RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 DNAJC7Q99615 494 aa12.27□□□□□ -0.45
MCF2L-231ENST00000494043 XYLT2Q9H1B5 865 aa12.27□□□□□ -0.45
MCF2L-231ENST00000494043 APOBEC3GQ9HC16 384 aaKnown RBP12.27□□□□□ -0.45
MCF2L-231ENST00000494043 UBE2TQ9NPD8 197 aaPredicted RBP12.27□□□□□ -0.45
MCF2L-231ENST00000494043 NLRC4Q9NPP4 1024 aa12.27□□□□□ -0.45
MCF2L-231ENST00000494043 MIOSQ9NXC5 875 aa12.27□□□□□ -0.45
MCF2L-231ENST00000494043 PCDH10Q9P2E7 1040 aa12.27□□□□□ -0.45
MCF2L-231ENST00000494043 DNAJC12Q9UKB3 198 aa12.27□□□□□ -0.45
MCF2L-231ENST00000494043 LRFN2Q9ULH4 789 aa12.27□□□□□ -0.45
MCF2L-231ENST00000494043 AGAP1Q9UPQ3 857 aa12.27□□□□□ -0.45
MCF2L-231ENST00000494043 INPP5FQ9Y2H2 1132 aa12.27□□□□□ -0.45
MCF2L-231ENST00000494043 R3HCC1Q9Y3T6 440 aaKnown RBP12.27□□□□□ -0.45
MCF2L-231ENST00000494043 PCDHB7Q9Y5E2 793 aa12.27□□□□□ -0.45
MCF2L-231ENST00000494043 LTBP2Q14767 1821 aa12.27□□□□□ -0.45
MCF2L-231ENST00000494043 MICAL3Q7RTP6 2002 aa12.27□□□□□ -0.45
MCF2L-231ENST00000494043 ANO9A1A5B4 782 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 HOXA2O43364 376 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 EVI5O60447 810 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 BAIAP3O94812 1187 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 CLSTN1O94985 981 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 STAU1O95793 577 aaKnown RBP12.26□□□□□ -0.45
MCF2L-231ENST00000494043 ACRP10323 421 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 LRPAP1P30533 357 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 KRT9P35527 623 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 JAM2P57087 298 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 FPGSQ05932 587 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 RAPGEF1Q13905 1077 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 NOMO2Q5JPE7 1267 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 C9orf57Q5W0N0 161 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.26□□□□□ -0.45
MCF2L-231ENST00000494043 RRAGAQ7L523 313 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 ENOSF1Q7L5Y1 443 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 PPM1KQ8N3J5 372 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 LRRC52Q8N7C0 313 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 URGCPQ8TCY9 931 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 RSPH1Q8WYR4 309 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 TATDN2Q93075 761 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 ELMO3Q96BJ8 720 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 HPDLQ96IR7 371 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 FAM81BQ96LP2 452 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 SPAG5Q96R06 1193 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 PANX2Q96RD6 677 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 STK33Q9BYT3 514 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 NIF3L1Q9GZT8 377 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 VRTNQ9H8Y1 702 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 GOLGA2P5Q9HBQ8 144 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 ABHD10Q9NUJ1 306 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 MYO6Q9UM54 1294 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 NUB1Q9Y5A7 615 aa12.26□□□□□ -0.45
MCF2L-231ENST00000494043 TRIP11Q15643 1979 aa12.25□□□□□ -0.45
MCF2L-231ENST00000494043 LRRC53A6NM62 1247 aa12.25□□□□□ -0.45
MCF2L-231ENST00000494043 F8VZ95 297 aa12.25□□□□□ -0.45
MCF2L-231ENST00000494043 PIRO00625 290 aa12.25□□□□□ -0.45
MCF2L-231ENST00000494043 PPEF2O14830 753 aa12.25□□□□□ -0.45
MCF2L-231ENST00000494043 POMCP01189 267 aa12.25□□□□□ -0.45
MCF2L-231ENST00000494043 AMHP03971 560 aa12.25□□□□□ -0.45
MCF2L-231ENST00000494043 TBXAS1P24557 533 aaPredicted RBP12.25□□□□□ -0.45
MCF2L-231ENST00000494043 PNPLA4P41247 253 aa12.25□□□□□ -0.45
MCF2L-231ENST00000494043 MFAP3P55082 362 aa12.25□□□□□ -0.45
MCF2L-231ENST00000494043 MYO1EQ12965 1108 aa12.25□□□□□ -0.45
MCF2L-231ENST00000494043 TUSC3Q13454 348 aa12.25□□□□□ -0.45
MCF2L-231ENST00000494043 CUL2Q13617 745 aa12.25□□□□□ -0.45
MCF2L-231ENST00000494043 ZNF667Q5HYK9 610 aa12.25□□□□□ -0.45
MCF2L-231ENST00000494043 ABI1Q8IZP0 508 aa12.25□□□□□ -0.45
MCF2L-231ENST00000494043 TNS4Q8IZW8 715 aa12.25□□□□□ -0.45
MCF2L-231ENST00000494043 OR8K1Q8NGG5 319 aa12.25□□□□□ -0.45
MCF2L-231ENST00000494043 KAT5Q92993 513 aa12.25□□□□□ -0.45
MCF2L-231ENST00000494043 FAXDC2Q96IV6 333 aa12.25□□□□□ -0.45
MCF2L-231ENST00000494043 ZNF560Q96MR9 790 aa12.25□□□□□ -0.45
MCF2L-231ENST00000494043 KREMEN1Q96MU8 473 aa12.25□□□□□ -0.45
MCF2L-231ENST00000494043 CASD1Q96PB1 797 aa12.25□□□□□ -0.45
MCF2L-231ENST00000494043 NUCKS1Q9H1E3 243 aaKnown RBP12.25□□□□□ -0.45
MCF2L-231ENST00000494043 KANSL3Q9P2N6 904 aa12.25□□□□□ -0.45
MCF2L-231ENST00000494043 ZMYND8Q9ULU4 1186 aaPredicted RBP12.25□□□□□ -0.45
MCF2L-231ENST00000494043 TTC3P53804 2025 aa12.25□□□□□ -0.45
MCF2L-231ENST00000494043 PODXLO00592 558 aa12.24□□□□□ -0.45
MCF2L-231ENST00000494043 SYN1P17600 705 aa12.24□□□□□ -0.45
MCF2L-231ENST00000494043 FECHP22830 423 aa12.24□□□□□ -0.45
MCF2L-231ENST00000494043 HNRNPH3P31942 346 aaKnown RBP12.24□□□□□ -0.45
MCF2L-231ENST00000494043 RPL9P32969 192 aaKnown RBP12.24□□□□□ -0.45
MCF2L-231ENST00000494043 ASPAP45381 313 aa12.24□□□□□ -0.45
MCF2L-231ENST00000494043 GATMP50440 423 aa12.24□□□□□ -0.45
MCF2L-231ENST00000494043 WDR5P61964 334 aaKnown RBP12.24□□□□□ -0.45
MCF2L-231ENST00000494043 DRAP1Q14919 205 aaPredicted RBP12.24□□□□□ -0.45
MCF2L-231ENST00000494043 ARHGAP44Q17R89 818 aa12.24□□□□□ -0.45
MCF2L-231ENST00000494043 E4F1Q66K89 784 aaPredicted RBP12.24□□□□□ -0.45
MCF2L-231ENST00000494043 C16orf59Q7L2K0 433 aa12.24□□□□□ -0.45
MCF2L-231ENST00000494043 LRRC8AQ8IWT6 810 aa12.24□□□□□ -0.45
MCF2L-231ENST00000494043 SHC3Q92529 594 aa12.24□□□□□ -0.45
MCF2L-231ENST00000494043 SYN2Q92777 582 aaPredicted RBP12.24□□□□□ -0.45
MCF2L-231ENST00000494043 JAKMIP2Q96AA8 810 aa12.24□□□□□ -0.45
MCF2L-231ENST00000494043 UROC1Q96N76 676 aa12.24□□□□□ -0.45
MCF2L-231ENST00000494043 ARID3AQ99856 593 aa12.24□□□□□ -0.45
MCF2L-231ENST00000494043 MRPL9Q9BYD2 267 aaKnown RBP12.24□□□□□ -0.45
MCF2L-231ENST00000494043 BCO2Q9BYV7 579 aa12.24□□□□□ -0.45
MCF2L-231ENST00000494043 GPR88Q9GZN0 384 aa12.24□□□□□ -0.45
MCF2L-231ENST00000494043 TBC1D13Q9NVG8 400 aa12.24□□□□□ -0.45
MCF2L-231ENST00000494043 POLIQ9UNA4 740 aa12.24□□□□□ -0.45
MCF2L-231ENST00000494043 CASTOR2A6NHX0 329 aa12.23□□□□□ -0.45
MCF2L-231ENST00000494043 FGBP02675 491 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms