RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 ARID3AQ99856 593 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 BCO2Q9BYV7 579 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 TSGA10Q9BZW7 698 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 PLAGL2Q9UPG8 496 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 FGFR1P11362 822 aa9.17□□□□□ -0.94
VPS13B-206ENST00000496144 HOXD8P13378 290 aaPredicted RBP9.17□□□□□ -0.94
VPS13B-206ENST00000496144 KRT13P13646 458 aa9.17□□□□□ -0.94
VPS13B-206ENST00000496144 NAMPTP43490 491 aa9.17□□□□□ -0.94
VPS13B-206ENST00000496144 GET4Q7L5D6 327 aaPredicted RBP9.17□□□□□ -0.94
VPS13B-206ENST00000496144 DDX53Q86TM3 631 aaKnown RBP9.17□□□□□ -0.94
VPS13B-206ENST00000496144 GLYCTKQ8IVS8 523 aa9.17□□□□□ -0.94
VPS13B-206ENST00000496144 SCFD1Q8WVM8 642 aa9.17□□□□□ -0.94
VPS13B-206ENST00000496144 ERVK-5Q9HDB9 667 aa9.17□□□□□ -0.94
VPS13B-206ENST00000496144 DSEQ9UL01 958 aa9.17□□□□□ -0.94
VPS13B-206ENST00000496144 HNRNPDLO14979 420 aaKnown RBP9.17□□□□□ -0.94
VPS13B-206ENST00000496144 CHRNA1P02708 482 aa9.17□□□□□ -0.94
VPS13B-206ENST00000496144 ITGB8P26012 769 aa9.17□□□□□ -0.94
VPS13B-206ENST00000496144 CYLC1P35663 651 aaPredicted RBP9.17□□□□□ -0.94
VPS13B-206ENST00000496144 MYL7Q01449 175 aa9.17□□□□□ -0.94
VPS13B-206ENST00000496144 SP2Q02086 613 aa9.17□□□□□ -0.94
VPS13B-206ENST00000496144 PDZD4Q76G19 769 aaPredicted RBP9.17□□□□□ -0.94
VPS13B-206ENST00000496144 CEP68Q76N32 757 aa9.17□□□□□ -0.94
VPS13B-206ENST00000496144 CD302Q8IX05 232 aa9.17□□□□□ -0.94
VPS13B-206ENST00000496144 KIAA0319LQ8IZA0 1049 aa9.17□□□□□ -0.94
VPS13B-206ENST00000496144 GPR161Q8N6U8 529 aaKnown RBP9.17□□□□□ -0.94
VPS13B-206ENST00000496144 FBXL18Q96ME1 805 aa9.17□□□□□ -0.94
VPS13B-206ENST00000496144 CLDN3O15551 220 aa9.17□□□□□ -0.94
VPS13B-206ENST00000496144 LDHAP00338 332 aaKnown RBP9.17□□□□□ -0.94
VPS13B-206ENST00000496144 PREPLQ4J6C6 727 aaPredicted RBP9.17□□□□□ -0.94
VPS13B-206ENST00000496144 NIFKQ9BYG3 293 aaKnown RBP9.17□□□□□ -0.94
VPS13B-206ENST00000496144 ZNHIT6Q9NWK9 470 aaKnown RBP9.17□□□□□ -0.94
VPS13B-206ENST00000496144 KRT19P08727 400 aa9.17□□□□□ -0.94
VPS13B-206ENST00000496144 CLCN6P51797 869 aa9.17□□□□□ -0.94
VPS13B-206ENST00000496144 CACNB1Q02641 598 aaPredicted RBP9.17□□□□□ -0.94
VPS13B-206ENST00000496144 ARID5AQ03989 594 aa9.17□□□□□ -0.94
VPS13B-206ENST00000496144 JAKMIP2Q96AA8 810 aa9.17□□□□□ -0.94
VPS13B-206ENST00000496144 REEP2Q9BRK0 252 aa9.17□□□□□ -0.94
VPS13B-206ENST00000496144 TBC1D7Q9P0N9 293 aa9.17□□□□□ -0.94
VPS13B-206ENST00000496144 CDC23Q9UJX2 597 aa9.17□□□□□ -0.94
VPS13B-206ENST00000496144 MRPS23Q9Y3D9 190 aaKnown RBP9.17□□□□□ -0.94
VPS13B-206ENST00000496144 PSMD10O75832 226 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 TMEM191BP0C7N4 346 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 WHAMMP3Q1A5X7 153 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 GLIPR1L2Q4G1C9 344 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 FAM171A1Q5VUB5 890 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 ANKRD54Q6NXT1 300 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 UBXN4Q92575 508 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 C17orf75Q9HAS0 396 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 TRIM10Q9UDY6 481 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 C22orf31O95567 290 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 ODC1P11926 461 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 KCNMA1Q12791 1236 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 BMT2Q1RMZ1 405 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 FAM228AQ86W67 206 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 TSPAN18Q96SJ8 248 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 PLEKHA4Q9H4M7 779 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 HAUS4Q9H6D7 363 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 ZFP37Q9Y6Q3 630 aaPredicted RBP9.16□□□□□ -0.94
VPS13B-206ENST00000496144 EYA4O95677 639 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 DESP17661 470 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 LRRC32Q14392 662 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 FAM178BQ8IXR5 827 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 E2F7Q96AV8 911 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 KCND2Q9NZV8 630 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 IGSF9Q9P2J2 1179 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 GRIN2DO15399 1336 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 EPHB6O15197 1021 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 CALUO43852 315 aaPredicted RBP9.16□□□□□ -0.94
VPS13B-206ENST00000496144 PSMD5Q16401 504 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 EHBP1Q8NDI1 1231 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 BAP1Q92560 729 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 EEF2KMTQ96G04 330 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 ACCSQ96QU6 501 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 MED10Q9BTT4 135 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 MSTO1Q9BUK6 570 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 RUSC1Q9BVN2 902 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 PRO3102Q9H379 93 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 SNX25Q9H3E2 840 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 CEP72Q9P209 647 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 ZSWIM8A7E2V4 1837 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 PDE4DIPQ5VU43 2346 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 FSHRP23945 695 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 PEX3P56589 373 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 HTRA4P83105 476 aaPredicted RBP9.16□□□□□ -0.94
VPS13B-206ENST00000496144 CETN1Q12798 172 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 MAPK8IP2Q13387 824 aaPredicted RBP9.16□□□□□ -0.94
VPS13B-206ENST00000496144 EDRF1Q3B7T1 1238 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 CTXN3Q4LDR2 81 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 PIGOQ8TEQ8 1089 aa9.16□□□□□ -0.94
VPS13B-206ENST00000496144 ARGLU1Q9NWB6 273 aaPredicted RBP9.16□□□□□ -0.94
VPS13B-206ENST00000496144 A0A0U1RQF3 1178 aa9.15□□□□□ -0.94
VPS13B-206ENST00000496144 DGKIO75912 1065 aa9.15□□□□□ -0.94
VPS13B-206ENST00000496144 FGFR4P22455 802 aa9.15□□□□□ -0.94
VPS13B-206ENST00000496144 CBX1P83916 185 aa9.15□□□□□ -0.94
VPS13B-206ENST00000496144 FKBP3Q00688 224 aaKnown RBP9.15□□□□□ -0.94
VPS13B-206ENST00000496144 TRAPPC11Q7Z392 1133 aa9.15□□□□□ -0.94
VPS13B-206ENST00000496144 TMCO2Q7Z6W1 182 aaPredicted RBP9.15□□□□□ -0.94
VPS13B-206ENST00000496144 PALB2Q86YC2 1186 aa9.15□□□□□ -0.94
VPS13B-206ENST00000496144 RABGGTAQ92696 567 aa9.15□□□□□ -0.94
VPS13B-206ENST00000496144 UBE4BO95155 1302 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms