RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 RIN2Q8WYP3 895 aaPredicted RBP13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 MFSD14AQ96MC6 490 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 ZNF560Q96MR9 790 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 CGRRF1Q99675 332 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 TTPALQ9BTX7 342 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 VN1R3Q9BXE9 311 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 MTMR12Q9C0I1 747 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 INTS13Q9NVM9 706 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 DACH1Q9UI36 760 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 ITGA11Q9UKX5 1188 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 CTNND2Q9UQB3 1225 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 PCDHGC5Q9Y5F6 944 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 IRAK3Q9Y616 596 aa13.06□□□□□ -0.32
CSNK1E-213ENST00000495232 PRUNE2Q8WUY3 3088 aa13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 PPP1R3GB7ZBB8 358 aa13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 I3L4J1 428 aa13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 PER2O15055 1255 aa13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 MAPK13O15264 365 aa13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 CLSTN1O94985 981 aa13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 KLRC2P26717 231 aa13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 PNPLA4P41247 253 aa13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 BRCC3P46736 316 aa13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 CASP4P49662 377 aa13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 TAF6P49848 677 aa13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 AP3M2P53677 418 aa13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 WNT7BP56706 349 aa13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 RBP5P82980 135 aa13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 PAK1Q13153 545 aa13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 PTPN14Q15678 1187 aa13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 SV2CQ496J9 727 aa13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 ZCWPW2Q504Y3 356 aa13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 CCDC183Q5T5S1 534 aa13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 LMBRD2Q68DH5 695 aaPredicted RBP13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 INTS8Q75QN2 995 aaKnown RBP13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 ADGRD2Q7Z7M1 963 aa13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 PPFIBP1Q86W92 1011 aa13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 RNF168Q8IYW5 571 aaPredicted RBP13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 MLKLQ8NB16 471 aa13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 C3orf58Q8NDZ4 430 aa13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 APPL2Q8NEU8 664 aa13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 SYAP1Q96A49 352 aaPredicted RBP13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 B3GALT6Q96L58 329 aa13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 CHST7Q9NS84 486 aa13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 AGAP1Q9UPQ3 857 aa13.05□□□□□ -0.32
CSNK1E-213ENST00000495232 ATG2AQ2TAZ0 1938 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 ANO9A1A5B4 782 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 TRIM49BA6NDI0 452 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 PIRO00625 290 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 SYN3O14994 580 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 PHACTR2O75167 634 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 AKAP3O75969 853 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 FGFR1OPO95684 399 aaKnown RBP13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 EFEMP2O95967 443 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 ADH1AP07327 375 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 ODC1P11926 461 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 CD44P16070 742 aaKnown RBP13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 BMP6P22004 513 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 POLR2BP30876 1174 aaKnown RBP13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 VAMP7P51809 220 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 LILRA4P59901 499 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 HYAL1Q12794 435 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 MYO1EQ12965 1108 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 TRPC3Q13507 836 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 DUSP6Q16828 381 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 RTP2Q5QGT7 225 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 KIAA0319Q5VV43 1072 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 SASS6Q6UVJ0 657 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 ANKS3Q6ZW76 656 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 GPR65Q8IYL9 337 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 C1orf127Q8N9H9 656 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 PARD3BQ8TEW8 1205 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 HLA-CQ95604 372 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 EEF2KMTQ96G04 330 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 SUSD3Q96L08 255 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 POP1Q99575 1024 aaKnown RBP13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 MKNK1Q9BUB5 465 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 CLDND1Q9NY35 253 aa13.04□□□□□ -0.32
CSNK1E-213ENST00000495232 XIRP2A4UGR9 3374 aa13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 SPDYE4A6NLX3 237 aa13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 H7C4K7 107 aa13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 SLC16A3O15427 465 aaKnown RBP13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 CNPP09543 421 aaKnown RBP13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 FGFR3P22607 806 aa13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 IGFBP6P24592 240 aaPredicted RBP13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 TKTP29401 623 aaKnown RBP13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 NDUFV1P49821 464 aa13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 PMS1P54277 932 aaKnown RBP13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 STX17P56962 302 aa13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 NLRP12P59046 1061 aa13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 BFSP1Q12934 665 aa13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 BIRC3Q13489 604 aa13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 PSMD5Q16401 504 aa13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 TPD52L1Q16890 204 aaPredicted RBP13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 ELMSAN1Q6PJG2 1045 aa13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 CD300LGQ6UXG3 332 aa13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 TRAPPC11Q7Z392 1133 aa13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 METTL23Q86XA0 190 aa13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 TMEM130Q8N3G9 435 aa13.03□□□□□ -0.32
CSNK1E-213ENST00000495232 LRRC52Q8N7C0 313 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms