RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 VRTNQ9H8Y1 702 aa26.18■■□□□ 1.78
PPP1R3F-205ENST00000495799 AGO3Q9H9G7 860 aaKnown RBP26.18■■□□□ 1.78
PPP1R3F-205ENST00000495799 KIF5CO60282 957 aa26.17■■□□□ 1.78
PPP1R3F-205ENST00000495799 KCNE1P15382 129 aa26.17■■□□□ 1.78
PPP1R3F-205ENST00000495799 TNFAIP3P21580 790 aa26.17■■□□□ 1.78
PPP1R3F-205ENST00000495799 FAM126BQ8IXS8 530 aa26.17■■□□□ 1.78
PPP1R3F-205ENST00000495799 ZNF333Q96JL9 665 aa26.17■■□□□ 1.78
PPP1R3F-205ENST00000495799 AGPAT1Q99943 283 aa26.17■■□□□ 1.78
PPP1R3F-205ENST00000495799 SIX4Q9UIU6 781 aa26.17■■□□□ 1.78
PPP1R3F-205ENST00000495799 HTTP42858 3142 aa26.17■■□□□ 1.78
PPP1R3F-205ENST00000495799 A0A087X0T9 212 aa26.16■■□□□ 1.78
PPP1R3F-205ENST00000495799 ZNF263O14978 683 aa26.16■■□□□ 1.78
PPP1R3F-205ENST00000495799 CYP26A1O43174 497 aa26.16■■□□□ 1.78
PPP1R3F-205ENST00000495799 FAM228BP0C875 321 aa26.16■■□□□ 1.78
PPP1R3F-205ENST00000495799 ITGA4P13612 1032 aa26.16■■□□□ 1.78
PPP1R3F-205ENST00000495799 AKAP5P24588 427 aa26.16■■□□□ 1.78
PPP1R3F-205ENST00000495799 CTCFP49711 727 aaPredicted RBP26.16■■□□□ 1.78
PPP1R3F-205ENST00000495799 CCDC122Q5T0U0 273 aa26.16■■□□□ 1.78
PPP1R3F-205ENST00000495799 ARMC5Q96C12 935 aa26.16■■□□□ 1.78
PPP1R3F-205ENST00000495799 XYLT2Q9H1B5 865 aa26.16■■□□□ 1.78
PPP1R3F-205ENST00000495799 MYO1AQ9UBC5 1043 aa26.16■■□□□ 1.78
PPP1R3F-205ENST00000495799 SGPL1O95470 568 aa26.15■■□□□ 1.78
PPP1R3F-205ENST00000495799 CD4P01730 458 aa26.15■■□□□ 1.78
PPP1R3F-205ENST00000495799 TFRCP02786 760 aaKnown RBP26.15■■□□□ 1.78
PPP1R3F-205ENST00000495799 POLR2BP30876 1174 aaKnown RBP26.15■■□□□ 1.78
PPP1R3F-205ENST00000495799 ETF1P62495 437 aaKnown RBP26.15■■□□□ 1.78
PPP1R3F-205ENST00000495799 MYO1EQ12965 1108 aa26.15■■□□□ 1.78
PPP1R3F-205ENST00000495799 ZBTB6Q15916 424 aa26.15■■□□□ 1.78
PPP1R3F-205ENST00000495799 FAM124BQ9H5Z6 455 aaPredicted RBP26.15■■□□□ 1.78
PPP1R3F-205ENST00000495799 AGAP1Q9UPQ3 857 aa26.15■■□□□ 1.78
PPP1R3F-205ENST00000495799 PCDHB4Q9Y5E5 795 aa26.15■■□□□ 1.78
PPP1R3F-205ENST00000495799 SELPP16109 830 aa26.14■■□□□ 1.78
PPP1R3F-205ENST00000495799 CYP3A5P20815 502 aa26.14■■□□□ 1.78
PPP1R3F-205ENST00000495799 DSC3Q14574 896 aa26.14■■□□□ 1.78
PPP1R3F-205ENST00000495799 NAB2Q15742 525 aa26.14■■□□□ 1.78
PPP1R3F-205ENST00000495799 ALKBH5Q6P6C2 394 aaKnown RBP26.14■■□□□ 1.78
PPP1R3F-205ENST00000495799 ZNF677Q86XU0 584 aa26.14■■□□□ 1.78
PPP1R3F-205ENST00000495799 U2AF1L4Q8WU68 220 aaKnown RBP26.14■■□□□ 1.78
PPP1R3F-205ENST00000495799 SYT11Q9BT88 431 aa26.14■■□□□ 1.78
PPP1R3F-205ENST00000495799 NAGPAQ9UK23 515 aa26.14■■□□□ 1.78
PPP1R3F-205ENST00000495799 PJA2O43164 708 aa26.14■■□□□ 1.77
PPP1R3F-205ENST00000495799 ZNF623O75123 536 aa26.14■■□□□ 1.77
PPP1R3F-205ENST00000495799 ATF7P17544 494 aaPredicted RBP26.14■■□□□ 1.77
PPP1R3F-205ENST00000495799 CAPN2P17655 700 aa26.14■■□□□ 1.77
PPP1R3F-205ENST00000495799 ARHGAP25P42331 645 aa26.14■■□□□ 1.77
PPP1R3F-205ENST00000495799 LRRC8DQ7L1W4 858 aa26.14■■□□□ 1.77
PPP1R3F-205ENST00000495799 TTC39CQ8N584 583 aa26.14■■□□□ 1.77
PPP1R3F-205ENST00000495799 LRRC52Q8N7C0 313 aa26.14■■□□□ 1.77
PPP1R3F-205ENST00000495799 EPS8L1Q8TE68 723 aa26.14■■□□□ 1.77
PPP1R3F-205ENST00000495799 ELMO3Q96BJ8 720 aa26.14■■□□□ 1.77
PPP1R3F-205ENST00000495799 PGBD4Q96DM1 585 aa26.14■■□□□ 1.77
PPP1R3F-205ENST00000495799 HPDLQ96IR7 371 aa26.14■■□□□ 1.77
PPP1R3F-205ENST00000495799 ARID3AQ99856 593 aa26.14■■□□□ 1.77
PPP1R3F-205ENST00000495799 CNTN6Q9UQ52 1028 aa26.14■■□□□ 1.77
PPP1R3F-205ENST00000495799 GIT1Q9Y2X7 761 aa26.14■■□□□ 1.77
PPP1R3F-205ENST00000495799 UMODL1Q5DID0 1318 aa26.13■■□□□ 1.77
PPP1R3F-205ENST00000495799 SMIM28A0A1B0GU29 152 aa26.13■■□□□ 1.77
PPP1R3F-205ENST00000495799 DDX3XO00571 662 aaKnown RBP eCLIP26.13■■□□□ 1.77
PPP1R3F-205ENST00000495799 CYP11B1P15538 503 aa26.13■■□□□ 1.77
PPP1R3F-205ENST00000495799 ACO1P21399 889 aaKnown RBP26.13■■□□□ 1.77
PPP1R3F-205ENST00000495799 TRAF7Q6Q0C0 670 aa26.13■■□□□ 1.77
PPP1R3F-205ENST00000495799 MRPL10Q7Z7H8 261 aaKnown RBP26.13■■□□□ 1.77
PPP1R3F-205ENST00000495799 ANKLE1Q8NAG6 615 aa26.13■■□□□ 1.77
PPP1R3F-205ENST00000495799 SLC30A5Q8TAD4 765 aa26.13■■□□□ 1.77
PPP1R3F-205ENST00000495799 CXorf38Q8TB03 319 aa26.13■■□□□ 1.77
PPP1R3F-205ENST00000495799 ZMAT2Q96NC0 199 aaKnown RBP26.13■■□□□ 1.77
PPP1R3F-205ENST00000495799 RPS6KC1Q96S38 1066 aa26.13■■□□□ 1.77
PPP1R3F-205ENST00000495799 CYP3A43Q9HB55 503 aa26.13■■□□□ 1.77
PPP1R3F-205ENST00000495799 UBN1Q9NPG3 1134 aa26.13■■□□□ 1.77
PPP1R3F-205ENST00000495799 SEPT11Q9NVA2 429 aaKnown RBP26.13■■□□□ 1.77
PPP1R3F-205ENST00000495799 SLC38A7Q9NVC3 462 aa26.13■■□□□ 1.77
PPP1R3F-205ENST00000495799 INTUQ9ULD6 942 aa26.13■■□□□ 1.77
PPP1R3F-205ENST00000495799 TRIP11Q15643 1979 aa26.12■■□□□ 1.77
PPP1R3F-205ENST00000495799 PITPNM1O00562 1244 aa26.12■■□□□ 1.77
PPP1R3F-205ENST00000495799 GNG11P61952 73 aa26.12■■□□□ 1.77
PPP1R3F-205ENST00000495799 TNNC1P63316 161 aa26.12■■□□□ 1.77
PPP1R3F-205ENST00000495799 SLC47A2Q86VL8 602 aa26.12■■□□□ 1.77
PPP1R3F-205ENST00000495799 GLYCTKQ8IVS8 523 aa26.12■■□□□ 1.77
PPP1R3F-205ENST00000495799 UBR7Q8N806 425 aa26.12■■□□□ 1.77
PPP1R3F-205ENST00000495799 KIF18AQ8NI77 898 aa26.12■■□□□ 1.77
PPP1R3F-205ENST00000495799 LNX1Q8TBB1 728 aaPredicted RBP26.12■■□□□ 1.77
PPP1R3F-205ENST00000495799 ZNF560Q96MR9 790 aa26.12■■□□□ 1.77
PPP1R3F-205ENST00000495799 RNF39Q9H2S5 420 aa26.12■■□□□ 1.77
PPP1R3F-205ENST00000495799 KLK14Q9P0G3 267 aa26.12■■□□□ 1.77
PPP1R3F-205ENST00000495799 NXF1Q9UBU9 619 aaKnown RBP26.12■■□□□ 1.77
PPP1R3F-205ENST00000495799 NOCTQ9UK39 431 aaKnown RBP26.12■■□□□ 1.77
PPP1R3F-205ENST00000495799 PCNTO95613 3336 aa26.11■■□□□ 1.77
PPP1R3F-205ENST00000495799 PNPLA4P41247 253 aa26.11■■□□□ 1.77
PPP1R3F-205ENST00000495799 ASPAP45381 313 aa26.11■■□□□ 1.77
PPP1R3F-205ENST00000495799 LBX1P52954 281 aa26.11■■□□□ 1.77
PPP1R3F-205ENST00000495799 CDR2Q01850 454 aa26.11■■□□□ 1.77
PPP1R3F-205ENST00000495799 WDR72Q3MJ13 1102 aa26.11■■□□□ 1.77
PPP1R3F-205ENST00000495799 TMEM270Q6UE05 265 aa26.11■■□□□ 1.77
PPP1R3F-205ENST00000495799 RPUSD2Q8IZ73 545 aaKnown RBP26.11■■□□□ 1.77
PPP1R3F-205ENST00000495799 RBBP8NLQ8NC74 664 aaPredicted RBP26.11■■□□□ 1.77
PPP1R3F-205ENST00000495799 ADAM2Q99965 735 aa26.11■■□□□ 1.77
PPP1R3F-205ENST00000495799 FTHL17Q9BXU8 183 aa26.11■■□□□ 1.77
PPP1R3F-205ENST00000495799 BCO2Q9BYV7 579 aa26.11■■□□□ 1.77
PPP1R3F-205ENST00000495799 NENFQ9UMX5 172 aa26.11■■□□□ 1.77
PPP1R3F-205ENST00000495799 GUCA1BQ9UMX6 200 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms