RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 CRACR2AQ9BSW2 395 aa20.99■□□□□ 0.95
ATG3-208ENST00000495756 GRPEL1Q9HAV7 217 aa20.99■□□□□ 0.95
ATG3-208ENST00000495756 RAB20Q9NX57 234 aa20.99■□□□□ 0.95
ATG3-208ENST00000495756 GCNT4Q9P109 453 aa20.99■□□□□ 0.95
ATG3-208ENST00000495756 R3HCC1Q9Y3T6 440 aaKnown RBP20.99■□□□□ 0.95
ATG3-208ENST00000495756 MRPL42Q9Y6G3 142 aaKnown RBP20.99■□□□□ 0.95
ATG3-208ENST00000495756 GRXCR1A8MXD5 290 aa20.98■□□□□ 0.95
ATG3-208ENST00000495756 CBFA2T2O43439 604 aa20.98■□□□□ 0.95
ATG3-208ENST00000495756 RABGGTBP53611 331 aa20.98■□□□□ 0.95
ATG3-208ENST00000495756 MYL6P60660 151 aa20.98■□□□□ 0.95
ATG3-208ENST00000495756 EXOC3L4Q17RC7 722 aa20.98■□□□□ 0.95
ATG3-208ENST00000495756 TDHQ8IZJ6 230 aa20.98■□□□□ 0.95
ATG3-208ENST00000495756 LRRC52Q8N7C0 313 aa20.98■□□□□ 0.95
ATG3-208ENST00000495756 RABGGTAQ92696 567 aa20.98■□□□□ 0.95
ATG3-208ENST00000495756 TMEM175Q9BSA9 504 aa20.98■□□□□ 0.95
ATG3-208ENST00000495756 PRO3102Q9H379 93 aa20.98■□□□□ 0.95
ATG3-208ENST00000495756 LRRN2O75325 713 aa20.97■□□□□ 0.95
ATG3-208ENST00000495756 TPM3P06753 285 aa20.97■□□□□ 0.95
ATG3-208ENST00000495756 OR1G1P47890 313 aa20.97■□□□□ 0.95
ATG3-208ENST00000495756 CHRDL2Q6WN34 429 aa20.97■□□□□ 0.95
ATG3-208ENST00000495756 FIBCD1Q8N539 461 aa20.97■□□□□ 0.95
ATG3-208ENST00000495756 EHBP1Q8NDI1 1231 aa20.97■□□□□ 0.95
ATG3-208ENST00000495756 LMO3Q8TAP4 145 aa20.97■□□□□ 0.95
ATG3-208ENST00000495756 HPDLQ96IR7 371 aa20.97■□□□□ 0.95
ATG3-208ENST00000495756 ERGIC2Q96RQ1 377 aa20.97■□□□□ 0.95
ATG3-208ENST00000495756 TRIM5Q9C035 493 aa20.97■□□□□ 0.95
ATG3-208ENST00000495756 XYLT2Q9H1B5 865 aa20.97■□□□□ 0.95
ATG3-208ENST00000495756 SCN1AP35498 2009 aa20.96■□□□□ 0.95
ATG3-208ENST00000495756 LCHNA4D1U4 455 aa20.96■□□□□ 0.95
ATG3-208ENST00000495756 ASS1P00966 412 aaKnown RBP20.96■□□□□ 0.95
ATG3-208ENST00000495756 ALDH2P05091 517 aa20.96■□□□□ 0.95
ATG3-208ENST00000495756 ATICP31939 592 aa20.96■□□□□ 0.95
ATG3-208ENST00000495756 SLC11A1P49279 550 aa20.96■□□□□ 0.95
ATG3-208ENST00000495756 BCAR1P56945 870 aa20.96■□□□□ 0.95
ATG3-208ENST00000495756 KCNMA1Q12791 1236 aa20.96■□□□□ 0.95
ATG3-208ENST00000495756 SGSM1Q2NKQ1 1148 aa20.96■□□□□ 0.95
ATG3-208ENST00000495756 DCLRE1AQ6PJP8 1040 aa20.96■□□□□ 0.95
ATG3-208ENST00000495756 C3orf58Q8NDZ4 430 aa20.96■□□□□ 0.95
ATG3-208ENST00000495756 TAF4BQ92750 862 aa20.96■□□□□ 0.95
ATG3-208ENST00000495756 ZNF560Q96MR9 790 aa20.96■□□□□ 0.95
ATG3-208ENST00000495756 PI4K2AQ9BTU6 479 aa20.96■□□□□ 0.95
ATG3-208ENST00000495756 INTS2Q9H0H0 1204 aaKnown RBP20.96■□□□□ 0.95
ATG3-208ENST00000495756 CHD9Q3L8U1 2897 aa20.96■□□□□ 0.95
ATG3-208ENST00000495756 NRP1O14786 923 aa20.95■□□□□ 0.94
ATG3-208ENST00000495756 B3GAT3O94766 335 aa20.95■□□□□ 0.94
ATG3-208ENST00000495756 GALTP07902 379 aa20.95■□□□□ 0.94
ATG3-208ENST00000495756 SLC9A1P19634 815 aa20.95■□□□□ 0.94
ATG3-208ENST00000495756 IGFBP6P24592 240 aaPredicted RBP20.95■□□□□ 0.94
ATG3-208ENST00000495756 PON1P27169 355 aa20.95■□□□□ 0.94
ATG3-208ENST00000495756 PNPLA4P41247 253 aa20.95■□□□□ 0.94
ATG3-208ENST00000495756 MYO1EQ12965 1108 aa20.95■□□□□ 0.94
ATG3-208ENST00000495756 SYCP1Q15431 976 aa20.95■□□□□ 0.94
ATG3-208ENST00000495756 ZNF699Q32M78 642 aa20.95■□□□□ 0.94
ATG3-208ENST00000495756 SPOUT1Q5T280 376 aaKnown RBP20.95■□□□□ 0.94
ATG3-208ENST00000495756 TRIM65Q6PJ69 517 aa20.95■□□□□ 0.94
ATG3-208ENST00000495756 IMPG2Q9BZV3 1241 aa20.95■□□□□ 0.94
ATG3-208ENST00000495756 VRTNQ9H8Y1 702 aa20.95■□□□□ 0.94
ATG3-208ENST00000495756 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.95■□□□□ 0.94
ATG3-208ENST00000495756 SIK3Q9Y2K2 1263 aa20.95■□□□□ 0.94
ATG3-208ENST00000495756 FAN1Q9Y2M0 1017 aa20.95■□□□□ 0.94
ATG3-208ENST00000495756 PRG3Q9Y2Y8 225 aaPredicted RBP20.95■□□□□ 0.94
ATG3-208ENST00000495756 PCDHA11Q9Y5I1 949 aa20.95■□□□□ 0.94
ATG3-208ENST00000495756 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.94■□□□□ 0.94
ATG3-208ENST00000495756 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.94■□□□□ 0.94
ATG3-208ENST00000495756 A0A1W2PQC6 194 aa20.94■□□□□ 0.94
ATG3-208ENST00000495756 F8W810 466 aa20.94■□□□□ 0.94
ATG3-208ENST00000495756 KIF4AO95239 1232 aa20.94■□□□□ 0.94
ATG3-208ENST00000495756 STAU1O95793 577 aaKnown RBP20.94■□□□□ 0.94
ATG3-208ENST00000495756 LAG3P18627 525 aa20.94■□□□□ 0.94
ATG3-208ENST00000495756 PBX3P40426 434 aa20.94■□□□□ 0.94
ATG3-208ENST00000495756 ALDH7A1P49419 539 aaKnown RBP20.94■□□□□ 0.94
ATG3-208ENST00000495756 TAF6P49848 677 aa20.94■□□□□ 0.94
ATG3-208ENST00000495756 LILRA4P59901 499 aa20.94■□□□□ 0.94
ATG3-208ENST00000495756 PTPN21Q16825 1174 aa20.94■□□□□ 0.94
ATG3-208ENST00000495756 WDR44Q5JSH3 913 aa20.94■□□□□ 0.94
ATG3-208ENST00000495756 CCDC150Q8NCX0 1101 aa20.94■□□□□ 0.94
ATG3-208ENST00000495756 CLP1Q92989 425 aaKnown RBP20.94■□□□□ 0.94
ATG3-208ENST00000495756 ELMO3Q96BJ8 720 aa20.94■□□□□ 0.94
ATG3-208ENST00000495756 COLEC11Q9BWP8 271 aa20.94■□□□□ 0.94
ATG3-208ENST00000495756 GBF1Q92538 1859 aa20.94■□□□□ 0.94
ATG3-208ENST00000495756 TMEM189-UBE2V1I3L0A0 370 aa20.94■□□□□ 0.94
ATG3-208ENST00000495756 SPTLC1O15269 473 aa20.94■□□□□ 0.94
ATG3-208ENST00000495756 CLSTN1O94985 981 aa20.94■□□□□ 0.94
ATG3-208ENST00000495756 ITGB1P05556 798 aa20.94■□□□□ 0.94
ATG3-208ENST00000495756 LINC00271P0C7V0 271 aa20.94■□□□□ 0.94
ATG3-208ENST00000495756 MYOGP15173 224 aa20.94■□□□□ 0.94
ATG3-208ENST00000495756 PBX1P40424 430 aa20.94■□□□□ 0.94
ATG3-208ENST00000495756 MRE11P49959 708 aa20.94■□□□□ 0.94
ATG3-208ENST00000495756 NOP14P78316 857 aaKnown RBP20.94■□□□□ 0.94
ATG3-208ENST00000495756 SV2CQ496J9 727 aa20.94■□□□□ 0.94
ATG3-208ENST00000495756 SPOPLQ6IQ16 392 aa20.94■□□□□ 0.94
ATG3-208ENST00000495756 KCNT2Q6UVM3 1135 aa20.94■□□□□ 0.94
ATG3-208ENST00000495756 CD300LGQ6UXG3 332 aa20.94■□□□□ 0.94
ATG3-208ENST00000495756 ZNF558Q96NG5 402 aa20.94■□□□□ 0.94
ATG3-208ENST00000495756 MARCH5Q9NX47 278 aa20.94■□□□□ 0.94
ATG3-208ENST00000495756 KIAA1671Q9BY89 1806 aa20.93■□□□□ 0.94
ATG3-208ENST00000495756 CARNS1A5YM72 827 aa20.93■□□□□ 0.94
ATG3-208ENST00000495756 KPNA7A9QM74 516 aa20.93■□□□□ 0.94
ATG3-208ENST00000495756 KLK7P49862 253 aa20.93■□□□□ 0.94
ATG3-208ENST00000495756 ZNF75DP51815 510 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms