RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 MAP3K19Q56UN5 1328 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 TRPC5OSA6NMA1 111 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 A8MXQ7 604 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 CHL1O00533 1208 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 NCK2O43639 380 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 FTLP02792 175 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-221ENST00000493795 CHN1P15882 459 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 MZF1P28698 734 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-221ENST00000493795 CCT8P50990 548 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 VAMP7P51809 220 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 VSNL1P62760 191 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 KBTBD12Q3ZCT8 623 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 CYP4Z2PQ8N1L4 340 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 UXS1Q8NBZ7 420 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 ZNF560Q96MR9 790 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 IL1RL2Q9HB29 575 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 TUFT1Q9NNX1 390 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 KLHL3Q9UH77 587 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 GGT7Q9UJ14 662 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 RCOR1Q9UKL0 485 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 V9GYQ6 96 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 SMIM31A0A1B0GVY4 71 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 ESYT3A0FGR9 886 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 SFI1A8K8P3 1242 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 ZMYM1Q5SVZ6 1142 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 ZNF618Q5T7W0 954 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 KDELC2Q7Z4H8 507 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 PRPF39Q86UA1 669 aaKnown RBP8.23□□□□□ -1.09
BRCA1-221ENST00000493795 KRT73Q86Y46 540 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 RCOR2Q8IZ40 523 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 ATPAF2Q8N5M1 289 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 ATL2Q8NHH9 583 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 VMP1Q96GC9 406 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 SGSM3Q96HU1 749 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 NARS2Q96I59 477 aaKnown RBP8.23□□□□□ -1.09
BRCA1-221ENST00000493795 EPC1Q9H2F5 836 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 DLGAP2Q9P1A6 1054 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 SPASTQ9UBP0 616 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 HERC5Q9UII4 1024 aaKnown RBP8.23□□□□□ -1.09
BRCA1-221ENST00000493795 EIF3LQ9Y262 564 aaKnown RBP8.23□□□□□ -1.09
BRCA1-221ENST00000493795 CDY2AQ9Y6F7 541 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 CDY1Q9Y6F8 540 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 SH2B2O14492 632 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-221ENST00000493795 CNOT3O75175 753 aaKnown RBP8.23□□□□□ -1.09
BRCA1-221ENST00000493795 PCCAP05165 728 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-221ENST00000493795 LCP1P13796 627 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 PSMC3P17980 439 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 ARMC4Q5T2S8 1044 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 PTRHD1Q6GMV3 140 aaKnown RBP8.23□□□□□ -1.09
BRCA1-221ENST00000493795 TMC4Q7Z404 712 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 CENPLQ8N0S6 344 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-221ENST00000493795 RMND5AQ9H871 391 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 CHMP2BQ9UQN3 213 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 B2RBV5 119 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 ATP6V1B1P15313 513 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 CHI3L1P36222 383 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-221ENST00000493795 DMPKQ09013 629 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 C1DQ13901 141 aaKnown RBP8.22□□□□□ -1.09
BRCA1-221ENST00000493795 KPNB1Q14974 876 aaKnown RBP8.22□□□□□ -1.09
BRCA1-221ENST00000493795 C11orf96Q7Z7L8 435 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 LCORLQ8N3X6 602 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 PCMTD2Q9NV79 361 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 NMRK1Q9NWW6 199 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 FHOD1Q9Y613 1164 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 ERVV-2B6SEH9 535 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 SPRP35270 261 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-221ENST00000493795 ZNF200P98182 395 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-221ENST00000493795 CACHD1Q5VU97 1274 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 SSH3Q8TE77 659 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 FAM217BQ9NTX9 383 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-221ENST00000493795 SMARCAL1Q9NZC9 954 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 SH3GLB1Q9Y371 365 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 UHRF1BP1Q6BDS2 1440 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 PPP1R37O75864 691 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 CIAO1O76071 339 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 MFN2O95140 757 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 ATP6V1C1P21283 382 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 AKAP5P24588 427 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 CDC25AP30304 524 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 HOXA13P31271 388 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-221ENST00000493795 MTMR1Q13613 665 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 GSTA3Q16772 222 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 TTC39BQ5VTQ0 682 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-221ENST00000493795 PADI6Q6TGC4 694 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 LRRC8DQ7L1W4 858 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 UNC45BQ8IWX7 931 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 C1orf131Q8NDD1 294 aaKnown RBP8.22□□□□□ -1.09
BRCA1-221ENST00000493795 RAD54LQ92698 747 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 CNPY3Q9BT09 278 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 MRPL4Q9BYD3 311 aaKnown RBP8.22□□□□□ -1.09
BRCA1-221ENST00000493795 VTA1Q9NP79 307 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 PCDHB6Q9Y5E3 794 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 EIF2AK4Q9P2K8 1649 aaKnown RBP8.22□□□□□ -1.09
BRCA1-221ENST00000493795 DYRK3O43781 588 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 PDE9AO76083 593 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 PIK3R1P27986 724 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 KCNH2Q12809 1159 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 PKP1Q13835 747 aa8.22□□□□□ -1.09
BRCA1-221ENST00000493795 DRAP1Q14919 205 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-221ENST00000493795 KYNUQ16719 465 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms