RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 AFMP43652 599 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 MAPK9P45984 424 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 GLRBP48167 497 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 MXRA7P84157 204 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 ACAP1Q15027 740 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 SAPCD2Q86UD0 394 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 KIAA0319LQ8IZA0 1049 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 KRT78Q8N1N4 520 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 ZNF527Q8NB42 609 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 ABHD4Q8TB40 342 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 DPF2Q92785 391 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 TSPAN17Q96FV3 270 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 SLC35A4Q96G79 324 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 TMX3Q96JJ7 454 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 CLPTM1LQ96KA5 538 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 OR10A5Q9H207 317 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 DCP1AQ9NPI6 582 aaPredicted RBP3.58□□□□□ -1.84
SNX13-209ENST00000492626 TMEM140Q9NV12 185 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 FBXO10Q9UK96 956 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 U3KQE9 123 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 SGTAO43765 313 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 PFKMP08237 780 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 PARP1P09874 1014 aaKnown RBP3.58□□□□□ -1.84
SNX13-209ENST00000492626 IDEP14735 1019 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 SERPINB3P29508 390 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 ADSLP30566 484 aaPredicted RBP3.58□□□□□ -1.84
SNX13-209ENST00000492626 MAP2K6P52564 334 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 PFKPQ01813 784 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 MYBPC3Q14896 1274 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 ANKRD45Q5TZF3 282 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 HEATR3Q7Z4Q2 680 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 BMP8AQ7Z5Y6 402 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 RTN4RL1Q86UN2 441 aaPredicted RBP3.58□□□□□ -1.84
SNX13-209ENST00000492626 COL23A1Q86Y22 540 aaPredicted RBP3.58□□□□□ -1.84
SNX13-209ENST00000492626 ANKRD18AQ8IVF6 992 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 CYFIP2Q96F07 1278 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 APIPQ96GX9 242 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 CRB3Q9BUF7 120 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 TAF1DQ9H5J8 278 aaPredicted RBP3.58□□□□□ -1.84
SNX13-209ENST00000492626 KIF24Q5T7B8 1368 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 COL3A1P02461 1466 aaPredicted RBP3.58□□□□□ -1.84
SNX13-209ENST00000492626 ZNF839A8K0R7 811 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 ACOT7O00154 380 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 MYO1CO00159 1063 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 SLC26A4O43511 780 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 SKAP2O75563 359 aaPredicted RBP3.58□□□□□ -1.84
SNX13-209ENST00000492626 CENPBP07199 599 aaPredicted RBP3.58□□□□□ -1.84
SNX13-209ENST00000492626 GNAI3P08754 354 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 TNFSF4P23510 183 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 MC4RP32245 332 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 MEOX1P50221 254 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 GNAI1P63096 354 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 PRR5P85299 388 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 SATB1Q01826 763 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 MEF2AQ02078 507 aaPredicted RBP3.58□□□□□ -1.84
SNX13-209ENST00000492626 TARBP2Q15633 366 aaKnown RBP3.58□□□□□ -1.84
SNX13-209ENST00000492626 FAM209BQ5JX69 171 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 IZUMO3Q5VZ72 239 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 FBXO38Q6PIJ6 1188 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 TMED8Q6PL24 325 aaPredicted RBP3.58□□□□□ -1.84
SNX13-209ENST00000492626 BEND5Q7L4P6 421 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 SKAP1Q86WV1 359 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 ZDHHC13Q8IUH4 622 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 OR2C3Q8N628 320 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 ZNF566Q969W8 418 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 PLCD4Q9BRC7 762 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 PNPOQ9NVS9 261 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 MTMR10Q9NXD2 777 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 LUZP4Q9P127 313 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 ABCF2Q9UG63 623 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 SERPINB13Q9UIV8 391 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 TELO2Q9Y4R8 837 aa3.58□□□□□ -1.84
SNX13-209ENST00000492626 A0A0A6YYJ9 748 aa3.57□□□□□ -1.84
SNX13-209ENST00000492626 CD8BP10966 210 aa3.57□□□□□ -1.84
SNX13-209ENST00000492626 MCAMP43121 646 aa3.57□□□□□ -1.84
SNX13-209ENST00000492626 TRIM25Q14258 630 aaKnown RBP3.57□□□□□ -1.84
SNX13-209ENST00000492626 AKNAD1Q5T1N1 836 aa3.57□□□□□ -1.84
SNX13-209ENST00000492626 CCDC174Q6PII3 467 aa3.57□□□□□ -1.84
SNX13-209ENST00000492626 TMC5Q6UXY8 1006 aa3.57□□□□□ -1.84
SNX13-209ENST00000492626 PDZD4Q76G19 769 aaPredicted RBP3.57□□□□□ -1.84
SNX13-209ENST00000492626 RTKN2Q8IZC4 609 aa3.57□□□□□ -1.84
SNX13-209ENST00000492626 RIN2Q8WYP3 895 aaPredicted RBP3.57□□□□□ -1.84
SNX13-209ENST00000492626 UNKQ9C0B0 810 aaKnown RBP3.57□□□□□ -1.84
SNX13-209ENST00000492626 MAF1Q9H063 256 aa3.57□□□□□ -1.84
SNX13-209ENST00000492626 DLL4Q9NR61 685 aa3.57□□□□□ -1.84
SNX13-209ENST00000492626 POLR3BQ9NW08 1133 aaPredicted RBP3.57□□□□□ -1.84
SNX13-209ENST00000492626 PIH1D1Q9NWS0 290 aaKnown RBP3.57□□□□□ -1.84
SNX13-209ENST00000492626 RBAK-RBAKDNI3L0D1 243 aa3.57□□□□□ -1.84
SNX13-209ENST00000492626 TBC1D4O60343 1298 aa3.57□□□□□ -1.84
SNX13-209ENST00000492626 PSPNO60542 156 aa3.57□□□□□ -1.84
SNX13-209ENST00000492626 OPHN1O60890 802 aa3.57□□□□□ -1.84
SNX13-209ENST00000492626 GDNFP39905 211 aa3.57□□□□□ -1.84
SNX13-209ENST00000492626 CASP2P42575 452 aa3.57□□□□□ -1.84
SNX13-209ENST00000492626 ALDH5A1P51649 535 aaPredicted RBP3.57□□□□□ -1.84
SNX13-209ENST00000492626 CDC42EP1Q00587 391 aa3.57□□□□□ -1.84
SNX13-209ENST00000492626 IL10RAQ13651 578 aa3.57□□□□□ -1.84
SNX13-209ENST00000492626 DOC2BQ14184 412 aa3.57□□□□□ -1.84
SNX13-209ENST00000492626 PUM3Q15397 648 aaKnown RBP3.57□□□□□ -1.84
SNX13-209ENST00000492626 C3orf36Q3SXR2 165 aa3.57□□□□□ -1.84
SNX13-209ENST00000492626 KRT40Q6A162 431 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms