RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 FCER1AP12319 257 aa5.53□□□□□ -1.52
VPS50-219ENST00000495039 HOXB6P17509 224 aaKnown RBP5.53□□□□□ -1.52
VPS50-219ENST00000495039 MALLQ13021 153 aa5.53□□□□□ -1.52
VPS50-219ENST00000495039 RUVBL1Q9Y265 456 aaKnown RBP5.53□□□□□ -1.52
VPS50-219ENST00000495039 ZEB2O60315 1214 aa5.52□□□□□ -1.53
VPS50-219ENST00000495039 MCAMP43121 646 aa5.52□□□□□ -1.53
VPS50-219ENST00000495039 MGAT2Q10469 447 aa5.52□□□□□ -1.53
VPS50-219ENST00000495039 SLC10A2Q12908 348 aaPredicted RBP5.52□□□□□ -1.53
VPS50-219ENST00000495039 MTM1Q13496 603 aa5.52□□□□□ -1.53
VPS50-219ENST00000495039 PTPRRQ15256 657 aa5.52□□□□□ -1.53
VPS50-219ENST00000495039 LLGL1Q15334 1064 aa5.52□□□□□ -1.53
VPS50-219ENST00000495039 KCNK18Q7Z418 384 aa5.52□□□□□ -1.53
VPS50-219ENST00000495039 CLNKQ7Z7G1 428 aa5.52□□□□□ -1.53
VPS50-219ENST00000495039 TOR1AIP2Q8NFQ8 470 aa5.52□□□□□ -1.53
VPS50-219ENST00000495039 TGFBRAP1Q8WUH2 860 aa5.52□□□□□ -1.53
VPS50-219ENST00000495039 PGBD1Q96JS3 809 aa5.52□□□□□ -1.53
VPS50-219ENST00000495039 TTC1Q99614 292 aa5.52□□□□□ -1.53
VPS50-219ENST00000495039 MAPRE3Q9UPY8 281 aa5.52□□□□□ -1.53
VPS50-219ENST00000495039 APOBEC2Q9Y235 224 aaKnown RBP5.52□□□□□ -1.53
VPS50-219ENST00000495039 AOX1Q06278 1338 aa5.51□□□□□ -1.53
VPS50-219ENST00000495039 PRAMEF33A0A0G2JMD5 474 aa5.51□□□□□ -1.53
VPS50-219ENST00000495039 TCRBV7S2A1N4TA0A589 114 aa5.51□□□□□ -1.53
VPS50-219ENST00000495039 FAM171A2A8MVW0 826 aa5.51□□□□□ -1.53
VPS50-219ENST00000495039 NEMP1O14524 444 aa5.51□□□□□ -1.53
VPS50-219ENST00000495039 KIAA0391O15091 583 aaKnown RBP5.51□□□□□ -1.53
VPS50-219ENST00000495039 PDE8AO60658 829 aa5.51□□□□□ -1.53
VPS50-219ENST00000495039 PRAMEF10O60809 474 aa5.51□□□□□ -1.53
VPS50-219ENST00000495039 PTGER1P34995 402 aa5.51□□□□□ -1.53
VPS50-219ENST00000495039 SLC6A9P48067 706 aa5.51□□□□□ -1.53
VPS50-219ENST00000495039 RPS7P62081 194 aaKnown RBP5.51□□□□□ -1.53
VPS50-219ENST00000495039 CREMQ03060 361 aa5.51□□□□□ -1.53
VPS50-219ENST00000495039 EIF2B5Q13144 721 aaKnown RBP5.51□□□□□ -1.53
VPS50-219ENST00000495039 ATP2B3Q16720 1220 aa5.51□□□□□ -1.53
VPS50-219ENST00000495039 VGLL2Q8N8G2 317 aa5.51□□□□□ -1.53
VPS50-219ENST00000495039 NLGN4YQ8NFZ3 816 aaPredicted RBP5.51□□□□□ -1.53
VPS50-219ENST00000495039 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.51□□□□□ -1.53
VPS50-219ENST00000495039 SLC30A5Q8TAD4 765 aa5.51□□□□□ -1.53
VPS50-219ENST00000495039 CCHCR1Q8TD31 782 aa5.51□□□□□ -1.53
VPS50-219ENST00000495039 ORAI2Q96SN7 254 aa5.51□□□□□ -1.53
VPS50-219ENST00000495039 PIF1Q9H611 641 aa5.51□□□□□ -1.53
VPS50-219ENST00000495039 NEU2Q9Y3R4 380 aa5.51□□□□□ -1.53
VPS50-219ENST00000495039 A0A087X0B3 334 aa5.5□□□□□ -1.53
VPS50-219ENST00000495039 LINC01548A6NM66 108 aa5.5□□□□□ -1.53
VPS50-219ENST00000495039 GOLGA8AA7E2F4 631 aa5.5□□□□□ -1.53
VPS50-219ENST00000495039 ADM5C9JUS6 153 aa5.5□□□□□ -1.53
VPS50-219ENST00000495039 GCOM1H8Y6P7 765 aaPredicted RBP5.5□□□□□ -1.53
VPS50-219ENST00000495039 KCNAB3O43448 404 aa5.5□□□□□ -1.53
VPS50-219ENST00000495039 BMP15O95972 392 aa5.5□□□□□ -1.53
VPS50-219ENST00000495039 ELFN1P0C7U0 828 aa5.5□□□□□ -1.53
VPS50-219ENST00000495039 GSPT1P15170 499 aaKnown RBP5.5□□□□□ -1.53
VPS50-219ENST00000495039 KCNA2P16389 499 aa5.5□□□□□ -1.53
VPS50-219ENST00000495039 SSBP2P81877 361 aaPredicted RBP5.5□□□□□ -1.53
VPS50-219ENST00000495039 FPGSQ05932 587 aa5.5□□□□□ -1.53
VPS50-219ENST00000495039 SEPT2Q15019 361 aa5.5□□□□□ -1.53
VPS50-219ENST00000495039 FAM153CQ494X1 144 aa5.5□□□□□ -1.53
VPS50-219ENST00000495039 MTX3Q5HYI7 312 aa5.5□□□□□ -1.53
VPS50-219ENST00000495039 LMBR1Q8WVP7 490 aa5.5□□□□□ -1.53
VPS50-219ENST00000495039 LPIN2Q92539 896 aa5.5□□□□□ -1.53
VPS50-219ENST00000495039 BRIP1Q9BX63 1249 aa5.5□□□□□ -1.53
VPS50-219ENST00000495039 MANSC1Q9H8J5 431 aa5.5□□□□□ -1.53
VPS50-219ENST00000495039 LINC00473A8K010 186 aa5.49□□□□□ -1.53
VPS50-219ENST00000495039 HAUS5O94927 633 aa5.49□□□□□ -1.53
VPS50-219ENST00000495039 CHRM2P08172 466 aa5.49□□□□□ -1.53
VPS50-219ENST00000495039 ID4P47928 161 aa5.49□□□□□ -1.53
VPS50-219ENST00000495039 GRM1Q13255 1194 aa5.49□□□□□ -1.53
VPS50-219ENST00000495039 TXNRD1Q16881 649 aa5.49□□□□□ -1.53
VPS50-219ENST00000495039 TOR2AQ5JU69 321 aa5.49□□□□□ -1.53
VPS50-219ENST00000495039 DACT2Q5SW24 774 aa5.49□□□□□ -1.53
VPS50-219ENST00000495039 TSHZ1Q6ZSZ6 1077 aa5.49□□□□□ -1.53
VPS50-219ENST00000495039 SEMA6DQ8NFY4 1073 aa5.49□□□□□ -1.53
VPS50-219ENST00000495039 ZBTB9Q96C00 473 aa5.49□□□□□ -1.53
VPS50-219ENST00000495039 FCRL4Q96PJ5 515 aa5.49□□□□□ -1.53
VPS50-219ENST00000495039 HAPLN3Q96S86 360 aa5.49□□□□□ -1.53
VPS50-219ENST00000495039 AMY1AP04745 511 aa5.48□□□□□ -1.53
VPS50-219ENST00000495039 IGKV2-30P06310 120 aa5.48□□□□□ -1.53
VPS50-219ENST00000495039 MYCLP1P12525 358 aaPredicted RBP5.48□□□□□ -1.53
VPS50-219ENST00000495039 DDCP20711 480 aa5.48□□□□□ -1.53
VPS50-219ENST00000495039 GATA3P23771 443 aa5.48□□□□□ -1.53
VPS50-219ENST00000495039 SLC5A3P53794 718 aa5.48□□□□□ -1.53
VPS50-219ENST00000495039 ATP8B2P98198 1209 aa5.48□□□□□ -1.53
VPS50-219ENST00000495039 ZNF626Q68DY1 528 aa5.48□□□□□ -1.53
VPS50-219ENST00000495039 SUMO4Q6EEV6 95 aa5.48□□□□□ -1.53
VPS50-219ENST00000495039 C11orf87Q6NUJ2 197 aa5.48□□□□□ -1.53
VPS50-219ENST00000495039 CMIPQ8IY22 773 aa5.48□□□□□ -1.53
VPS50-219ENST00000495039 MYCBPAPQ8TBZ2 947 aa5.48□□□□□ -1.53
VPS50-219ENST00000495039 C11orf54Q9H0W9 315 aaPredicted RBP5.48□□□□□ -1.53
VPS50-219ENST00000495039 ADAM21Q9UKJ8 722 aa5.48□□□□□ -1.53
VPS50-219ENST00000495039 TP73O15350 636 aa5.47□□□□□ -1.53
VPS50-219ENST00000495039 PRR35P0CG20 571 aa5.47□□□□□ -1.53
VPS50-219ENST00000495039 ZNF844Q08AG5 666 aa5.47□□□□□ -1.53
VPS50-219ENST00000495039 CD300EQ496F6 205 aaPredicted RBP5.47□□□□□ -1.53
VPS50-219ENST00000495039 PREPLQ4J6C6 727 aaPredicted RBP5.47□□□□□ -1.53
VPS50-219ENST00000495039 KIAA0907Q7Z7F0 614 aaPredicted RBP5.47□□□□□ -1.53
VPS50-219ENST00000495039 ZGPATQ8N5A5 531 aaKnown RBP5.47□□□□□ -1.53
VPS50-219ENST00000495039 TLR10Q9BXR5 811 aa5.47□□□□□ -1.53
VPS50-219ENST00000495039 SEMA4CQ9C0C4 833 aa5.47□□□□□ -1.53
VPS50-219ENST00000495039 PADI4Q9UM07 663 aa5.47□□□□□ -1.53
VPS50-219ENST00000495039 ST3GAL5Q9UNP4 418 aa5.47□□□□□ -1.53
VPS50-219ENST00000495039 CDYLQ9Y232 598 aa5.47□□□□□ -1.53
VPS50-219ENST00000495039 MYBBP1AQ9BQG0 1328 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms