aa9.59□□□□□ -0.87
HPS4-217ENST00000496385 VILLO15195 856 aa9.59□□□□□ -0.87
HPS4-217ENST00000496385 CIB2O75838 187 aa9.59□□□□□ -0.87
HPS4-217ENST00000496385 PAX3P23760 479 aa9.59□□□□□ -0.87
HPS4-217ENST00000496385 CHN2P52757 468 aa9.59□□□□□ -0.87
HPS4-217ENST00000496385 ADCY1Q08828 1119 aa9.59□□□□□ -0.87
HPS4-217ENST00000496385 DNAJC3Q13217 504 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms