RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 ATF2P15336 505 aa10.52□□□□□ -0.73
UBR4-216ENST00000494503 TRAPPC10P48553 1259 aa10.52□□□□□ -0.73
UBR4-216ENST00000494503 SMTNP53814 917 aa10.52□□□□□ -0.73
UBR4-216ENST00000494503 HMGN5P82970 282 aaKnown RBP10.52□□□□□ -0.73
UBR4-216ENST00000494503 MTAPQ13126 283 aa10.52□□□□□ -0.73
UBR4-216ENST00000494503 PPP2R5DQ14738 602 aa10.52□□□□□ -0.73
UBR4-216ENST00000494503 NOLC1Q14978 699 aaKnown RBP eCLIP10.52□□□□□ -0.73
UBR4-216ENST00000494503 ZNF528Q3MIS6 628 aa10.52□□□□□ -0.73
UBR4-216ENST00000494503 SLC8B1Q6J4K2 584 aa10.52□□□□□ -0.73
UBR4-216ENST00000494503 DTHD1Q6ZMT9 781 aa10.52□□□□□ -0.73
UBR4-216ENST00000494503 RTL10Q7L3V2 364 aa10.52□□□□□ -0.73
UBR4-216ENST00000494503 USP37Q86T82 979 aa10.52□□□□□ -0.73
UBR4-216ENST00000494503 HS6ST3Q8IZP7 471 aa10.52□□□□□ -0.73
UBR4-216ENST00000494503 APPL2Q8NEU8 664 aa10.52□□□□□ -0.73
UBR4-216ENST00000494503 FBXO18Q8NFZ0 1043 aa10.52□□□□□ -0.73
UBR4-216ENST00000494503 FAM200AQ8TCP9 573 aa10.52□□□□□ -0.73
UBR4-216ENST00000494503 CSGALNACT1Q8TDX6 532 aa10.52□□□□□ -0.73
UBR4-216ENST00000494503 ELSPBP1Q96BH3 223 aa10.52□□□□□ -0.73
UBR4-216ENST00000494503 FAM212AQ96EL1 285 aa10.52□□□□□ -0.73
UBR4-216ENST00000494503 ZBTB45Q96K62 511 aaPredicted RBP10.52□□□□□ -0.73
UBR4-216ENST00000494503 ZMAT2Q96NC0 199 aaKnown RBP10.52□□□□□ -0.73
UBR4-216ENST00000494503 TBC1D32Q96NH3 1257 aa10.52□□□□□ -0.73
UBR4-216ENST00000494503 LLPHQ9BRT6 129 aaKnown RBP10.52□□□□□ -0.73
UBR4-216ENST00000494503 DDX23Q9BUQ8 820 aaKnown RBP10.52□□□□□ -0.73
UBR4-216ENST00000494503 OSBPL6Q9BZF3 934 aa10.52□□□□□ -0.73
UBR4-216ENST00000494503 TUBGCP4Q9UGJ1 667 aa10.52□□□□□ -0.73
UBR4-216ENST00000494503 CDV3Q9UKY7 258 aaKnown RBP10.52□□□□□ -0.73
UBR4-216ENST00000494503 RBM19Q9Y4C8 960 aaKnown RBP10.52□□□□□ -0.73
UBR4-216ENST00000494503 TIMM13Q9Y5L4 95 aaPredicted RBP10.52□□□□□ -0.73
UBR4-216ENST00000494503 TPRP12270 2363 aaKnown RBP10.51□□□□□ -0.73
UBR4-216ENST00000494503 DNAH14Q0VDD8 3507 aa10.51□□□□□ -0.73
UBR4-216ENST00000494503 ARHGEF37A1IGU5 675 aa10.51□□□□□ -0.73
UBR4-216ENST00000494503 MAN2B1O00754 1011 aa10.51□□□□□ -0.73
UBR4-216ENST00000494503 ZNF263O14978 683 aa10.51□□□□□ -0.73
UBR4-216ENST00000494503 CXCL8P10145 99 aa10.51□□□□□ -0.73
UBR4-216ENST00000494503 PSMC3P17980 439 aa10.51□□□□□ -0.73
UBR4-216ENST00000494503 RPL9P32969 192 aaKnown RBP10.51□□□□□ -0.73
UBR4-216ENST00000494503 VIPR2P41587 438 aa10.51□□□□□ -0.73
UBR4-216ENST00000494503 KPNA1P52294 538 aaPredicted RBP10.51□□□□□ -0.73
UBR4-216ENST00000494503 CACNB1Q02641 598 aaPredicted RBP10.51□□□□□ -0.73
UBR4-216ENST00000494503 YWHAHQ04917 246 aaPredicted RBP10.51□□□□□ -0.73
UBR4-216ENST00000494503 TEAD2Q15562 447 aa10.51□□□□□ -0.73
UBR4-216ENST00000494503 RINT1Q6NUQ1 792 aa10.51□□□□□ -0.73
UBR4-216ENST00000494503 CD300LGQ6UXG3 332 aa10.51□□□□□ -0.73
UBR4-216ENST00000494503 DSTYKQ6XUX3 929 aa10.51□□□□□ -0.73
UBR4-216ENST00000494503 GPIHBP1Q8IV16 184 aa10.51□□□□□ -0.73
UBR4-216ENST00000494503 TCEAL8Q8IYN2 117 aa10.51□□□□□ -0.73
UBR4-216ENST00000494503 SUMF1Q8NBK3 374 aa10.51□□□□□ -0.73
UBR4-216ENST00000494503 RASSF8Q8NHQ8 419 aa10.51□□□□□ -0.73
UBR4-216ENST00000494503 ZSCAN18Q8TBC5 510 aaPredicted RBP10.51□□□□□ -0.73
UBR4-216ENST00000494503 FAM3CQ92520 227 aa10.51□□□□□ -0.73
UBR4-216ENST00000494503 DDX12PQ92771 950 aa10.51□□□□□ -0.73
UBR4-216ENST00000494503 DNASE1L2Q92874 299 aa10.51□□□□□ -0.73
UBR4-216ENST00000494503 IRF7Q92985 503 aa10.51□□□□□ -0.73
UBR4-216ENST00000494503 KIF12Q96FN5 646 aa10.51□□□□□ -0.73
UBR4-216ENST00000494503 TMEM134Q9H6X4 195 aa10.51□□□□□ -0.73
UBR4-216ENST00000494503 CNTN3Q9P232 1028 aa10.51□□□□□ -0.73
UBR4-216ENST00000494503 ARHGAP28Q9P2N2 729 aa10.51□□□□□ -0.73
UBR4-216ENST00000494503 PCDHB6Q9Y5E3 794 aa10.51□□□□□ -0.73
UBR4-216ENST00000494503 PIAS3Q9Y6X2 628 aa10.51□□□□□ -0.73
UBR4-216ENST00000494503 DPYSL4O14531 572 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 CLDN3O15551 220 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 TOM1L1O75674 476 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 ABLIM3O94929 683 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 OR4Q2P0C623 313 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 KCNE1P15382 129 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 CCR2P41597 374 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 CDR1P51861 262 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 PPP2R3AQ06190 1150 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 PDIA5Q14554 519 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 DHX8Q14562 1220 aaKnown RBP10.5□□□□□ -0.73
UBR4-216ENST00000494503 PRSS36Q5K4E3 855 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 TPGS2Q68CL5 300 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 RNF19BQ6ZMZ0 732 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 TAS1R3Q7RTX0 852 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 DAW1Q8N136 415 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 TMEM130Q8N3G9 435 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 TTC8Q8TAM2 541 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 SMARCD2Q92925 531 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 SUSD3Q96L08 255 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 ZSWIM3Q96MP5 696 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 ASB16Q96NS5 453 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 ZHX3Q9H4I2 956 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 LMAN1LQ9HAT1 526 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 PPP4R2Q9NY27 417 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 AFF4Q9UHB7 1163 aaKnown RBP10.5□□□□□ -0.73
UBR4-216ENST00000494503 PCDHB8Q9UN66 801 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 YIPF1Q9Y548 306 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 ANK1P16157 1881 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 TCHHQ07283 1943 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 SDK1Q7Z5N4 2213 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 CACNA1BQ00975 2339 aa10.5□□□□□ -0.73
UBR4-216ENST00000494503 ZNF638Q14966 1978 aaKnown RBP10.49□□□□□ -0.73
UBR4-216ENST00000494503 A0A1W2PRU2 124 aa10.49□□□□□ -0.73
UBR4-216ENST00000494503 VWA3AA6NCI4 1184 aa10.49□□□□□ -0.73
UBR4-216ENST00000494503 SLC38A8A6NNN8 435 aa10.49□□□□□ -0.73
UBR4-216ENST00000494503 SEC24BO95487 1268 aa10.49□□□□□ -0.73
UBR4-216ENST00000494503 KRT18P05783 430 aaKnown RBP10.49□□□□□ -0.73
UBR4-216ENST00000494503 PLS3P13797 630 aa10.49□□□□□ -0.73
UBR4-216ENST00000494503 FCARP24071 287 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms