RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 A0A087X0T9 212 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 FAM228BP0C875 321 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 BRD2P25440 801 aaKnown RBP12.31□□□□□ -0.44
COL25A1-204ENST00000494183 IL1RL1Q01638 556 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 HIF1AQ16665 826 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 RAPGEF5Q92565 580 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 TRIM55Q9BYV6 548 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 OSBPL8Q9BZF1 889 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 UBA6A0AVT1 1052 aaPredicted RBP12.31□□□□□ -0.44
COL25A1-204ENST00000494183 H3BRB1 525 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 PRRG1O14668 218 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 TADA3O75528 432 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 KCNJ1P48048 391 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 DEUP1Q05D60 604 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 NR1H3Q13133 447 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 MTM1Q13496 603 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 AMHR2Q16671 573 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 SV2CQ496J9 727 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 PCNX4Q63HM2 1172 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 RNF135Q8IUD6 432 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 ATXN7L3BQ96GX2 97 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 TUT1Q9H6E5 874 aaKnown RBP12.31□□□□□ -0.44
COL25A1-204ENST00000494183 TRPC7Q9HCX4 862 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 VCX3AQ9NNX9 186 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 C17orf102A2RUQ5 167 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 VTNP04004 478 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 SMTNL2Q2TAL5 461 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 DCAF4L1Q3SXM0 396 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 HABP4Q5JVS0 413 aaKnown RBP12.31□□□□□ -0.44
COL25A1-204ENST00000494183 TTI2Q6NXR4 508 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 COG1Q8WTW3 980 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 PABPC5Q96DU9 382 aaKnown RBP12.31□□□□□ -0.44
COL25A1-204ENST00000494183 TRIM51Q9BSJ1 452 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 ZFATQ9P243 1243 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 EPS15L1Q9UBC2 864 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 ADM5C9JUS6 153 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 VWA5AO00534 786 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 TMEM253P0C7T8 217 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 DSG3P32926 999 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 TAF6P49848 677 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 FRA10AC1Q70Z53 315 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 ZNF720Q7Z2F6 126 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 ANKMY2Q8IV38 441 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 C9orf72Q96LT7 481 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 P2RX7Q99572 595 aaKnown RBP12.31□□□□□ -0.44
COL25A1-204ENST00000494183 PPP2R3BQ9Y5P8 575 aa12.31□□□□□ -0.44
COL25A1-204ENST00000494183 CCDC78A2IDD5 438 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 CTIFO43310 598 aaKnown RBP12.3□□□□□ -0.44
COL25A1-204ENST00000494183 NAMPTP43490 491 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 COPS2P61201 443 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 LRRC14Q15048 493 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 C2CD6Q53TS8 623 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 MTMR12Q9C0I1 747 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 IRAK4Q9NWZ3 460 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 ZC3H4Q9UPT8 1303 aaKnown RBP12.3□□□□□ -0.44
COL25A1-204ENST00000494183 E5RI56 91 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 ANKRD65E5RJM6 399 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 MAPK13O15264 365 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 CYTH3O43739 400 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 RBP3P10745 1247 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 MX2P20592 715 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 FGFR4P22455 802 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 SOX10P56693 466 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 ZNF484Q5JVG2 852 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 CENPPQ6IPU0 288 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 SAMD3Q8N6K7 520 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 TTC8Q8TAM2 541 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 USP33Q8TEY7 942 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 POP1Q99575 1024 aaKnown RBP12.3□□□□□ -0.44
COL25A1-204ENST00000494183 FAM8A1Q9UBU6 413 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 NAGPAQ9UK23 515 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 UBQLN1Q9UMX0 589 aaKnown RBP12.3□□□□□ -0.44
COL25A1-204ENST00000494183 A0A1W2PQJ5 194 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 CST8O60676 142 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 YY1P25490 414 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 METTL7BQ6UX53 244 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 C4orf19Q8IY42 314 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 TTC30BQ8N4P2 665 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 SCFD1Q8WVM8 642 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 UBE2Q2Q8WVN8 375 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 DCTN4Q9UJW0 460 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 CXCL11O14625 94 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 SNX2O60749 519 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 AKAP3O75969 853 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 C1orf131Q8NDD1 294 aaKnown RBP12.3□□□□□ -0.44
COL25A1-204ENST00000494183 SLC7A14Q8TBB6 771 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 SEMA6BQ9H3T3 888 aa12.3□□□□□ -0.44
COL25A1-204ENST00000494183 RRP15Q9Y3B9 282 aaKnown RBP12.3□□□□□ -0.44
COL25A1-204ENST00000494183 VWDEQ8N2E2 1590 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 FAM86B1E9PN63 330 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 OPHN1O60890 802 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 FAM86B2P0C5J1 330 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 KITP10721 976 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 MUTP22033 750 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 PON1P27169 355 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 ORC1Q13415 861 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 CUL2Q13617 745 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 Q4G0T1 1027 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 CYP4A22Q5TCH4 519 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 GPC2Q8N158 579 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms