RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 CUL2Q13617 745 aa22.14■■□□□ 1.14
KPNA1-210ENST00000494339 ENOSF1Q7L5Y1 443 aa22.14■■□□□ 1.14
KPNA1-210ENST00000494339 ANKLE1Q8NAG6 615 aa22.14■■□□□ 1.14
KPNA1-210ENST00000494339 RNF169Q8NCN4 708 aa22.14■■□□□ 1.14
KPNA1-210ENST00000494339 FAM81BQ96LP2 452 aa22.14■■□□□ 1.14
KPNA1-210ENST00000494339 ZFP42Q96MM3 310 aa22.14■■□□□ 1.14
KPNA1-210ENST00000494339 ITGA11Q9UKX5 1188 aa22.14■■□□□ 1.14
KPNA1-210ENST00000494339 AGAP1Q9UPQ3 857 aa22.14■■□□□ 1.14
KPNA1-210ENST00000494339 SSU72P8A0A1W2PR75 194 aa22.14■■□□□ 1.13
KPNA1-210ENST00000494339 NBNO60934 754 aa22.14■■□□□ 1.13
KPNA1-210ENST00000494339 PRKCIP41743 596 aa22.14■■□□□ 1.13
KPNA1-210ENST00000494339 ZBTB6Q15916 424 aa22.14■■□□□ 1.13
KPNA1-210ENST00000494339 XKR4Q5GH76 650 aa22.14■■□□□ 1.13
KPNA1-210ENST00000494339 ZNF571Q7Z3V5 609 aaPredicted RBP22.14■■□□□ 1.13
KPNA1-210ENST00000494339 TMEM106CQ9BVX2 250 aa22.14■■□□□ 1.13
KPNA1-210ENST00000494339 HIPK3Q9H422 1215 aa22.14■■□□□ 1.13
KPNA1-210ENST00000494339 ATP11BQ9Y2G3 1177 aa22.14■■□□□ 1.13
KPNA1-210ENST00000494339 R3HCC1Q9Y3T6 440 aaKnown RBP22.14■■□□□ 1.13
KPNA1-210ENST00000494339 BZW2Q9Y6E2 419 aaKnown RBP22.14■■□□□ 1.13
KPNA1-210ENST00000494339 A0A0U1RQF3 1178 aa22.13■■□□□ 1.13
KPNA1-210ENST00000494339 KRT5P13647 590 aa22.13■■□□□ 1.13
KPNA1-210ENST00000494339 MLH1P40692 756 aa22.13■■□□□ 1.13
KPNA1-210ENST00000494339 RAB27AP51159 221 aa22.13■■□□□ 1.13
KPNA1-210ENST00000494339 CYP27A1Q02318 531 aa22.13■■□□□ 1.13
KPNA1-210ENST00000494339 ASTE1Q2TB18 679 aaPredicted RBP22.13■■□□□ 1.13
KPNA1-210ENST00000494339 FMNL3Q8IVF7 1028 aa22.13■■□□□ 1.13
KPNA1-210ENST00000494339 FAM71AQ8IYT1 594 aa22.13■■□□□ 1.13
KPNA1-210ENST00000494339 BEST2Q8NFU1 509 aa22.13■■□□□ 1.13
KPNA1-210ENST00000494339 TOX2Q96NM4 488 aa22.13■■□□□ 1.13
KPNA1-210ENST00000494339 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.13■■□□□ 1.13
KPNA1-210ENST00000494339 TRAIPQ9BWF2 469 aa22.13■■□□□ 1.13
KPNA1-210ENST00000494339 PPP1R12CQ9BZL4 782 aa22.13■■□□□ 1.13
KPNA1-210ENST00000494339 C11orf49Q9H6J7 331 aa22.13■■□□□ 1.13
KPNA1-210ENST00000494339 NXF1Q9UBU9 619 aaKnown RBP22.13■■□□□ 1.13
KPNA1-210ENST00000494339 SCN1AP35498 2009 aa22.12■■□□□ 1.13
KPNA1-210ENST00000494339 CYP26A1O43174 497 aa22.12■■□□□ 1.13
KPNA1-210ENST00000494339 CCDC172P0C7W6 258 aa22.12■■□□□ 1.13
KPNA1-210ENST00000494339 KCNE1P15382 129 aa22.12■■□□□ 1.13
KPNA1-210ENST00000494339 TBXAS1P24557 533 aaPredicted RBP22.12■■□□□ 1.13
KPNA1-210ENST00000494339 RBP5P82980 135 aa22.12■■□□□ 1.13
KPNA1-210ENST00000494339 GFPT1Q06210 699 aaPredicted RBP22.12■■□□□ 1.13
KPNA1-210ENST00000494339 GPNMBQ14956 572 aa22.12■■□□□ 1.13
KPNA1-210ENST00000494339 C1orf53Q5VUE5 145 aa22.12■■□□□ 1.13
KPNA1-210ENST00000494339 GAD1Q99259 594 aa22.12■■□□□ 1.13
KPNA1-210ENST00000494339 NIF3L1Q9GZT8 377 aa22.12■■□□□ 1.13
KPNA1-210ENST00000494339 UBQLN1Q9UMX0 589 aaKnown RBP22.12■■□□□ 1.13
KPNA1-210ENST00000494339 REXO2Q9Y3B8 237 aaKnown RBP22.12■■□□□ 1.13
KPNA1-210ENST00000494339 TET1Q8NFU7 2136 aa22.12■■□□□ 1.13
KPNA1-210ENST00000494339 SCN5AQ14524 2016 aa22.12■■□□□ 1.13
KPNA1-210ENST00000494339 A0A0U1RQJ8 604 aa22.12■■□□□ 1.13
KPNA1-210ENST00000494339 EIF3CLB5ME19 914 aaKnown RBP22.12■■□□□ 1.13
KPNA1-210ENST00000494339 ZNF623O75123 536 aa22.12■■□□□ 1.13
KPNA1-210ENST00000494339 IPO7O95373 1038 aaKnown RBP22.12■■□□□ 1.13
KPNA1-210ENST00000494339 WDR72Q3MJ13 1102 aa22.12■■□□□ 1.13
KPNA1-210ENST00000494339 SCARA5Q6ZMJ2 495 aa22.12■■□□□ 1.13
KPNA1-210ENST00000494339 AGMOQ6ZNB7 445 aa22.12■■□□□ 1.13
KPNA1-210ENST00000494339 MRPL10Q7Z7H8 261 aaKnown RBP22.12■■□□□ 1.13
KPNA1-210ENST00000494339 ATRIPQ8WXE1 791 aa22.12■■□□□ 1.13
KPNA1-210ENST00000494339 SCLYQ96I15 445 aa22.12■■□□□ 1.13
KPNA1-210ENST00000494339 HPDLQ96IR7 371 aa22.12■■□□□ 1.13
KPNA1-210ENST00000494339 EIF3CQ99613 913 aaKnown RBP22.12■■□□□ 1.13
KPNA1-210ENST00000494339 ACP6Q9NPH0 428 aa22.12■■□□□ 1.13
KPNA1-210ENST00000494339 ADAMTS1Q9UHI8 967 aa22.12■■□□□ 1.13
KPNA1-210ENST00000494339 POLIQ9UNA4 740 aa22.12■■□□□ 1.13
KPNA1-210ENST00000494339 PTGESO14684 152 aa22.11■■□□□ 1.13
KPNA1-210ENST00000494339 ZNF263O14978 683 aa22.11■■□□□ 1.13
KPNA1-210ENST00000494339 ATF7P17544 494 aaPredicted RBP22.11■■□□□ 1.13
KPNA1-210ENST00000494339 AFF1P51825 1210 aaKnown RBP22.11■■□□□ 1.13
KPNA1-210ENST00000494339 CCL23P55773 120 aa22.11■■□□□ 1.13
KPNA1-210ENST00000494339 ZNF667Q5HYK9 610 aa22.11■■□□□ 1.13
KPNA1-210ENST00000494339 RTN4RL1Q86UN2 441 aaPredicted RBP22.11■■□□□ 1.13
KPNA1-210ENST00000494339 TAF4BQ92750 862 aa22.11■■□□□ 1.13
KPNA1-210ENST00000494339 PAXBP1Q9Y5B6 917 aa22.11■■□□□ 1.13
KPNA1-210ENST00000494339 PPEF2O14830 753 aa22.1■■□□□ 1.13
KPNA1-210ENST00000494339 ASPAP45381 313 aa22.1■■□□□ 1.13
KPNA1-210ENST00000494339 SOX4Q06945 474 aaPredicted RBP22.1■■□□□ 1.13
KPNA1-210ENST00000494339 SPA17Q15506 151 aa22.1■■□□□ 1.13
KPNA1-210ENST00000494339 SLC47A2Q86VL8 602 aa22.1■■□□□ 1.13
KPNA1-210ENST00000494339 LINC01599Q8WXQ3 324 aa22.1■■□□□ 1.13
KPNA1-210ENST00000494339 RPS6KC1Q96S38 1066 aa22.1■■□□□ 1.13
KPNA1-210ENST00000494339 MCOLN1Q9GZU1 580 aa22.1■■□□□ 1.13
KPNA1-210ENST00000494339 GOLGA2P5Q9HBQ8 144 aa22.1■■□□□ 1.13
KPNA1-210ENST00000494339 RGS18Q9NS28 235 aa22.1■■□□□ 1.13
KPNA1-210ENST00000494339 TANC1Q9C0D5 1861 aa22.1■■□□□ 1.13
KPNA1-210ENST00000494339 A0A087X0T9 212 aa22.1■■□□□ 1.13
KPNA1-210ENST00000494339 FAM228BP0C875 321 aa22.1■■□□□ 1.13
KPNA1-210ENST00000494339 ACO1P21399 889 aaKnown RBP22.1■■□□□ 1.13
KPNA1-210ENST00000494339 ATICP31939 592 aa22.1■■□□□ 1.13
KPNA1-210ENST00000494339 LRRC26Q2I0M4 334 aa22.1■■□□□ 1.13
KPNA1-210ENST00000494339 ECHDC2Q86YB7 292 aa22.1■■□□□ 1.13
KPNA1-210ENST00000494339 GSTCDQ8NEC7 633 aa22.1■■□□□ 1.13
KPNA1-210ENST00000494339 DBF4BQ8NFT6 615 aa22.1■■□□□ 1.13
KPNA1-210ENST00000494339 GIT1Q9Y2X7 761 aa22.1■■□□□ 1.13
KPNA1-210ENST00000494339 PCDHB4Q9Y5E5 795 aa22.1■■□□□ 1.13
KPNA1-210ENST00000494339 ARL5CA6NH57 179 aa22.09■■□□□ 1.13
KPNA1-210ENST00000494339 XPOTO43592 962 aaKnown RBP22.09■■□□□ 1.13
KPNA1-210ENST00000494339 WEE2P0C1S8 567 aa22.09■■□□□ 1.13
KPNA1-210ENST00000494339 SKIP12755 728 aa22.09■■□□□ 1.13
KPNA1-210ENST00000494339 CD58P19256 250 aa22.09■■□□□ 1.13
KPNA1-210ENST00000494339 CYP2C18P33260 490 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms