RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 RIN2Q8WYP3 895 aaPredicted RBP8.79□□□□□ -1
TM4SF1-204ENST00000493348 RABGGTAQ92696 567 aa8.79□□□□□ -1
TM4SF1-204ENST00000493348 ZMAT2Q96NC0 199 aaKnown RBP8.79□□□□□ -1
TM4SF1-204ENST00000493348 IMPG2Q9BZV3 1241 aa8.79□□□□□ -1
TM4SF1-204ENST00000493348 ZBP1Q9H171 429 aa8.79□□□□□ -1
TM4SF1-204ENST00000493348 KCTD10Q9H3F6 313 aa8.79□□□□□ -1
TM4SF1-204ENST00000493348 PDE11AQ9HCR9 933 aa8.79□□□□□ -1
TM4SF1-204ENST00000493348 CHD7Q9P2D1 2997 aa8.79□□□□□ -1
TM4SF1-204ENST00000493348 TUBGCP4Q9UGJ1 667 aa8.79□□□□□ -1
TM4SF1-204ENST00000493348 ITGA11Q9UKX5 1188 aa8.79□□□□□ -1
TM4SF1-204ENST00000493348 CTNND2Q9UQB3 1225 aa8.79□□□□□ -1
TM4SF1-204ENST00000493348 FAM189A1O60320 539 aa8.78□□□□□ -1
TM4SF1-204ENST00000493348 LETM1O95202 739 aaPredicted RBP8.78□□□□□ -1
TM4SF1-204ENST00000493348 LINC00271P0C7V0 271 aa8.78□□□□□ -1
TM4SF1-204ENST00000493348 TRIM21P19474 475 aaKnown RBP8.78□□□□□ -1
TM4SF1-204ENST00000493348 LRPAP1P30533 357 aa8.78□□□□□ -1
TM4SF1-204ENST00000493348 HOXD13P35453 343 aa8.78□□□□□ -1
TM4SF1-204ENST00000493348 NRIP1P48552 1158 aa8.78□□□□□ -1
TM4SF1-204ENST00000493348 NDUFV1P49821 464 aa8.78□□□□□ -1
TM4SF1-204ENST00000493348 ERVFC1P60507 584 aa8.78□□□□□ -1
TM4SF1-204ENST00000493348 CETN1Q12798 172 aa8.78□□□□□ -1
TM4SF1-204ENST00000493348 ADGRE1Q14246 886 aa8.78□□□□□ -1
TM4SF1-204ENST00000493348 PSMD6Q15008 389 aa8.78□□□□□ -1
TM4SF1-204ENST00000493348 NFIL3Q16649 462 aa8.78□□□□□ -1
TM4SF1-204ENST00000493348 AAK1Q2M2I8 961 aa8.78□□□□□ -1
TM4SF1-204ENST00000493348 TCEAL5Q5H9L2 206 aa8.78□□□□□ -1
TM4SF1-204ENST00000493348 LMBRD2Q68DH5 695 aaPredicted RBP8.78□□□□□ -1
TM4SF1-204ENST00000493348 CRELD2Q6UXH1 353 aaPredicted RBP8.78□□□□□ -1
TM4SF1-204ENST00000493348 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.78□□□□□ -1
TM4SF1-204ENST00000493348 ANKS3Q6ZW76 656 aa8.78□□□□□ -1
TM4SF1-204ENST00000493348 MLKLQ8NB16 471 aa8.78□□□□□ -1
TM4SF1-204ENST00000493348 CGRRF1Q99675 332 aa8.78□□□□□ -1
TM4SF1-204ENST00000493348 MTMR12Q9C0I1 747 aa8.78□□□□□ -1
TM4SF1-204ENST00000493348 DNAI2Q9GZS0 605 aa8.78□□□□□ -1
TM4SF1-204ENST00000493348 CLDND1Q9NY35 253 aa8.78□□□□□ -1
TM4SF1-204ENST00000493348 CACNG4Q9UBN1 327 aa8.78□□□□□ -1
TM4SF1-204ENST00000493348 DSEQ9UL01 958 aa8.78□□□□□ -1
TM4SF1-204ENST00000493348 COG5Q9UP83 839 aa8.78□□□□□ -1
TM4SF1-204ENST00000493348 AGAP1Q9UPQ3 857 aa8.78□□□□□ -1
TM4SF1-204ENST00000493348 SCN1AP35498 2009 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 SYN3O14994 580 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 MAPK13O15264 365 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 SLC16A3O15427 465 aaKnown RBP8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 B4GALT3O60512 393 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 HUS1O60921 280 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 GNA14O95837 355 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 ITGB3P05106 788 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 ADRB2P07550 413 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 TPM2P07951 284 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 CCDC192P0DO97 292 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 P4HA1P13674 534 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 POLR2BP30876 1174 aaKnown RBP8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 ELF1P32519 619 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 BRCC3P46736 316 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 VAMP7P51809 220 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 GUCY2FP51841 1108 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 STX17P56962 302 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 NLRP12P59046 1061 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 TNNC1P63316 161 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 DSG1Q02413 1049 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 SOX4Q06945 474 aaPredicted RBP8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 BFSP1Q12934 665 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 NAB2Q15742 525 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 PSMD5Q16401 504 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 DCAF17Q5H9S7 520 aaPredicted RBP8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 C9orf57Q5W0N0 161 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 CENPPQ6IPU0 288 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 ZNF280DQ6N043 979 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 LLGL2Q6P1M3 1020 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 TMEM173Q86WV6 379 aaPredicted RBP8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 THEM5Q8N1Q8 247 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 MRPL43Q8N983 215 aaKnown RBP8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 ZSWIM2Q8NEG5 633 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 GPT2Q8TD30 523 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 CASP10Q92851 521 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 HLA-CQ95604 372 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 MFSD14AQ96MC6 490 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 FBXL18Q96ME1 805 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 CEP63Q96MT8 703 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 PAAF1Q9BRP4 392 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 MKNK1Q9BUB5 465 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 GPR62Q9BZJ7 368 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 NAT10Q9H0A0 1025 aaKnown RBP8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 CXCL16Q9H2A7 254 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 MMRN2Q9H8L6 949 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 METTL14Q9HCE5 456 aaKnown RBP8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 INTS13Q9NVM9 706 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 DMAC2Q9NW81 257 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 MARCH5Q9NX47 278 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 MAGEC2Q9UBF1 373 aaPredicted RBP8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 FAM50BQ9Y247 325 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 ATG2AQ2TAZ0 1938 aa8.77□□□□□ -1.01
TM4SF1-204ENST00000493348 MTCL1Q9Y4B5 1905 aaKnown RBP8.76□□□□□ -1.01
TM4SF1-204ENST00000493348 CDH23Q9H251 3354 aa8.76□□□□□ -1.01
TM4SF1-204ENST00000493348 TRIM49BA6NDI0 452 aa8.76□□□□□ -1.01
TM4SF1-204ENST00000493348 C2orf71A6NGG8 1288 aa8.76□□□□□ -1.01
TM4SF1-204ENST00000493348 IKBKBO14920 756 aa8.76□□□□□ -1.01
TM4SF1-204ENST00000493348 FSCN2O14926 492 aa8.76□□□□□ -1.01
TM4SF1-204ENST00000493348 PER2O15055 1255 aa8.76□□□□□ -1.01
TM4SF1-204ENST00000493348 GLUD1P00367 558 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms