RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 NIF3L1Q9GZT8 377 aa11.85□□□□□ -0.51
PKP4-215ENST00000494945 MCOLN1Q9GZU1 580 aa11.85□□□□□ -0.51
PKP4-215ENST00000494945 XYLT2Q9H1B5 865 aa11.85□□□□□ -0.51
PKP4-215ENST00000494945 HIPK3Q9H422 1215 aa11.85□□□□□ -0.51
PKP4-215ENST00000494945 FAM124BQ9H5Z6 455 aaPredicted RBP11.85□□□□□ -0.51
PKP4-215ENST00000494945 APOBEC3GQ9HC16 384 aaKnown RBP11.85□□□□□ -0.51
PKP4-215ENST00000494945 KLK14Q9P0G3 267 aa11.85□□□□□ -0.51
PKP4-215ENST00000494945 NUB1Q9Y5A7 615 aa11.85□□□□□ -0.51
PKP4-215ENST00000494945 EPN1Q9Y6I3 576 aaPredicted RBP11.85□□□□□ -0.51
PKP4-215ENST00000494945 PTPRDP23468 1912 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 EIF3CLB5ME19 914 aaKnown RBP11.84□□□□□ -0.51
PKP4-215ENST00000494945 ZNF500O60304 480 aaPredicted RBP11.84□□□□□ -0.51
PKP4-215ENST00000494945 EVI5O60447 810 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 NBNO60934 754 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 GFPT2O94808 682 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 CLSTN1O94985 981 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 NDUFA10O95299 355 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 IPO7O95373 1038 aaKnown RBP11.84□□□□□ -0.51
PKP4-215ENST00000494945 LCA5LO95447 670 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 EOMESO95936 686 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 CCDC175P0C221 793 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 P4HA1P13674 534 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 POLR2BP30876 1174 aaKnown RBP11.84□□□□□ -0.51
PKP4-215ENST00000494945 EIF4A3P38919 411 aaKnown RBP11.84□□□□□ -0.51
PKP4-215ENST00000494945 YWHAEP62258 255 aaKnown RBP11.84□□□□□ -0.51
PKP4-215ENST00000494945 ARID5AQ03989 594 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 MTF1Q14872 753 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 ZNF667Q5HYK9 610 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 SPOPLQ6IQ16 392 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 AGMOQ6ZNB7 445 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 TOGARAM2Q6ZUX3 1019 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 SLC24A5Q71RS6 500 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 ZNF598Q86UK7 904 aaKnown RBP11.84□□□□□ -0.51
PKP4-215ENST00000494945 VPS36Q86VN1 386 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 ECHDC2Q86YB7 292 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 CCAR2Q8N163 923 aaKnown RBP11.84□□□□□ -0.51
PKP4-215ENST00000494945 LRRC52Q8N7C0 313 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 SEPT8Q92599 483 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 KAT5Q92993 513 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 PPP1R10Q96QC0 940 aaKnown RBP11.84□□□□□ -0.51
PKP4-215ENST00000494945 RPS6KC1Q96S38 1066 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 EIF3CQ99613 913 aaKnown RBP11.84□□□□□ -0.51
PKP4-215ENST00000494945 CXCL16Q9H2A7 254 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 TSPYL2Q9H2G4 693 aaPredicted RBP11.84□□□□□ -0.51
PKP4-215ENST00000494945 DEF6Q9H4E7 631 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.84□□□□□ -0.516e-11■■■■■ 47.9
PKP4-215ENST00000494945 SLC38A7Q9NVC3 462 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 TBX21Q9UL17 535 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 AGAP1Q9UPQ3 857 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 ATP11BQ9Y2G3 1177 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 ADGRG1Q9Y653 693 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 VWA8A3KMH1 1905 aa11.84□□□□□ -0.51
PKP4-215ENST00000494945 GOLGA6L9A6NEM1 432 aa11.83□□□□□ -0.52
PKP4-215ENST00000494945 C9IYK1 514 aa11.83□□□□□ -0.52
PKP4-215ENST00000494945 INPPL1O15357 1258 aa11.83□□□□□ -0.52
PKP4-215ENST00000494945 AKR1B10O60218 316 aa11.83□□□□□ -0.52
PKP4-215ENST00000494945 OFD1O75665 1012 aa11.83□□□□□ -0.52
PKP4-215ENST00000494945 CXCL10P02778 98 aa11.83□□□□□ -0.52
PKP4-215ENST00000494945 PLEKP08567 350 aaPredicted RBP11.83□□□□□ -0.52
PKP4-215ENST00000494945 CLTBP09497 229 aa11.83□□□□□ -0.52
PKP4-215ENST00000494945 PNMA6AP0CW24 399 aaPredicted RBP11.83□□□□□ -0.52
PKP4-215ENST00000494945 ATF7P17544 494 aaPredicted RBP11.83□□□□□ -0.52
PKP4-215ENST00000494945 RFC2P35250 354 aa11.83□□□□□ -0.52
PKP4-215ENST00000494945 KIF11P52732 1056 aa11.83□□□□□ -0.52
PKP4-215ENST00000494945 KRT83P78385 493 aa11.83□□□□□ -0.52
PKP4-215ENST00000494945 FAM189BP81408 668 aa11.83□□□□□ -0.52
PKP4-215ENST00000494945 MYO1EQ12965 1108 aa11.83□□□□□ -0.52
PKP4-215ENST00000494945 GPNMBQ14956 572 aa11.83□□□□□ -0.52
PKP4-215ENST00000494945 ASTE1Q2TB18 679 aaPredicted RBP11.83□□□□□ -0.52
PKP4-215ENST00000494945 GLRA4Q5JXX5 417 aa11.83□□□□□ -0.52
PKP4-215ENST00000494945 C9orf57Q5W0N0 161 aa11.83□□□□□ -0.52
PKP4-215ENST00000494945 LINC01599Q8WXQ3 324 aa11.83□□□□□ -0.52
PKP4-215ENST00000494945 HPDLQ96IR7 371 aa11.83□□□□□ -0.52
PKP4-215ENST00000494945 ZNF560Q96MR9 790 aa11.83□□□□□ -0.52
PKP4-215ENST00000494945 HAUS4Q9H6D7 363 aa11.83□□□□□ -0.52
PKP4-215ENST00000494945 RSAD1Q9HA92 442 aa11.83□□□□□ -0.52
PKP4-215ENST00000494945 SPTLC3Q9NUV7 552 aa11.83□□□□□ -0.52
PKP4-215ENST00000494945 RNF216Q9NWF9 866 aaPredicted RBP11.83□□□□□ -0.52
PKP4-215ENST00000494945 TUBGCP4Q9UGJ1 667 aa11.83□□□□□ -0.52
PKP4-215ENST00000494945 CNTN6Q9UQ52 1028 aa11.83□□□□□ -0.52
PKP4-215ENST00000494945 PPP2R2CQ9Y2T4 447 aa11.83□□□□□ -0.52
PKP4-215ENST00000494945 UMODL1Q5DID0 1318 aa11.83□□□□□ -0.52
PKP4-215ENST00000494945 NLRC5Q86WI3 1866 aa11.83□□□□□ -0.52
PKP4-215ENST00000494945 ANO9A1A5B4 782 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 ARL5CA6NH57 179 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 MEIS3P2A8K0S8 358 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 RBAK-RBAKDNI3L0D1 243 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 PIRO00625 290 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 PTGESO14684 152 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 THP07101 528 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 ACO1P21399 889 aaKnown RBP11.82□□□□□ -0.52
PKP4-215ENST00000494945 LRPAP1P30533 357 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 MLH1P40692 756 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 USP8P40818 1118 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 PNPLA4P41247 253 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 ASPAP45381 313 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 GUCY2FP51841 1108 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 BPIFB4P59827 614 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 PTK2Q05397 1052 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 BMS1Q14692 1282 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms