RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 FAM3CQ92520 227 aa15□□□□□ -0.01
SAMM50-204ENST00000493161 SMARCD2Q92925 531 aa15□□□□□ -0.01
SAMM50-204ENST00000493161 SECISBP2LQ93073 1101 aaKnown RBP15□□□□□ -0.01
SAMM50-204ENST00000493161 TOPORSQ9NS56 1045 aaPredicted RBP15□□□□□ -0.01
SAMM50-204ENST00000493161 DDX19AQ9NUU7 478 aaKnown RBP15□□□□□ -0.01
SAMM50-204ENST00000493161 SLC38A7Q9NVC3 462 aa15□□□□□ -0.01
SAMM50-204ENST00000493161 CNTN3Q9P232 1028 aa15□□□□□ -0.01
SAMM50-204ENST00000493161 CDV3Q9UKY7 258 aaKnown RBP15□□□□□ -0.01
SAMM50-204ENST00000493161 NUB1Q9Y5A7 615 aa15□□□□□ -0.01
SAMM50-204ENST00000493161 DYNC1LI1Q9Y6G9 523 aaKnown RBP15□□□□□ -0.01
SAMM50-204ENST00000493161 PIAS3Q9Y6X2 628 aa15□□□□□ -0.01
SAMM50-204ENST00000493161 PHLPP2Q6ZVD8 1323 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 SFI1A8K8P3 1242 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 PP2D1A8MPX8 630 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 PRR5-ARHGAP8B1AHC4 643 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 H7C4K7 107 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 MAN2B1O00754 1011 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 ZNF197O14709 1029 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 MICAL2O94851 1124 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 VNN2O95498 520 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 HARSP12081 509 aaKnown RBP14.99□□□□□ -0.01
SAMM50-204ENST00000493161 PSMC3P17980 439 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 MUTP22033 750 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 PROZP22891 400 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 CCNE1P24864 410 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 NEK4P51957 841 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 ARHGAP8P85298 464 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 SATB1Q01826 763 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 MAPK7Q13164 816 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 SRSF5Q13243 272 aaKnown RBP14.99□□□□□ -0.01
SAMM50-204ENST00000493161 TEAD2Q15562 447 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 WDR44Q5JSH3 913 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 TTC38Q5R3I4 469 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 TPGS2Q68CL5 300 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 APBB1IPQ7Z5R6 666 aaPredicted RBP14.99□□□□□ -0.01
SAMM50-204ENST00000493161 ZSCAN18Q8TBC5 510 aaPredicted RBP14.99□□□□□ -0.01
SAMM50-204ENST00000493161 IRF7Q92985 503 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 SUSD3Q96L08 255 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 TBC1D32Q96NH3 1257 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 ACAP3Q96P50 834 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 RUSC1Q9BVN2 902 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 MRPL4Q9BYD3 311 aaKnown RBP14.99□□□□□ -0.01
SAMM50-204ENST00000493161 FAM126AQ9BYI3 521 aaPredicted RBP14.99□□□□□ -0.01
SAMM50-204ENST00000493161 RBM12Q9NTZ6 932 aaKnown RBP14.99□□□□□ -0.01
SAMM50-204ENST00000493161 ARHGAP28Q9P2N2 729 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 LRWD1Q9UFC0 647 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 TUBGCP4Q9UGJ1 667 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 GMEB2Q9UKD1 530 aa14.99□□□□□ -0.01
SAMM50-204ENST00000493161 ARNTLO00327 626 aa14.98□□□□□ -0.01
SAMM50-204ENST00000493161 SLC16A4O15374 487 aa14.98□□□□□ -0.01
SAMM50-204ENST00000493161 OR4Q2P0C623 313 aa14.98□□□□□ -0.01
SAMM50-204ENST00000493161 MCF2P10911 925 aa14.98□□□□□ -0.01
SAMM50-204ENST00000493161 CHRNB1P11230 501 aa14.98□□□□□ -0.01
SAMM50-204ENST00000493161 MCM4P33991 863 aa14.98□□□□□ -0.01
SAMM50-204ENST00000493161 SOX9P48436 509 aa14.98□□□□□ -0.01
SAMM50-204ENST00000493161 FXR2P51116 673 aaKnown RBP eCLIP14.98□□□□□ -0.01
SAMM50-204ENST00000493161 EPHA5P54756 1037 aa14.98□□□□□ -0.01
SAMM50-204ENST00000493161 SAFBQ15424 915 aaKnown RBP eCLIP14.98□□□□□ -0.01
SAMM50-204ENST00000493161 SLC10A6Q3KNW5 377 aa14.98□□□□□ -0.01
SAMM50-204ENST00000493161 CYP4A22Q5TCH4 519 aa14.98□□□□□ -0.01
SAMM50-204ENST00000493161 HAUS3Q68CZ6 603 aa14.98□□□□□ -0.01
SAMM50-204ENST00000493161 MAMSTRQ6ZN01 415 aa14.98□□□□□ -0.01
SAMM50-204ENST00000493161 KCNK18Q7Z418 384 aa14.98□□□□□ -0.01
SAMM50-204ENST00000493161 SHKBP1Q8TBC3 707 aa14.98□□□□□ -0.01
SAMM50-204ENST00000493161 DDX12PQ92771 950 aa14.98□□□□□ -0.01
SAMM50-204ENST00000493161 C8orf76Q96K31 380 aa14.98□□□□□ -0.01
SAMM50-204ENST00000493161 ZNF512Q96ME7 567 aaPredicted RBP14.98□□□□□ -0.01
SAMM50-204ENST00000493161 TCHPQ9BT92 498 aa14.98□□□□□ -0.01
SAMM50-204ENST00000493161 CRISPLD1Q9H336 500 aa14.98□□□□□ -0.01
SAMM50-204ENST00000493161 TMEM134Q9H6X4 195 aa14.98□□□□□ -0.01
SAMM50-204ENST00000493161 TRPV5Q9NQA5 729 aa14.98□□□□□ -0.01
SAMM50-204ENST00000493161 C2orf42Q9NWW7 574 aa14.98□□□□□ -0.01
SAMM50-204ENST00000493161 AFF4Q9UHB7 1163 aaKnown RBP14.98□□□□□ -0.01
SAMM50-204ENST00000493161 TIMM13Q9Y5L4 95 aaPredicted RBP14.98□□□□□ -0.01
SAMM50-204ENST00000493161 SPTBN2O15020 2390 aa14.97□□□□□ -0.01
SAMM50-204ENST00000493161 KMT2BQ9UMN6 2715 aaPredicted RBP14.97□□□□□ -0.01
SAMM50-204ENST00000493161 HEPACAM2A8MVW5 462 aa14.97□□□□□ -0.01
SAMM50-204ENST00000493161 ZNF263O14978 683 aa14.97□□□□□ -0.01
SAMM50-204ENST00000493161 HRO43593 1189 aa14.97□□□□□ -0.01
SAMM50-204ENST00000493161 SDHBP21912 280 aa14.97□□□□□ -0.01
SAMM50-204ENST00000493161 CDC25AP30304 524 aa14.97□□□□□ -0.01
SAMM50-204ENST00000493161 RPL9P32969 192 aaKnown RBP14.97□□□□□ -0.01
SAMM50-204ENST00000493161 SPAG1Q07617 926 aa14.97□□□□□ -0.01
SAMM50-204ENST00000493161 ORC2Q13416 577 aaPredicted RBP14.97□□□□□ -0.01
SAMM50-204ENST00000493161 IL17AQ16552 155 aa14.97□□□□□ -0.01
SAMM50-204ENST00000493161 STXBP5Q5T5C0 1151 aa14.97□□□□□ -0.01
SAMM50-204ENST00000493161 IQCEQ6IPM2 695 aa14.97□□□□□ -0.01
SAMM50-204ENST00000493161 MPZL3Q6UWV2 235 aa14.97□□□□□ -0.01
SAMM50-204ENST00000493161 PRR23BQ6ZRT6 265 aa14.97□□□□□ -0.01
SAMM50-204ENST00000493161 MFSD6LQ8IWD5 586 aa14.97□□□□□ -0.01
SAMM50-204ENST00000493161 CCDC83Q8IWF9 413 aa14.97□□□□□ -0.01
SAMM50-204ENST00000493161 SNX29Q8TEQ0 813 aa14.97□□□□□ -0.01
SAMM50-204ENST00000493161 PGLYRP2Q96PD5 576 aa14.97□□□□□ -0.01
SAMM50-204ENST00000493161 RTKNQ9BST9 563 aa14.97□□□□□ -0.01
SAMM50-204ENST00000493161 LRRC3Q9BY71 257 aa14.97□□□□□ -0.01
SAMM50-204ENST00000493161 FOXP1Q9H334 677 aaPredicted RBP14.97□□□□□ -0.01
SAMM50-204ENST00000493161 TRPV4Q9HBA0 871 aa14.97□□□□□ -0.01
SAMM50-204ENST00000493161 KMT5AQ9NQR1 393 aa14.97□□□□□ -0.01
SAMM50-204ENST00000493161 CHURC1-FNTBB4DL54 471 aa14.96□□□□□ -0.01
SAMM50-204ENST00000493161 CPB1P15086 417 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms