RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 ANO9A1A5B4 782 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 FSD2A1L4K1 749 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 TRIM49BA6NDI0 452 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 C2orf71A6NGG8 1288 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 EFEMP2O95967 443 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 NRIP1P48552 1158 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 PMS1P54277 932 aaKnown RBP13.47□□□□□ -0.25
TRA2A-209ENST00000494255 DSG1Q02413 1049 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 PTPN14Q15678 1187 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 PDXDC1Q6P996 788 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 RBM23Q86U06 439 aaKnown RBP13.47□□□□□ -0.25
TRA2A-209ENST00000494255 TMEM130Q8N3G9 435 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 CSGALNACT2Q8N6G5 542 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 TMC2Q8TDI7 906 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 RIN2Q8WYP3 895 aaPredicted RBP13.47□□□□□ -0.25
TRA2A-209ENST00000494255 SUSD3Q96L08 255 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 ZNF560Q96MR9 790 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 CDCA3Q99618 268 aaPredicted RBP13.47□□□□□ -0.25
TRA2A-209ENST00000494255 MKNK1Q9BUB5 465 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 EMILIN2Q9BXX0 1053 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 DACH1Q9UI36 760 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 IRAK3Q9Y616 596 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 HIDE1A8MVS5 230 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 PIRO00625 290 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 NCK2O43639 380 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 AKAP3O75969 853 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 ITGB3P05106 788 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 KRT19P08727 400 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 PNPLA4P41247 253 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 TAF6P49848 677 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 AP3M2P53677 418 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 RBP5P82980 135 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 CREMQ03060 361 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 FOXR2Q6PJQ5 311 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 CD300LGQ6UXG3 332 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 DSTYKQ6XUX3 929 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 INTS8Q75QN2 995 aaKnown RBP13.47□□□□□ -0.25
TRA2A-209ENST00000494255 ADGRD2Q7Z7M1 963 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 GPR65Q8IYL9 337 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 C1orf127Q8N9H9 656 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 OR5B17Q8NGF7 314 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 PARD3BQ8TEW8 1205 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 IGFLR1Q9H665 355 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.47□□□□□ -0.25
TRA2A-209ENST00000494255 CHST7Q9NS84 486 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 AGAP1Q9UPQ3 857 aa13.47□□□□□ -0.25
TRA2A-209ENST00000494255 ARHGEF37A1IGU5 675 aa13.46□□□□□ -0.26
TRA2A-209ENST00000494255 I3L4J1 428 aa13.46□□□□□ -0.26
TRA2A-209ENST00000494255 PPEF2O14830 753 aa13.46□□□□□ -0.26
TRA2A-209ENST00000494255 SYN3O14994 580 aa13.46□□□□□ -0.26
TRA2A-209ENST00000494255 SLC16A3O15427 465 aaKnown RBP13.46□□□□□ -0.26
TRA2A-209ENST00000494255 FGFR3P22607 806 aa13.46□□□□□ -0.26
TRA2A-209ENST00000494255 IGFBP6P24592 240 aaPredicted RBP13.46□□□□□ -0.26
TRA2A-209ENST00000494255 TKTP29401 623 aaKnown RBP13.46□□□□□ -0.26
TRA2A-209ENST00000494255 POLR2BP30876 1174 aaKnown RBP13.46□□□□□ -0.26
TRA2A-209ENST00000494255 VAMP7P51809 220 aa13.46□□□□□ -0.26
TRA2A-209ENST00000494255 STX17P56962 302 aa13.46□□□□□ -0.26
TRA2A-209ENST00000494255 NLRP12P59046 1061 aa13.46□□□□□ -0.26
TRA2A-209ENST00000494255 HYAL1Q12794 435 aa13.46□□□□□ -0.26
TRA2A-209ENST00000494255 DUSP6Q16828 381 aa13.46□□□□□ -0.26
TRA2A-209ENST00000494255 SV2CQ496J9 727 aa13.46□□□□□ -0.26
TRA2A-209ENST00000494255 KIAA0319Q5VV43 1072 aa13.46□□□□□ -0.26
TRA2A-209ENST00000494255 TTI2Q6NXR4 508 aa13.46□□□□□ -0.26
TRA2A-209ENST00000494255 EP400NLQ6ZTU2 488 aa13.46□□□□□ -0.26
TRA2A-209ENST00000494255 ZC3H3Q8IXZ2 948 aaKnown RBP13.46□□□□□ -0.26
TRA2A-209ENST00000494255 APPL2Q8NEU8 664 aa13.46□□□□□ -0.26
TRA2A-209ENST00000494255 PIK3R5Q8WYR1 880 aa13.46□□□□□ -0.26
TRA2A-209ENST00000494255 EEF2KMTQ96G04 330 aa13.46□□□□□ -0.26
TRA2A-209ENST00000494255 B3GALT6Q96L58 329 aa13.46□□□□□ -0.26
TRA2A-209ENST00000494255 POP1Q99575 1024 aaKnown RBP13.46□□□□□ -0.26
TRA2A-209ENST00000494255 PCDHB8Q9UN66 801 aa13.46□□□□□ -0.26
TRA2A-209ENST00000494255 PTPRJQ12913 1337 aa13.46□□□□□ -0.26
TRA2A-209ENST00000494255 MYO7AQ13402 2215 aa13.45□□□□□ -0.26
TRA2A-209ENST00000494255 LRRIQ3A6PVS8 624 aaPredicted RBP13.45□□□□□ -0.26
TRA2A-209ENST00000494255 PER2O15055 1255 aa13.45□□□□□ -0.26
TRA2A-209ENST00000494255 PHACTR2O75167 634 aa13.45□□□□□ -0.26
TRA2A-209ENST00000494255 FGFR1OPO95684 399 aaKnown RBP13.45□□□□□ -0.26
TRA2A-209ENST00000494255 ADH1AP07327 375 aa13.45□□□□□ -0.26
TRA2A-209ENST00000494255 KLRC2P26717 231 aa13.45□□□□□ -0.26
TRA2A-209ENST00000494255 LILRA4P59901 499 aa13.45□□□□□ -0.26
TRA2A-209ENST00000494255 ENPEPQ07075 957 aa13.45□□□□□ -0.26
TRA2A-209ENST00000494255 BFSP1Q12934 665 aa13.45□□□□□ -0.26
TRA2A-209ENST00000494255 PSMD5Q16401 504 aa13.45□□□□□ -0.26
TRA2A-209ENST00000494255 RTP2Q5QGT7 225 aa13.45□□□□□ -0.26
TRA2A-209ENST00000494255 SASS6Q6UVJ0 657 aa13.45□□□□□ -0.26
TRA2A-209ENST00000494255 RBM43Q6ZSC3 357 aaKnown RBP13.45□□□□□ -0.26
TRA2A-209ENST00000494255 ANKS3Q6ZW76 656 aa13.45□□□□□ -0.26
TRA2A-209ENST00000494255 TRAPPC11Q7Z392 1133 aa13.45□□□□□ -0.26
TRA2A-209ENST00000494255 LRRC52Q8N7C0 313 aa13.45□□□□□ -0.26
TRA2A-209ENST00000494255 EFHBQ8N7U6 833 aa13.45□□□□□ -0.26
TRA2A-209ENST00000494255 FAM84AQ96KN4 292 aa13.45□□□□□ -0.26
TRA2A-209ENST00000494255 CEP63Q96MT8 703 aa13.45□□□□□ -0.26
TRA2A-209ENST00000494255 RWDD2AQ9UIY3 292 aa13.45□□□□□ -0.26
TRA2A-209ENST00000494255 H7C4K7 107 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 M0QZQ0 153 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 IKBKBO14920 756 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 LILRB3O75022 631 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 SRGAP2BP0DMP2 458 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 ODC1P11926 461 aa13.44□□□□□ -0.26
TRA2A-209ENST00000494255 AARSP49588 968 aaKnown RBP eCLIP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms