RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 IL2RBP14784 551 aa4.43□□□□□ -1.7
PTCD3-218ENST00000493430 ID4P47928 161 aa4.43□□□□□ -1.7
PTCD3-218ENST00000493430 PER3P56645 1201 aa4.43□□□□□ -1.7
PTCD3-218ENST00000493430 CCT2P78371 535 aaKnown RBP4.43□□□□□ -1.7
PTCD3-218ENST00000493430 B3GNTL1Q67FW5 361 aaPredicted RBP4.43□□□□□ -1.7
PTCD3-218ENST00000493430 GPR149Q86SP6 731 aa4.43□□□□□ -1.7
PTCD3-218ENST00000493430 JAZF1Q86VZ6 243 aa4.43□□□□□ -1.7
PTCD3-218ENST00000493430 BOLLQ8N9W6 283 aaKnown RBP4.43□□□□□ -1.7
PTCD3-218ENST00000493430 FUBP3Q96I24 572 aaKnown RBP eCLIP4.43□□□□□ -1.7
PTCD3-218ENST00000493430 Q96MF0 132 aa4.43□□□□□ -1.7
PTCD3-218ENST00000493430 RNPEPQ9H4A4 650 aa4.43□□□□□ -1.7
PTCD3-218ENST00000493430 TLK1Q9UKI8 766 aa4.43□□□□□ -1.7
PTCD3-218ENST00000493430 MBD5Q9P267 1494 aa4.43□□□□□ -1.7
PTCD3-218ENST00000493430 MLH3Q9UHC1 1453 aa4.43□□□□□ -1.7
PTCD3-218ENST00000493430 GOLGA8AA7E2F4 631 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 SYNMO15061 1565 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 POMCP01189 267 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 ATP5JP18859 108 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 PTH2RP49190 550 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 SCAPQ12770 1279 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 UBXN2BQ14CS0 331 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 ADRM1Q16186 407 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 SPHKAPQ2M3C7 1700 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 MUM1L1Q5H9M0 696 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 AFMIDQ63HM1 303 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 FAM43AQ8N2R8 423 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 PQLC1Q8N2U9 271 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 FBXO18Q8NFZ0 1043 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 TSPEARQ8WU66 669 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 FUBP1Q96AE4 644 aaKnown RBP4.42□□□□□ -1.7
PTCD3-218ENST00000493430 RNF31Q96EP0 1072 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 BOD1Q96IK1 185 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 DUSP26Q9BV47 211 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 SPATA5L1Q9BVQ7 753 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 GREM2Q9H772 168 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 IFT122Q9HBG6 1241 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 GALNT9Q9HCQ5 603 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 RBM12Q9NTZ6 932 aaKnown RBP4.42□□□□□ -1.7
PTCD3-218ENST00000493430 TMEM74BQ9NUR3 256 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 TBCCD1Q9NVR7 557 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 UGGT1Q9NYU2 1555 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 FAM30AQ9NZY2 134 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 APOBEC2Q9Y235 224 aaKnown RBP4.42□□□□□ -1.7
PTCD3-218ENST00000493430 A2MP01023 1474 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 MAGI2Q86UL8 1455 aa4.42□□□□□ -1.7
PTCD3-218ENST00000493430 AGLP35573 1532 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 CCNB3Q8WWL7 1395 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 SETD1AO15047 1707 aaKnown RBP4.41□□□□□ -1.7
PTCD3-218ENST00000493430 ENPP3O14638 875 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 C1RP00736 705 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 RAP2AP10114 183 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 CDK4P11802 303 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 SREBF1P36956 1147 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 GYS2P54840 703 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 CXADRP78310 365 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 OCA2Q04671 838 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 STRN3Q13033 797 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 ZNF169Q14929 603 aaPredicted RBP4.41□□□□□ -1.7
PTCD3-218ENST00000493430 MUM1Q2TAK8 710 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 ANO4Q32M45 955 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 LRCH2Q5VUJ6 765 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 FOXR2Q6PJQ5 311 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 Q6ZNX1 250 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 RNF180Q86T96 592 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 FAM98AQ8NCA5 519 aaKnown RBP4.41□□□□□ -1.7
PTCD3-218ENST00000493430 TGFBRAP1Q8WUH2 860 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 LMBR1Q8WVP7 490 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 STON2Q8WXE9 905 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 ZSWIM1Q9BR11 485 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 LRFN3Q9BTN0 628 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 ACE2Q9BYF1 805 aaPredicted RBP4.41□□□□□ -1.7
PTCD3-218ENST00000493430 SENP6Q9GZR1 1112 aaPredicted RBP4.41□□□□□ -1.7
PTCD3-218ENST00000493430 QRSL1Q9H0R6 528 aaKnown RBP4.41□□□□□ -1.7
PTCD3-218ENST00000493430 KIAA1586Q9HCI6 787 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 ALG13Q9NP73 1137 aaKnown RBP4.41□□□□□ -1.7
PTCD3-218ENST00000493430 CASS4Q9NQ75 786 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 LANCL2Q9NS86 450 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 ZBTB21Q9ULJ3 1066 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 LTBP4Q8N2S1 1624 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 CCDC141Q6ZP82 1450 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 SALL3Q9BXA9 1300 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 ABCC3O15438 1527 aa4.41□□□□□ -1.7
PTCD3-218ENST00000493430 COL11A2P13942 1736 aaPredicted RBP4.41□□□□□ -1.7
PTCD3-218ENST00000493430 PHLDB1Q86UU1 1377 aa4.4□□□□□ -1.7
PTCD3-218ENST00000493430 ALKQ9UM73 1620 aa4.4□□□□□ -1.7
PTCD3-218ENST00000493430 WNT10BO00744 389 aa4.4□□□□□ -1.71
PTCD3-218ENST00000493430 GPANK1O95872 356 aa4.4□□□□□ -1.71
PTCD3-218ENST00000493430 GCSHP23434 173 aa4.4□□□□□ -1.71
PTCD3-218ENST00000493430 GUCY1A2P33402 732 aa4.4□□□□□ -1.71
PTCD3-218ENST00000493430 RARRES1P49788 294 aa4.4□□□□□ -1.71
PTCD3-218ENST00000493430 EFCAB2Q5VUJ9 269 aa4.4□□□□□ -1.71
PTCD3-218ENST00000493430 OTUD7BQ6GQQ9 843 aa4.4□□□□□ -1.71
PTCD3-218ENST00000493430 TMEM140Q9NV12 185 aa4.4□□□□□ -1.71
PTCD3-218ENST00000493430 LRIT1Q9P2V4 623 aa4.4□□□□□ -1.71
PTCD3-218ENST00000493430 SCOCQ9UIL1 159 aa4.4□□□□□ -1.71
PTCD3-218ENST00000493430 KDM5DQ9BY66 1539 aa4.4□□□□□ -1.71
PTCD3-218ENST00000493430 RGPD8O14715 1765 aaPredicted RBP4.4□□□□□ -1.71
PTCD3-218ENST00000493430 UNC13BO14795 1591 aa4.4□□□□□ -1.71
PTCD3-218ENST00000493430 KIF1BO60333 1816 aa4.39□□□□□ -1.71
PTCD3-218ENST00000493430 TET3O43151 1660 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms