RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 ITFG1Q8TB96 612 aa11.55□□□□□ -0.56
NELFE-213ENST00000494956 HDAC7Q8WUI4 952 aa11.55□□□□□ -0.56
NELFE-213ENST00000494956 KCNN1Q92952 543 aa11.55□□□□□ -0.56
NELFE-213ENST00000494956 DHX58Q96C10 678 aa11.55□□□□□ -0.56
NELFE-213ENST00000494956 ACSF2Q96CM8 615 aaPredicted RBP11.55□□□□□ -0.56
NELFE-213ENST00000494956 SUSD3Q96L08 255 aa11.55□□□□□ -0.56
NELFE-213ENST00000494956 ZNF396Q96N95 335 aaPredicted RBP11.55□□□□□ -0.56
NELFE-213ENST00000494956 STRA6Q9BX79 667 aa11.55□□□□□ -0.56
NELFE-213ENST00000494956 MRPL44Q9H9J2 332 aaKnown RBP11.55□□□□□ -0.56
NELFE-213ENST00000494956 KCNK12Q9HB15 430 aa11.55□□□□□ -0.56
NELFE-213ENST00000494956 DNMT3BQ9UBC3 853 aaKnown RBP11.55□□□□□ -0.56
NELFE-213ENST00000494956 FBXL5Q9UKA1 691 aa11.55□□□□□ -0.56
NELFE-213ENST00000494956 TSC2P49815 1807 aa11.55□□□□□ -0.56
NELFE-213ENST00000494956 COL4A3Q01955 1670 aa11.55□□□□□ -0.56
NELFE-213ENST00000494956 NRG2O14511 850 aaPredicted RBP11.54□□□□□ -0.56
NELFE-213ENST00000494956 TRAPPC3O43617 180 aa11.54□□□□□ -0.56
NELFE-213ENST00000494956 PRPF6O94906 941 aaKnown RBP11.54□□□□□ -0.56
NELFE-213ENST00000494956 GCNT3O95395 438 aa11.54□□□□□ -0.56
NELFE-213ENST00000494956 PAPLNO95428 1278 aa11.54□□□□□ -0.56
NELFE-213ENST00000494956 SEC24AO95486 1093 aa11.54□□□□□ -0.56
NELFE-213ENST00000494956 LRPAP1P30533 357 aa11.54□□□□□ -0.56
NELFE-213ENST00000494956 RPL9P32969 192 aaKnown RBP11.54□□□□□ -0.56
NELFE-213ENST00000494956 PLA2G5P39877 138 aa11.54□□□□□ -0.56
NELFE-213ENST00000494956 DNM1Q05193 864 aaKnown RBP11.54□□□□□ -0.56
NELFE-213ENST00000494956 MRPL58Q14197 206 aaKnown RBP11.54□□□□□ -0.56
NELFE-213ENST00000494956 E2F4Q16254 413 aa11.54□□□□□ -0.56
NELFE-213ENST00000494956 CTXN3Q4LDR2 81 aa11.54□□□□□ -0.56
NELFE-213ENST00000494956 ADALQ6DHV7 355 aa11.54□□□□□ -0.56
NELFE-213ENST00000494956 ELMSAN1Q6PJG2 1045 aa11.54□□□□□ -0.56
NELFE-213ENST00000494956 POTEHQ6S545 545 aa11.54□□□□□ -0.56
NELFE-213ENST00000494956 CRELD2Q6UXH1 353 aaPredicted RBP11.54□□□□□ -0.56
NELFE-213ENST00000494956 CCDC73Q6ZRK6 1079 aa11.54□□□□□ -0.56
NELFE-213ENST00000494956 BMP8AQ7Z5Y6 402 aa11.54□□□□□ -0.56
NELFE-213ENST00000494956 FBXL6Q8N531 539 aa11.54□□□□□ -0.56
NELFE-213ENST00000494956 PRSS33Q8NF86 280 aa11.54□□□□□ -0.56
NELFE-213ENST00000494956 ING5Q8WYH8 240 aa11.54□□□□□ -0.56
NELFE-213ENST00000494956 FAM122AQ96E09 287 aa11.54□□□□□ -0.56
NELFE-213ENST00000494956 SAAL1Q96ER3 474 aa11.54□□□□□ -0.56
NELFE-213ENST00000494956 RPP25Q9BUL9 199 aaKnown RBP11.54□□□□□ -0.56
NELFE-213ENST00000494956 ST6GALNAC4Q9H4F1 302 aa11.54□□□□□ -0.56
NELFE-213ENST00000494956 PLEKHA5Q9HAU0 1116 aa11.54□□□□□ -0.56
NELFE-213ENST00000494956 PANK4Q9NVE7 773 aa11.54□□□□□ -0.56
NELFE-213ENST00000494956 DPP7Q9UHL4 492 aa11.54□□□□□ -0.56
NELFE-213ENST00000494956 AGO2Q9UKV8 859 aaKnown RBP11.54□□□□□ -0.56
NELFE-213ENST00000494956 UBQLN1Q9UMX0 589 aaKnown RBP11.54□□□□□ -0.56
NELFE-213ENST00000494956 BACE2Q9Y5Z0 518 aa11.54□□□□□ -0.56
NELFE-213ENST00000494956 MORC2Q9Y6X9 1032 aaPredicted RBP11.54□□□□□ -0.56
NELFE-213ENST00000494956 FRMD3A2A2Y4 597 aa11.53□□□□□ -0.56
NELFE-213ENST00000494956 GOLGA8IPA6NC78 632 aa11.53□□□□□ -0.56
NELFE-213ENST00000494956 GOLGA8JA6NMD2 632 aa11.53□□□□□ -0.56
NELFE-213ENST00000494956 SYN3O14994 580 aa11.53□□□□□ -0.56
NELFE-213ENST00000494956 SPTLC1O15269 473 aa11.53□□□□□ -0.56
NELFE-213ENST00000494956 PPP6R2O75170 966 aa11.53□□□□□ -0.56
NELFE-213ENST00000494956 ADRB2P07550 413 aa11.53□□□□□ -0.56
NELFE-213ENST00000494956 LAMP2P13473 410 aa11.53□□□□□ -0.56
NELFE-213ENST00000494956 FSHRP23945 695 aa11.53□□□□□ -0.56
NELFE-213ENST00000494956 SLC8B1Q6J4K2 584 aa11.53□□□□□ -0.56
NELFE-213ENST00000494956 PDXDC1Q6P996 788 aa11.53□□□□□ -0.56
NELFE-213ENST00000494956 EFCAB13Q8IY85 973 aa11.53□□□□□ -0.56
NELFE-213ENST00000494956 NOC3LQ8WTT2 800 aaKnown RBP11.53□□□□□ -0.56
NELFE-213ENST00000494956 POMGNT1Q8WZA1 660 aa11.53□□□□□ -0.56
NELFE-213ENST00000494956 MFSD14AQ96MC6 490 aa11.53□□□□□ -0.56
NELFE-213ENST00000494956 TMEM209Q96SK2 561 aa11.53□□□□□ -0.56
NELFE-213ENST00000494956 PCIF1Q9H4Z3 704 aa11.53□□□□□ -0.56
NELFE-213ENST00000494956 PCDHA7Q9UN72 937 aa11.53□□□□□ -0.56
NELFE-213ENST00000494956 STYXL1Q9Y6J8 313 aa11.53□□□□□ -0.56
NELFE-213ENST00000494956 CUTAO60888 179 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 ABLIM3O94929 683 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 VNN2O95498 520 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 YEATS4O95619 227 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 C1RP00736 705 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 CFHP08603 1231 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 HNRNPA1P09651 372 aaKnown RBP eCLIP11.52□□□□□ -0.57
NELFE-213ENST00000494956 GAP43P17677 238 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 ADCY1Q08828 1119 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 TDGQ13569 410 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 TMEM132DQ14C87 1099 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 SLC5A9Q2M3M2 681 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 L1TD1Q5T7N2 865 aaKnown RBP11.52□□□□□ -0.57
NELFE-213ENST00000494956 SPATA1Q5VX52 437 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 PARM1Q6UWI2 310 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 CYP26C1Q6V0L0 522 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 DSTYKQ6XUX3 929 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 RNF19BQ6ZMZ0 732 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 SUGP1Q8IWZ8 645 aaKnown RBP11.52□□□□□ -0.57
NELFE-213ENST00000494956 UBALD2Q8IYN6 164 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 GRAMD1CQ8IYS0 662 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 SLC44A3Q8N4M1 653 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 ZNF461Q8TAF7 563 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 FGF14Q92915 247 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 PGLYRP2Q96PD5 576 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 ACCSQ96QU6 501 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 PHOX2BQ99453 314 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 CBWD1Q9BRT8 395 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 FAM213AQ9BRX8 229 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 RHOBTB2Q9BYZ6 727 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 BLZF1Q9H2G9 400 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 CYP4F11Q9HBI6 524 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 EPS15L1Q9UBC2 864 aa11.52□□□□□ -0.57
NELFE-213ENST00000494956 PCDHB8Q9UN66 801 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms