RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 ZNF197O14709 1029 aa18.99■□□□□ 0.63
COL9A1-210ENST00000493682 MICAL2O94851 1124 aa18.99■□□□□ 0.63
COL9A1-210ENST00000493682 GUCY2CP25092 1073 aa18.99■□□□□ 0.63
COL9A1-210ENST00000493682 MCM4P33991 863 aa18.99■□□□□ 0.63
COL9A1-210ENST00000493682 CCR2P41597 374 aa18.99■□□□□ 0.63
COL9A1-210ENST00000493682 SLC10A6Q3KNW5 377 aa18.99■□□□□ 0.63
COL9A1-210ENST00000493682 SEZ6Q53EL9 994 aa18.99■□□□□ 0.63
COL9A1-210ENST00000493682 FAM78AQ5JUQ0 283 aa18.99■□□□□ 0.63
COL9A1-210ENST00000493682 TPGS2Q68CL5 300 aa18.99■□□□□ 0.63
COL9A1-210ENST00000493682 DTHD1Q6ZMT9 781 aa18.99■□□□□ 0.63
COL9A1-210ENST00000493682 TBC1D32Q96NH3 1257 aa18.99■□□□□ 0.63
COL9A1-210ENST00000493682 TIPINQ9BVW5 301 aa18.99■□□□□ 0.63
COL9A1-210ENST00000493682 ANKFY1Q9P2R3 1169 aa18.99■□□□□ 0.63
COL9A1-210ENST00000493682 PATJQ8NI35 1801 aa18.99■□□□□ 0.63
COL9A1-210ENST00000493682 NRG2O14511 850 aaPredicted RBP18.98■□□□□ 0.63
COL9A1-210ENST00000493682 NCAM2O15394 837 aa18.98■□□□□ 0.63
COL9A1-210ENST00000493682 TOM1L1O75674 476 aa18.98■□□□□ 0.63
COL9A1-210ENST00000493682 RPS9P46781 194 aaKnown RBP18.98■□□□□ 0.63
COL9A1-210ENST00000493682 RAD51AP2Q09MP3 1159 aa18.98■□□□□ 0.63
COL9A1-210ENST00000493682 STRN3Q13033 797 aa18.98■□□□□ 0.63
COL9A1-210ENST00000493682 FZD5Q13467 585 aa18.98■□□□□ 0.63
COL9A1-210ENST00000493682 GRM2Q14416 872 aa18.98■□□□□ 0.63
COL9A1-210ENST00000493682 NOLC1Q14978 699 aaKnown RBP eCLIP18.98■□□□□ 0.63
COL9A1-210ENST00000493682 PDZD4Q76G19 769 aaPredicted RBP18.98■□□□□ 0.63
COL9A1-210ENST00000493682 TMEM161BQ8NDZ6 487 aa18.98■□□□□ 0.63
COL9A1-210ENST00000493682 APPL2Q8NEU8 664 aa18.98■□□□□ 0.63
COL9A1-210ENST00000493682 SPIRE2Q8WWL2 714 aa18.98■□□□□ 0.63
COL9A1-210ENST00000493682 DDX12PQ92771 950 aa18.98■□□□□ 0.63
COL9A1-210ENST00000493682 DNASE1L2Q92874 299 aa18.98■□□□□ 0.63
COL9A1-210ENST00000493682 BORCS6Q96GS4 357 aa18.98■□□□□ 0.63
COL9A1-210ENST00000493682 KIF2CQ99661 725 aa18.98■□□□□ 0.63
COL9A1-210ENST00000493682 ZFP14Q9HCL3 533 aa18.98■□□□□ 0.63
COL9A1-210ENST00000493682 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.98■□□□□ 0.63
COL9A1-210ENST00000493682 AFF4Q9UHB7 1163 aaKnown RBP18.98■□□□□ 0.63
COL9A1-210ENST00000493682 MRPS17Q9Y2R5 130 aaKnown RBP18.98■□□□□ 0.63
COL9A1-210ENST00000493682 PCDHGA2Q9Y5H1 932 aa18.98■□□□□ 0.63
COL9A1-210ENST00000493682 OTOGLQ3ZCN5 2332 aa18.97■□□□□ 0.63
COL9A1-210ENST00000493682 SPTLC1O15269 473 aa18.97■□□□□ 0.63
COL9A1-210ENST00000493682 MAPTP10636 758 aaKnown RBP18.97■□□□□ 0.63
COL9A1-210ENST00000493682 PLS3P13797 630 aa18.97■□□□□ 0.63
COL9A1-210ENST00000493682 ADCY1Q08828 1119 aa18.97■□□□□ 0.63
COL9A1-210ENST00000493682 ZRSR1Q15695 479 aaKnown RBP18.97■□□□□ 0.63
COL9A1-210ENST00000493682 CYP4A22Q5TCH4 519 aa18.97■□□□□ 0.63
COL9A1-210ENST00000493682 ZNF280DQ6N043 979 aa18.97■□□□□ 0.63
COL9A1-210ENST00000493682 HS6ST3Q8IZP7 471 aa18.97■□□□□ 0.63
COL9A1-210ENST00000493682 ATRIPQ8WXE1 791 aa18.97■□□□□ 0.63
COL9A1-210ENST00000493682 ZSWIM3Q96MP5 696 aa18.97■□□□□ 0.63
COL9A1-210ENST00000493682 ASB16Q96NS5 453 aa18.97■□□□□ 0.63
COL9A1-210ENST00000493682 BRD9Q9H8M2 597 aa18.97■□□□□ 0.63
COL9A1-210ENST00000493682 CEP72Q9P209 647 aa18.97■□□□□ 0.63
COL9A1-210ENST00000493682 TUBGCP4Q9UGJ1 667 aa18.97■□□□□ 0.63
COL9A1-210ENST00000493682 MAFFQ9ULX9 164 aa18.97■□□□□ 0.63
COL9A1-210ENST00000493682 PCDHB8Q9UN66 801 aa18.97■□□□□ 0.63
COL9A1-210ENST00000493682 CACNA1AO00555 2505 aa18.96■□□□□ 0.63
COL9A1-210ENST00000493682 SMTNP53814 917 aa18.96■□□□□ 0.63
COL9A1-210ENST00000493682 TWF1Q12792 350 aa18.96■□□□□ 0.63
COL9A1-210ENST00000493682 HYIQ5T013 277 aa18.96■□□□□ 0.63
COL9A1-210ENST00000493682 IQCEQ6IPM2 695 aa18.96■□□□□ 0.63
COL9A1-210ENST00000493682 ZPBP2Q6X784 338 aa18.96■□□□□ 0.63
COL9A1-210ENST00000493682 DGLUCYQ7Z3D6 616 aa18.96■□□□□ 0.63
COL9A1-210ENST00000493682 ELMOD1Q8N336 334 aa18.96■□□□□ 0.63
COL9A1-210ENST00000493682 TMEM130Q8N3G9 435 aa18.96■□□□□ 0.63
COL9A1-210ENST00000493682 ZBTB44Q8NCP5 570 aa18.96■□□□□ 0.63
COL9A1-210ENST00000493682 NELL1Q92832 810 aa18.96■□□□□ 0.63
COL9A1-210ENST00000493682 ZNF512Q96ME7 567 aaPredicted RBP18.96■□□□□ 0.63
COL9A1-210ENST00000493682 PNMA5Q96PV4 448 aa18.96■□□□□ 0.63
COL9A1-210ENST00000493682 TRMT61BQ9BVS5 477 aaKnown RBP18.96■□□□□ 0.63
COL9A1-210ENST00000493682 ZSCAN32Q9NX65 697 aa18.96■□□□□ 0.63
COL9A1-210ENST00000493682 KCNG1Q9UIX4 513 aa18.96■□□□□ 0.63
COL9A1-210ENST00000493682 CITO14578 2027 aa18.96■□□□□ 0.63
COL9A1-210ENST00000493682 CLDN3O15551 220 aa18.95■□□□□ 0.62
COL9A1-210ENST00000493682 MOSPD3O75425 235 aa18.95■□□□□ 0.62
COL9A1-210ENST00000493682 CXCL8P10145 99 aa18.95■□□□□ 0.62
COL9A1-210ENST00000493682 MARCKSP29966 332 aaPredicted RBP18.95■□□□□ 0.62
COL9A1-210ENST00000493682 SPAG1Q07617 926 aa18.95■□□□□ 0.62
COL9A1-210ENST00000493682 MCL1Q07820 350 aa18.95■□□□□ 0.62
COL9A1-210ENST00000493682 TSSK4Q6SA08 328 aa18.95■□□□□ 0.62
COL9A1-210ENST00000493682 VITQ6UXI7 678 aa18.95■□□□□ 0.62
COL9A1-210ENST00000493682 RNF19BQ6ZMZ0 732 aa18.95■□□□□ 0.62
COL9A1-210ENST00000493682 MAP4K3Q8IVH8 894 aa18.95■□□□□ 0.62
COL9A1-210ENST00000493682 ZNF687Q8N1G0 1237 aa18.95■□□□□ 0.62
COL9A1-210ENST00000493682 SYT2Q8N9I0 419 aaPredicted RBP18.95■□□□□ 0.62
COL9A1-210ENST00000493682 SMARCD2Q92925 531 aa18.95■□□□□ 0.62
COL9A1-210ENST00000493682 PLIN2Q99541 437 aa18.95■□□□□ 0.62
COL9A1-210ENST00000493682 HAPLN2Q9GZV7 340 aa18.95■□□□□ 0.62
COL9A1-210ENST00000493682 PLEKHA5Q9HAU0 1116 aa18.95■□□□□ 0.62
COL9A1-210ENST00000493682 PRMT8Q9NR22 394 aaPredicted RBP18.95■□□□□ 0.62
COL9A1-210ENST00000493682 MED19A0JLT2 244 aaPredicted RBP18.94■□□□□ 0.62
COL9A1-210ENST00000493682 M0QZQ0 153 aa18.94■□□□□ 0.62
COL9A1-210ENST00000493682 MAN2B1O00754 1011 aa18.94■□□□□ 0.62
COL9A1-210ENST00000493682 LILRB5O75023 590 aa18.94■□□□□ 0.62
COL9A1-210ENST00000493682 OAZ2O95190 189 aa18.94■□□□□ 0.62
COL9A1-210ENST00000493682 MYL4P12829 197 aa18.94■□□□□ 0.62
COL9A1-210ENST00000493682 CPB1P15086 417 aa18.94■□□□□ 0.62
COL9A1-210ENST00000493682 GJA1P17302 382 aa18.94■□□□□ 0.62
COL9A1-210ENST00000493682 EPHA5P54756 1037 aa18.94■□□□□ 0.62
COL9A1-210ENST00000493682 SLC12A3P55017 1021 aa18.94■□□□□ 0.62
COL9A1-210ENST00000493682 ATP2C1P98194 919 aaPredicted RBP18.94■□□□□ 0.62
COL9A1-210ENST00000493682 MTAPQ13126 283 aa18.94■□□□□ 0.62
COL9A1-210ENST00000493682 PUM1Q14671 1186 aaKnown RBP eCLIP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms