RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 SYCP3Q8IZU3 236 aa36.08■■■■□ 3.37
CBX4-203ENST00000494546 SLC7A14Q8TBB6 771 aa36.08■■■■□ 3.37
CBX4-203ENST00000494546 KBTBD4Q9NVX7 518 aa36.08■■■■□ 3.37
CBX4-203ENST00000494546 SORCS3Q9UPU3 1222 aa36.08■■■■□ 3.37
CBX4-203ENST00000494546 H7C4K7 107 aa36.07■■■■□ 3.36
CBX4-203ENST00000494546 GBP2P32456 591 aaPredicted RBP36.07■■■■□ 3.36
CBX4-203ENST00000494546 SIGLEC14Q08ET2 396 aa36.07■■■■□ 3.36
CBX4-203ENST00000494546 POSTNQ15063 836 aa36.07■■■■□ 3.36
CBX4-203ENST00000494546 BEST2Q8NFU1 509 aa36.07■■■■□ 3.36
CBX4-203ENST00000494546 NFICP08651 508 aa36.06■■■■□ 3.36
CBX4-203ENST00000494546 HNRNPA1P09651 372 aaKnown RBP eCLIP36.06■■■■□ 3.36
CBX4-203ENST00000494546 ADSSP30520 456 aa36.06■■■■□ 3.36
CBX4-203ENST00000494546 ARPP19P56211 112 aa36.06■■■■□ 3.36
CBX4-203ENST00000494546 AMPD3Q01432 767 aa36.06■■■■□ 3.36
CBX4-203ENST00000494546 MTMR3Q13615 1198 aa36.06■■■■□ 3.36
CBX4-203ENST00000494546 ALCAMQ13740 583 aa36.06■■■■□ 3.36
CBX4-203ENST00000494546 TMEM132DQ14C87 1099 aa36.06■■■■□ 3.36
CBX4-203ENST00000494546 APPL2Q8NEU8 664 aa36.06■■■■□ 3.36
CBX4-203ENST00000494546 TRIM9Q9C026 710 aa36.06■■■■□ 3.36
CBX4-203ENST00000494546 FAM13BQ9NYF5 915 aa36.06■■■■□ 3.36
CBX4-203ENST00000494546 CCL16O15467 120 aa36.05■■■■□ 3.36
CBX4-203ENST00000494546 POLR2DO15514 142 aaKnown RBP36.05■■■■□ 3.36
CBX4-203ENST00000494546 N4BP1O75113 896 aaKnown RBP36.05■■■■□ 3.36
CBX4-203ENST00000494546 ROR1Q01973 937 aa36.05■■■■□ 3.36
CBX4-203ENST00000494546 CTXN3Q4LDR2 81 aa36.05■■■■□ 3.36
CBX4-203ENST00000494546 SPATA1Q5VX52 437 aa36.05■■■■□ 3.36
CBX4-203ENST00000494546 SLC8B1Q6J4K2 584 aa36.05■■■■□ 3.36
CBX4-203ENST00000494546 PCDHB8Q9UN66 801 aa36.05■■■■□ 3.36
CBX4-203ENST00000494546 POLIQ9UNA4 740 aa36.05■■■■□ 3.36
CBX4-203ENST00000494546 TULP1O00294 542 aaPredicted RBP36.04■■■■□ 3.36
CBX4-203ENST00000494546 PRPF6O94906 941 aaKnown RBP36.04■■■■□ 3.36
CBX4-203ENST00000494546 ASIC1P78348 528 aa36.04■■■■□ 3.36
CBX4-203ENST00000494546 MRPL58Q14197 206 aaKnown RBP36.04■■■■□ 3.36
CBX4-203ENST00000494546 ASB7Q9H672 318 aa36.04■■■■□ 3.36
CBX4-203ENST00000494546 FBXL5Q9UKA1 691 aa36.04■■■■□ 3.36
CBX4-203ENST00000494546 RCOR1Q9UKL0 485 aa36.04■■■■□ 3.36
CBX4-203ENST00000494546 DERAQ9Y315 318 aa36.04■■■■□ 3.36
CBX4-203ENST00000494546 TECTAO75443 2155 aa36.03■■■■□ 3.36
CBX4-203ENST00000494546 HOXA9P31269 272 aa36.03■■■■□ 3.36
CBX4-203ENST00000494546 UVSSAQ2YD98 709 aa36.03■■■■□ 3.36
CBX4-203ENST00000494546 RESP18Q5W5W9 173 aa36.03■■■■□ 3.36
CBX4-203ENST00000494546 ZNF280DQ6N043 979 aa36.03■■■■□ 3.36
CBX4-203ENST00000494546 GET4Q7L5D6 327 aaPredicted RBP36.03■■■■□ 3.36
CBX4-203ENST00000494546 GRASPQ7Z6J2 395 aaPredicted RBP36.03■■■■□ 3.36
CBX4-203ENST00000494546 HPS3Q969F9 1004 aa36.03■■■■□ 3.36
CBX4-203ENST00000494546 PBXIP1Q96AQ6 731 aa36.03■■■■□ 3.36
CBX4-203ENST00000494546 SMOC2Q9H3U7 446 aa36.03■■■■□ 3.36
CBX4-203ENST00000494546 PPEF2O14830 753 aa36.02■■■■□ 3.36
CBX4-203ENST00000494546 TBC1D4O60343 1298 aa36.02■■■■□ 3.36
CBX4-203ENST00000494546 XYLBO75191 536 aa36.02■■■■□ 3.36
CBX4-203ENST00000494546 CRELD2Q6UXH1 353 aaPredicted RBP36.02■■■■□ 3.36
CBX4-203ENST00000494546 DSTYKQ6XUX3 929 aa36.02■■■■□ 3.36
CBX4-203ENST00000494546 UBALD2Q8IYN6 164 aa36.02■■■■□ 3.36
CBX4-203ENST00000494546 ZNF461Q8TAF7 563 aa36.02■■■■□ 3.36
CBX4-203ENST00000494546 MYADMQ96S97 322 aa36.02■■■■□ 3.36
CBX4-203ENST00000494546 FAM213AQ9BRX8 229 aa36.02■■■■□ 3.36
CBX4-203ENST00000494546 TIMM13Q9Y5L4 95 aaPredicted RBP36.02■■■■□ 3.36
CBX4-203ENST00000494546 WDR27A2RRH5 827 aa36.01■■■■□ 3.36
CBX4-203ENST00000494546 M0QZQ0 153 aa36.01■■■■□ 3.36
CBX4-203ENST00000494546 SAAL1Q96ER3 474 aa36.01■■■■□ 3.36
CBX4-203ENST00000494546 MFSD14AQ96MC6 490 aa36.01■■■■□ 3.36
CBX4-203ENST00000494546 TMEM206Q9H813 350 aa36.01■■■■□ 3.36
CBX4-203ENST00000494546 ZDHHC9Q9Y397 364 aa36.01■■■■□ 3.36
CBX4-203ENST00000494546 C2CD2Q9Y426 696 aa36.01■■■■□ 3.36
CBX4-203ENST00000494546 ELF1P32519 619 aa36■■■■□ 3.35
CBX4-203ENST00000494546 AARSP49588 968 aaKnown RBP eCLIP36■■■■□ 3.354e-6■■■■■ 30.6
CBX4-203ENST00000494546 NTHL1P78549 312 aa36■■■■□ 3.35
CBX4-203ENST00000494546 POU5F1Q01860 360 aaKnown RBP36■■■■□ 3.35
CBX4-203ENST00000494546 STXBP4Q6ZWJ1 553 aa36■■■■□ 3.35
CBX4-203ENST00000494546 GLIS3Q8NEA6 775 aa36■■■■□ 3.35
CBX4-203ENST00000494546 ZSWIM2Q8NEG5 633 aa36■■■■□ 3.35
CBX4-203ENST00000494546 MAGEF1Q9HAY2 307 aa36■■■■□ 3.35
CBX4-203ENST00000494546 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP35.99■■■■□ 3.35
CBX4-203ENST00000494546 ABLIM3O94929 683 aa35.99■■■■□ 3.35
CBX4-203ENST00000494546 FSHRP23945 695 aa35.99■■■■□ 3.35
CBX4-203ENST00000494546 YWHAHQ04917 246 aaPredicted RBP35.99■■■■□ 3.35
CBX4-203ENST00000494546 C9orf57Q5W0N0 161 aa35.99■■■■□ 3.35
CBX4-203ENST00000494546 BMP8AQ7Z5Y6 402 aa35.99■■■■□ 3.35
CBX4-203ENST00000494546 NOC3LQ8WTT2 800 aaKnown RBP35.99■■■■□ 3.35
CBX4-203ENST00000494546 ASIC4Q96FT7 647 aa35.99■■■■□ 3.35
CBX4-203ENST00000494546 CHAMP1Q96JM3 812 aa35.99■■■■□ 3.35
CBX4-203ENST00000494546 C7orf25Q9BPX7 421 aa35.99■■■■□ 3.35
CBX4-203ENST00000494546 KCNK12Q9HB15 430 aa35.99■■■■□ 3.35
CBX4-203ENST00000494546 MYO10Q9HD67 2058 aa35.99■■■■□ 3.35
CBX4-203ENST00000494546 GARTP22102 1010 aa35.98■■■■□ 3.35
CBX4-203ENST00000494546 RTL10Q7L3V2 364 aa35.98■■■■□ 3.35
CBX4-203ENST00000494546 USP37Q86T82 979 aa35.98■■■■□ 3.35
CBX4-203ENST00000494546 CBWD1Q9BRT8 395 aa35.98■■■■□ 3.35
CBX4-203ENST00000494546 PCIF1Q9H4Z3 704 aa35.98■■■■□ 3.35
CBX4-203ENST00000494546 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP35.98■■■■□ 3.352e-10■■■■□ 26.4
CBX4-203ENST00000494546 GOLGA8IPA6NC78 632 aa35.97■■■■□ 3.35
CBX4-203ENST00000494546 GOLGA8JA6NMD2 632 aa35.97■■■■□ 3.35
CBX4-203ENST00000494546 PRRG1O14668 218 aa35.97■■■■□ 3.35
CBX4-203ENST00000494546 IL18RAPO95256 599 aa35.97■■■■□ 3.35
CBX4-203ENST00000494546 CASP1P29466 404 aa35.97■■■■□ 3.35
CBX4-203ENST00000494546 LILRA4P59901 499 aa35.97■■■■□ 3.35
CBX4-203ENST00000494546 CNNM4Q6P4Q7 775 aa35.97■■■■□ 3.35
CBX4-203ENST00000494546 BLZF1Q9H2G9 400 aa35.97■■■■□ 3.35
CBX4-203ENST00000494546 CYP4F11Q9HBI6 524 aa35.97■■■■□ 3.35
CBX4-203ENST00000494546 DPP3Q9NY33 737 aa35.97■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms