RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 WDR44Q5JSH3 913 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 MIIPQ5JXC2 388 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 TDRD10Q5VZ19 366 aaKnown RBP12.45□□□□□ -0.42
LSM2-214ENST00000493387 KCNT2Q6UVM3 1135 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 GBP6Q6ZN66 633 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 FBXL13Q8NEE6 735 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 FAXDC2Q96IV6 333 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 PLVAPQ9BX97 442 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 VPS16Q9H269 839 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 MMRN2Q9H8L6 949 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 AGAP1Q9UPQ3 857 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 ANK1P16157 1881 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 GRXCR1A8MXD5 290 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 NRP1O14786 923 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 CBFA2T2O43439 604 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 TADA2AO75478 443 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 B3GAT3O94766 335 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 HLA-DRAP01903 254 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 RB1P06400 928 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 P4HA1P13674 534 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 SLC11A1P49279 550 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 TAF6P49848 677 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 CLCNKBP51801 687 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 GUCY2FP51841 1108 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 UBASH3AP57075 661 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 LRIT3Q3SXY7 679 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 SV2CQ496J9 727 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 CBWD6Q4V339 395 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 CBWD3Q5JTY5 395 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 CBWD5Q5RIA9 395 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 FAM109BQ6ICB4 259 aaPredicted RBP12.44□□□□□ -0.42
LSM2-214ENST00000493387 COLGALT1Q8NBJ5 622 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 HPDLQ96IR7 371 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 VRTNQ9H8Y1 702 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 GOLGA2P5Q9HBQ8 144 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 RAB20Q9NX57 234 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 SPG21Q9NZD8 308 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 DNAJB4Q9UDY4 337 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 SIX4Q9UIU6 781 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 NUB1Q9Y5A7 615 aa12.44□□□□□ -0.42
LSM2-214ENST00000493387 TDRD15B5MCY1 1934 aaKnown RBP12.43□□□□□ -0.42
LSM2-214ENST00000493387 PDCD11Q14690 1871 aaKnown RBP12.43□□□□□ -0.42
LSM2-214ENST00000493387 A0A1B0GTH6 734 aa12.43□□□□□ -0.42
LSM2-214ENST00000493387 LINC01553A4QN01 128 aa12.43□□□□□ -0.42
LSM2-214ENST00000493387 VNN1O95497 513 aa12.43□□□□□ -0.42
LSM2-214ENST00000493387 CST3P01034 146 aaPredicted RBP12.43□□□□□ -0.42
LSM2-214ENST00000493387 FAM163BP0C2L3 166 aa12.43□□□□□ -0.42
LSM2-214ENST00000493387 BMPR1AP36894 532 aa12.43□□□□□ -0.42
LSM2-214ENST00000493387 LILRA4P59901 499 aa12.43□□□□□ -0.42
LSM2-214ENST00000493387 UBXN1Q04323 297 aa12.43□□□□□ -0.42
LSM2-214ENST00000493387 KRT17Q04695 432 aa12.43□□□□□ -0.42
LSM2-214ENST00000493387 EXOC3L4Q17RC7 722 aa12.43□□□□□ -0.42
LSM2-214ENST00000493387 EPC2Q52LR7 807 aa12.43□□□□□ -0.42
LSM2-214ENST00000493387 SMYD5Q6GMV2 418 aa12.43□□□□□ -0.42
LSM2-214ENST00000493387 SARM1Q6SZW1 724 aa12.43□□□□□ -0.42
LSM2-214ENST00000493387 APTXQ7Z2E3 356 aaKnown RBP12.43□□□□□ -0.42
LSM2-214ENST00000493387 SLC39A11Q8N1S5 342 aa12.43□□□□□ -0.42
LSM2-214ENST00000493387 EHBP1Q8NDI1 1231 aa12.43□□□□□ -0.42
LSM2-214ENST00000493387 CXorf38Q8TB03 319 aa12.43□□□□□ -0.42
LSM2-214ENST00000493387 TAS1R2Q8TE23 839 aa12.43□□□□□ -0.42
LSM2-214ENST00000493387 FAM81BQ96LP2 452 aa12.43□□□□□ -0.42
LSM2-214ENST00000493387 TGS1Q96RS0 853 aaKnown RBP12.43□□□□□ -0.42
LSM2-214ENST00000493387 PBX4Q9BYU1 374 aa12.43□□□□□ -0.42
LSM2-214ENST00000493387 RTN4Q9NQC3 1192 aaKnown RBP12.43□□□□□ -0.42
LSM2-214ENST00000493387 GDAP2Q9NXN4 497 aa12.43□□□□□ -0.42
LSM2-214ENST00000493387 ADAM28Q9UKQ2 775 aa12.43□□□□□ -0.42
LSM2-214ENST00000493387 PRG3Q9Y2Y8 225 aaPredicted RBP12.43□□□□□ -0.42
LSM2-214ENST00000493387 PTPRSQ13332 1948 aa12.43□□□□□ -0.42
LSM2-214ENST00000493387 SF3B1O75533 1304 aaKnown RBP eCLIP12.42□□□□□ -0.42
LSM2-214ENST00000493387 LCHNA4D1U4 455 aa12.42□□□□□ -0.42
LSM2-214ENST00000493387 KPNA7A9QM74 516 aa12.42□□□□□ -0.42
LSM2-214ENST00000493387 B4GALT3O60512 393 aa12.42□□□□□ -0.42
LSM2-214ENST00000493387 CLSTN1O94985 981 aa12.42□□□□□ -0.42
LSM2-214ENST00000493387 ASS1P00966 412 aaKnown RBP12.42□□□□□ -0.42
LSM2-214ENST00000493387 CA3P07451 260 aa12.42□□□□□ -0.42
LSM2-214ENST00000493387 AARSP49588 968 aaKnown RBP eCLIP12.42□□□□□ -0.42
LSM2-214ENST00000493387 MYL6P60660 151 aa12.42□□□□□ -0.42
LSM2-214ENST00000493387 ERVK-21P61565 698 aa12.42□□□□□ -0.42
LSM2-214ENST00000493387 PLCB3Q01970 1234 aa12.42□□□□□ -0.42
LSM2-214ENST00000493387 BMS1Q14692 1282 aaKnown RBP12.42□□□□□ -0.42
LSM2-214ENST00000493387 NR1I3Q14994 352 aa12.42□□□□□ -0.42
LSM2-214ENST00000493387 ZNF699Q32M78 642 aa12.42□□□□□ -0.42
LSM2-214ENST00000493387 ZNF667Q5HYK9 610 aa12.42□□□□□ -0.42
LSM2-214ENST00000493387 SPATA18Q8TC71 538 aa12.42□□□□□ -0.42
LSM2-214ENST00000493387 TMEM169Q96HH4 297 aa12.42□□□□□ -0.42
LSM2-214ENST00000493387 IGSF21Q96ID5 467 aa12.42□□□□□ -0.42
LSM2-214ENST00000493387 SUSD3Q96L08 255 aa12.42□□□□□ -0.42
LSM2-214ENST00000493387 NT5C1BQ96P26 610 aa12.42□□□□□ -0.42
LSM2-214ENST00000493387 ERGIC2Q96RQ1 377 aa12.42□□□□□ -0.42
LSM2-214ENST00000493387 XYLT2Q9H1B5 865 aa12.42□□□□□ -0.42
LSM2-214ENST00000493387 FAM124BQ9H5Z6 455 aaPredicted RBP12.42□□□□□ -0.42
LSM2-214ENST00000493387 SLC28A3Q9HAS3 691 aa12.42□□□□□ -0.42
LSM2-214ENST00000493387 GCNT4Q9P109 453 aa12.42□□□□□ -0.42
LSM2-214ENST00000493387 PUF60Q9UHX1 559 aaKnown RBP12.42□□□□□ -0.42
LSM2-214ENST00000493387 DSEQ9UL01 958 aa12.42□□□□□ -0.42
LSM2-214ENST00000493387 COLQQ9Y215 455 aaPredicted RBP12.42□□□□□ -0.42
LSM2-214ENST00000493387 YBX2Q9Y2T7 364 aaKnown RBP12.42□□□□□ -0.42
LSM2-214ENST00000493387 DAAM1Q9Y4D1 1078 aa12.42□□□□□ -0.42
LSM2-214ENST00000493387 MKI67P46013 3256 aaKnown RBP12.42□□□□□ -0.42
LSM2-214ENST00000493387 TMEM265A0A087WTH1 108 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms