RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 SMYD4Q8IYR2 804 aaPredicted RBP18.56■□□□□ 0.56
SNX17-209ENST00000494893 NOC3LQ8WTT2 800 aaKnown RBP18.56■□□□□ 0.56
SNX17-209ENST00000494893 CLSTN2Q9H4D0 955 aa18.56■□□□□ 0.56
SNX17-209ENST00000494893 DMAC2Q9NW81 257 aa18.56■□□□□ 0.56
SNX17-209ENST00000494893 PCDHA5Q9Y5H7 936 aa18.56■□□□□ 0.56
SNX17-209ENST00000494893 PIRO00625 290 aa18.55■□□□□ 0.56
SNX17-209ENST00000494893 SPTLC1O15269 473 aa18.55■□□□□ 0.56
SNX17-209ENST00000494893 C9orf57Q5W0N0 161 aa18.55■□□□□ 0.56
SNX17-209ENST00000494893 KIAA1841Q6NSI8 718 aa18.55■□□□□ 0.56
SNX17-209ENST00000494893 ANKRD54Q6NXT1 300 aa18.55■□□□□ 0.56
SNX17-209ENST00000494893 HS2ST1Q7LGA3 356 aa18.55■□□□□ 0.56
SNX17-209ENST00000494893 CEP57Q86XR8 500 aa18.55■□□□□ 0.56
SNX17-209ENST00000494893 ELOA2Q8IYF1 753 aaPredicted RBP18.55■□□□□ 0.56
SNX17-209ENST00000494893 BEST2Q8NFU1 509 aa18.55■□□□□ 0.56
SNX17-209ENST00000494893 CXorf38Q8TB03 319 aa18.55■□□□□ 0.56
SNX17-209ENST00000494893 SUSD3Q96L08 255 aa18.55■□□□□ 0.56
SNX17-209ENST00000494893 CLSTN3Q9BQT9 956 aa18.55■□□□□ 0.56
SNX17-209ENST00000494893 EMILIN2Q9BXX0 1053 aa18.55■□□□□ 0.56
SNX17-209ENST00000494893 NUP62CLQ9H1M0 184 aa18.55■□□□□ 0.56
SNX17-209ENST00000494893 S1PR5Q9H228 398 aa18.55■□□□□ 0.56
SNX17-209ENST00000494893 FNIP2Q9P278 1114 aa18.55■□□□□ 0.56
SNX17-209ENST00000494893 MAPK8IP1Q9UQF2 711 aa18.55■□□□□ 0.56
SNX17-209ENST00000494893 SSX2IPQ9Y2D8 614 aa18.55■□□□□ 0.56
SNX17-209ENST00000494893 FSD2A1L4K1 749 aa18.54■□□□□ 0.56
SNX17-209ENST00000494893 MBTPS2O43462 519 aa18.54■□□□□ 0.56
SNX17-209ENST00000494893 XPOTO43592 962 aaKnown RBP18.54■□□□□ 0.56
SNX17-209ENST00000494893 IL9P15248 144 aa18.54■□□□□ 0.56
SNX17-209ENST00000494893 KLRC2P26717 231 aa18.54■□□□□ 0.56
SNX17-209ENST00000494893 PSMD5Q16401 504 aa18.54■□□□□ 0.56
SNX17-209ENST00000494893 SNRNP35Q16560 246 aaKnown RBP18.54■□□□□ 0.56
SNX17-209ENST00000494893 AAK1Q2M2I8 961 aa18.54■□□□□ 0.56
SNX17-209ENST00000494893 LMBRD2Q68DH5 695 aaPredicted RBP18.54■□□□□ 0.56
SNX17-209ENST00000494893 GLYCTKQ8IVS8 523 aa18.54■□□□□ 0.56
SNX17-209ENST00000494893 GUF1Q8N442 669 aaKnown RBP18.54■□□□□ 0.56
SNX17-209ENST00000494893 XXYLT1Q8NBI6 393 aa18.54■□□□□ 0.56
SNX17-209ENST00000494893 RDH13Q8NBN7 331 aa18.54■□□□□ 0.56
SNX17-209ENST00000494893 SMRP1Q8NCR6 262 aa18.54■□□□□ 0.56
SNX17-209ENST00000494893 PLEKHO2Q8TD55 490 aa18.54■□□□□ 0.56
SNX17-209ENST00000494893 ANP32EQ9BTT0 268 aa18.54■□□□□ 0.56
SNX17-209ENST00000494893 DPP3Q9NY33 737 aa18.54■□□□□ 0.56
SNX17-209ENST00000494893 CGNQ9P2M7 1197 aaKnown RBP18.54■□□□□ 0.56
SNX17-209ENST00000494893 CD207Q9UJ71 328 aa18.54■□□□□ 0.56
SNX17-209ENST00000494893 CDH22Q9UJ99 828 aa18.54■□□□□ 0.56
SNX17-209ENST00000494893 ZNF233A6NK53 670 aa18.53■□□□□ 0.56
SNX17-209ENST00000494893 M0QZQ0 153 aa18.53■□□□□ 0.56
SNX17-209ENST00000494893 PDXKO00764 312 aa18.53■□□□□ 0.56
SNX17-209ENST00000494893 TBC1D4O60343 1298 aa18.53■□□□□ 0.56
SNX17-209ENST00000494893 LILRA4P59901 499 aa18.53■□□□□ 0.56
SNX17-209ENST00000494893 MRPL58Q14197 206 aaKnown RBP18.53■□□□□ 0.56
SNX17-209ENST00000494893 ZCWPW2Q504Y3 356 aa18.53■□□□□ 0.56
SNX17-209ENST00000494893 PTCRAQ6ISU1 281 aaPredicted RBP18.53■□□□□ 0.56
SNX17-209ENST00000494893 LILRA6Q6PI73 481 aa18.53■□□□□ 0.56
SNX17-209ENST00000494893 SLC9A9Q8IVB4 645 aa18.53■□□□□ 0.56
SNX17-209ENST00000494893 C12orf76Q8N812 135 aaPredicted RBP18.53■□□□□ 0.56
SNX17-209ENST00000494893 C1orf127Q8N9H9 656 aa18.53■□□□□ 0.56
SNX17-209ENST00000494893 OR5B17Q8NGF7 314 aa18.53■□□□□ 0.56
SNX17-209ENST00000494893 TMEM174Q8WUU8 243 aa18.53■□□□□ 0.56
SNX17-209ENST00000494893 CASP10Q92851 521 aa18.53■□□□□ 0.56
SNX17-209ENST00000494893 CCDC47Q96A33 483 aaKnown RBP18.53■□□□□ 0.56
SNX17-209ENST00000494893 BORCS6Q96GS4 357 aa18.53■□□□□ 0.56
SNX17-209ENST00000494893 GSDMAQ96QA5 445 aa18.53■□□□□ 0.56
SNX17-209ENST00000494893 APOL5Q9BWW9 433 aa18.53■□□□□ 0.56
SNX17-209ENST00000494893 KIAA1586Q9HCI6 787 aa18.53■□□□□ 0.56
SNX17-209ENST00000494893 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.53■□□□□ 0.56
SNX17-209ENST00000494893 MTRRQ9UBK8 725 aa18.53■□□□□ 0.56
SNX17-209ENST00000494893 TRAF3IP3Q9Y228 551 aa18.53■□□□□ 0.56
SNX17-209ENST00000494893 NUB1Q9Y5A7 615 aa18.53■□□□□ 0.56
SNX17-209ENST00000494893 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.53■□□□□ 0.56
SNX17-209ENST00000494893 PLXNA3P51805 1871 aa18.52■□□□□ 0.56
SNX17-209ENST00000494893 TRAPPC3O43617 180 aa18.52■□□□□ 0.56
SNX17-209ENST00000494893 ADH1AP07327 375 aa18.52■□□□□ 0.56
SNX17-209ENST00000494893 CASP4P49662 377 aa18.52■□□□□ 0.56
SNX17-209ENST00000494893 TFAMQ00059 246 aaKnown RBP18.52■□□□□ 0.56
SNX17-209ENST00000494893 CYP24A1Q07973 514 aa18.52■□□□□ 0.56
SNX17-209ENST00000494893 SMAD4Q13485 552 aaKnown RBP18.52■□□□□ 0.56
SNX17-209ENST00000494893 VARS2Q5ST30 1063 aaKnown RBP18.52■□□□□ 0.56
SNX17-209ENST00000494893 PPFIBP1Q86W92 1011 aa18.52■□□□□ 0.56
SNX17-209ENST00000494893 PALB2Q86YC2 1186 aa18.52■□□□□ 0.56
SNX17-209ENST00000494893 NT5DC4Q86YG4 428 aa18.52■□□□□ 0.56
SNX17-209ENST00000494893 CCDC34Q96HJ3 373 aa18.52■□□□□ 0.56
SNX17-209ENST00000494893 MFSD14AQ96MC6 490 aa18.52■□□□□ 0.56
SNX17-209ENST00000494893 NECAB3Q96P71 396 aaPredicted RBP18.52■□□□□ 0.56
SNX17-209ENST00000494893 SIX4Q9UIU6 781 aa18.52■□□□□ 0.56
SNX17-209ENST00000494893 PCDHB8Q9UN66 801 aa18.52■□□□□ 0.56
SNX17-209ENST00000494893 SYN3O14994 580 aa18.51■□□□□ 0.55
SNX17-209ENST00000494893 TGM5O43548 720 aa18.51■□□□□ 0.55
SNX17-209ENST00000494893 LETM1O95202 739 aaPredicted RBP18.51■□□□□ 0.55
SNX17-209ENST00000494893 NR3C1P04150 777 aa18.51■□□□□ 0.55
SNX17-209ENST00000494893 SPATA31D3P0C874 917 aa18.51■□□□□ 0.55
SNX17-209ENST00000494893 BMP6P22004 513 aa18.51■□□□□ 0.55
SNX17-209ENST00000494893 PRCPP42785 496 aa18.51■□□□□ 0.55
SNX17-209ENST00000494893 PSMD6Q15008 389 aa18.51■□□□□ 0.55
SNX17-209ENST00000494893 CAMK4Q16566 473 aa18.51■□□□□ 0.55
SNX17-209ENST00000494893 ZSCAN23Q3MJ62 389 aa18.51■□□□□ 0.55
SNX17-209ENST00000494893 SPATA31D4Q6ZUB0 917 aa18.51■□□□□ 0.55
SNX17-209ENST00000494893 GOLGA5Q8TBA6 731 aa18.51■□□□□ 0.55
SNX17-209ENST00000494893 SUSD6Q92537 303 aa18.51■□□□□ 0.55
SNX17-209ENST00000494893 SMARCE1Q969G3 411 aa18.51■□□□□ 0.55
SNX17-209ENST00000494893 POP1Q99575 1024 aaKnown RBP18.51■□□□□ 0.55
SNX17-209ENST00000494893 COL25A1Q9BXS0 654 aaPredicted RBP18.51■□□□□ 0.55
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