RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 TMEM270Q6UE05 265 aa17.56■□□□□ 0.4
HLA-A-208ENST00000496081 SERINC5Q86VE9 423 aa17.56■□□□□ 0.4
HLA-A-208ENST00000496081 CD302Q8IX05 232 aa17.56■□□□□ 0.4
HLA-A-208ENST00000496081 PCSK9Q8NBP7 692 aaKnown RBP17.56■□□□□ 0.4
HLA-A-208ENST00000496081 ZNF296Q8WUU4 475 aaPredicted RBP17.56■□□□□ 0.4
HLA-A-208ENST00000496081 SNTG2Q9NY99 539 aa17.56■□□□□ 0.4
HLA-A-208ENST00000496081 C2CD2Q9Y426 696 aa17.56■□□□□ 0.4
HLA-A-208ENST00000496081 RTN2O75298 545 aa17.55■□□□□ 0.4
HLA-A-208ENST00000496081 TFRCP02786 760 aaKnown RBP17.55■□□□□ 0.4
HLA-A-208ENST00000496081 FTLP02792 175 aaPredicted RBP17.55■□□□□ 0.4
HLA-A-208ENST00000496081 ITGB3P05106 788 aa17.55■□□□□ 0.4
HLA-A-208ENST00000496081 NAA30Q147X3 362 aaPredicted RBP17.55■□□□□ 0.4
HLA-A-208ENST00000496081 RBBP8NLQ8NC74 664 aaPredicted RBP17.55■□□□□ 0.4
HLA-A-208ENST00000496081 MNS1Q8NEH6 495 aa17.55■□□□□ 0.4
HLA-A-208ENST00000496081 CTNNBL1Q8WYA6 563 aaPredicted RBP17.55■□□□□ 0.4
HLA-A-208ENST00000496081 TAF4BQ92750 862 aa17.55■□□□□ 0.4
HLA-A-208ENST00000496081 THAP2Q9H0W7 228 aa17.55■□□□□ 0.4
HLA-A-208ENST00000496081 CXCL16Q9H2A7 254 aa17.55■□□□□ 0.4
HLA-A-208ENST00000496081 PLEKHA5Q9HAU0 1116 aa17.55■□□□□ 0.4
HLA-A-208ENST00000496081 NOC2LQ9Y3T9 749 aaKnown RBP17.55■□□□□ 0.4
HLA-A-208ENST00000496081 HES2Q9Y543 173 aa17.55■□□□□ 0.4
HLA-A-208ENST00000496081 CDY2AQ9Y6F7 541 aa17.55■□□□□ 0.4
HLA-A-208ENST00000496081 TRIP11Q15643 1979 aa17.55■□□□□ 0.4
HLA-A-208ENST00000496081 NCANO14594 1321 aa17.54■□□□□ 0.4
HLA-A-208ENST00000496081 GRID2IPA4D2P6 1211 aa17.54■□□□□ 0.4
HLA-A-208ENST00000496081 HSPA1AP0DMV8 641 aaKnown RBP17.54■□□□□ 0.4
HLA-A-208ENST00000496081 HSPA1BP0DMV9 641 aaKnown RBP17.54■□□□□ 0.4
HLA-A-208ENST00000496081 ASPAP45381 313 aa17.54■□□□□ 0.4
HLA-A-208ENST00000496081 NOP2P46087 812 aaKnown RBP17.54■□□□□ 0.4
HLA-A-208ENST00000496081 UBXN11Q5T124 520 aa17.54■□□□□ 0.4
HLA-A-208ENST00000496081 RNF180Q86T96 592 aa17.54■□□□□ 0.4
HLA-A-208ENST00000496081 RSPH3Q86UC2 560 aa17.54■□□□□ 0.4
HLA-A-208ENST00000496081 FAM228AQ86W67 206 aa17.54■□□□□ 0.4
HLA-A-208ENST00000496081 ZNF677Q86XU0 584 aa17.54■□□□□ 0.4
HLA-A-208ENST00000496081 NT5DC4Q86YG4 428 aa17.54■□□□□ 0.4
HLA-A-208ENST00000496081 TRIM6Q9C030 488 aaPredicted RBP17.54■□□□□ 0.4
HLA-A-208ENST00000496081 NXF3Q9H4D5 531 aaKnown RBP17.54■□□□□ 0.4
HLA-A-208ENST00000496081 TRPV2Q9Y5S1 764 aa17.54■□□□□ 0.4
HLA-A-208ENST00000496081 RALGAPA2Q2PPJ7 1873 aa17.54■□□□□ 0.4
HLA-A-208ENST00000496081 M0QZ92 97 aa17.53■□□□□ 0.4
HLA-A-208ENST00000496081 SRGAP2O75044 1071 aa17.53■□□□□ 0.4
HLA-A-208ENST00000496081 INHAP05111 366 aa17.53■□□□□ 0.4
HLA-A-208ENST00000496081 ZNF132P52740 706 aa17.53■□□□□ 0.4
HLA-A-208ENST00000496081 IFI16Q16666 785 aaKnown RBP17.53■□□□□ 0.4
HLA-A-208ENST00000496081 TPCN2Q8NHX9 752 aa17.53■□□□□ 0.4
HLA-A-208ENST00000496081 RFFLQ8WZ73 363 aa17.53■□□□□ 0.4
HLA-A-208ENST00000496081 ARHGEF26Q96DR7 871 aa17.53■□□□□ 0.4
HLA-A-208ENST00000496081 KIF12Q96FN5 646 aa17.53■□□□□ 0.4
HLA-A-208ENST00000496081 SNX27Q96L92 541 aa17.53■□□□□ 0.4
HLA-A-208ENST00000496081 TLR10Q9BXR5 811 aa17.53■□□□□ 0.4
HLA-A-208ENST00000496081 CISHQ9NSE2 258 aa17.53■□□□□ 0.4
HLA-A-208ENST00000496081 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.53■□□□□ 0.41e-7■□□□□ 8.3
HLA-A-208ENST00000496081 SNX12Q9UMY4 172 aa17.53■□□□□ 0.4
HLA-A-208ENST00000496081 V9GYY5 206 aaPredicted RBP17.53■□□□□ 0.4
HLA-A-208ENST00000496081 NCK2O43639 380 aa17.53■□□□□ 0.4
HLA-A-208ENST00000496081 WEE2P0C1S8 567 aa17.53■□□□□ 0.4
HLA-A-208ENST00000496081 CD58P19256 250 aa17.53■□□□□ 0.4
HLA-A-208ENST00000496081 GUCY2FP51841 1108 aa17.53■□□□□ 0.4
HLA-A-208ENST00000496081 YARSP54577 528 aaKnown RBP17.53■□□□□ 0.4
HLA-A-208ENST00000496081 WHAMMP3Q1A5X7 153 aa17.53■□□□□ 0.4
HLA-A-208ENST00000496081 RPAINQ86UA6 219 aa17.53■□□□□ 0.4
HLA-A-208ENST00000496081 SLC35G2Q8TBE7 412 aa17.53■□□□□ 0.4
HLA-A-208ENST00000496081 ZMAT2Q96NC0 199 aaKnown RBP17.53■□□□□ 0.4
HLA-A-208ENST00000496081 OSGEPQ9NPF4 335 aa17.53■□□□□ 0.4
HLA-A-208ENST00000496081 DPP3Q9NY33 737 aa17.53■□□□□ 0.4
HLA-A-208ENST00000496081 NXF1Q9UBU9 619 aaKnown RBP17.53■□□□□ 0.4
HLA-A-208ENST00000496081 ITGA11Q9UKX5 1188 aa17.53■□□□□ 0.4
HLA-A-208ENST00000496081 POLIQ9UNA4 740 aa17.53■□□□□ 0.4
HLA-A-208ENST00000496081 DNAH12Q6ZR08 3092 aa17.52■□□□□ 0.4
HLA-A-208ENST00000496081 TADA3O75528 432 aa17.52■□□□□ 0.4
HLA-A-208ENST00000496081 FTCDO95954 541 aa17.52■□□□□ 0.4
HLA-A-208ENST00000496081 CHRNA1P02708 482 aa17.52■□□□□ 0.4
HLA-A-208ENST00000496081 PRLRP16471 622 aa17.52■□□□□ 0.4
HLA-A-208ENST00000496081 GNA15P30679 374 aa17.52■□□□□ 0.4
HLA-A-208ENST00000496081 POLR2BP30876 1174 aaKnown RBP17.52■□□□□ 0.4
HLA-A-208ENST00000496081 ATICP31939 592 aa17.52■□□□□ 0.4
HLA-A-208ENST00000496081 ACLYP53396 1101 aa17.52■□□□□ 0.4
HLA-A-208ENST00000496081 ARHGEF6Q15052 776 aa17.52■□□□□ 0.4
HLA-A-208ENST00000496081 PTGISQ16647 500 aa17.52■□□□□ 0.4
HLA-A-208ENST00000496081 CLEC16AQ2KHT3 1053 aa17.52■□□□□ 0.4
HLA-A-208ENST00000496081 WDR72Q3MJ13 1102 aa17.52■□□□□ 0.4
HLA-A-208ENST00000496081 ZNF667Q5HYK9 610 aa17.52■□□□□ 0.4
HLA-A-208ENST00000496081 ALKAL1Q6UXT8 129 aa17.52■□□□□ 0.4
HLA-A-208ENST00000496081 SCARA5Q6ZMJ2 495 aa17.52■□□□□ 0.4
HLA-A-208ENST00000496081 LRRC57Q8N9N7 239 aa17.52■□□□□ 0.4
HLA-A-208ENST00000496081 SLAIN1Q8ND83 568 aa17.52■□□□□ 0.4
HLA-A-208ENST00000496081 FAXDC2Q96IV6 333 aa17.52■□□□□ 0.4
HLA-A-208ENST00000496081 SENP6Q9GZR1 1112 aaPredicted RBP17.52■□□□□ 0.4
HLA-A-208ENST00000496081 VRTNQ9H8Y1 702 aa17.52■□□□□ 0.4
HLA-A-208ENST00000496081 AGAP1Q9UPQ3 857 aa17.52■□□□□ 0.4
HLA-A-208ENST00000496081 DERAQ9Y315 318 aa17.52■□□□□ 0.4
HLA-A-208ENST00000496081 EFCAB8A8MWE9 144 aa17.51■□□□□ 0.39
HLA-A-208ENST00000496081 CABYRO75952 493 aa17.51■□□□□ 0.39
HLA-A-208ENST00000496081 RECQL4O94761 1208 aa17.51■□□□□ 0.39
HLA-A-208ENST00000496081 CTSHP09668 335 aa17.51■□□□□ 0.39
HLA-A-208ENST00000496081 UNGP13051 313 aaPredicted RBP17.51■□□□□ 0.39
HLA-A-208ENST00000496081 AKAP5P24588 427 aa17.51■□□□□ 0.39
HLA-A-208ENST00000496081 GPC5P78333 572 aa17.51■□□□□ 0.39
HLA-A-208ENST00000496081 MGAT3Q09327 533 aa17.51■□□□□ 0.39
HLA-A-208ENST00000496081 ITGA7Q13683 1181 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms