RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 CAPSQ13938 189 aa12.96□□□□□ -0.33
CACNA1C-228ENST00000492150 CTTNQ14247 550 aaKnown RBP12.96□□□□□ -0.33
CACNA1C-228ENST00000492150 MXD4Q14582 209 aaPredicted RBP12.96□□□□□ -0.33
CACNA1C-228ENST00000492150 KARSQ15046 597 aaKnown RBP12.96□□□□□ -0.33
CACNA1C-228ENST00000492150 PABPC1LQ4VXU2 614 aaKnown RBP12.96□□□□□ -0.33
CACNA1C-228ENST00000492150 RTP2Q5QGT7 225 aa12.96□□□□□ -0.33
CACNA1C-228ENST00000492150 CDR2LQ86X02 465 aaPredicted RBP12.96□□□□□ -0.33
CACNA1C-228ENST00000492150 MDM1Q8TC05 714 aa12.96□□□□□ -0.33
CACNA1C-228ENST00000492150 CLSTN3Q9BQT9 956 aa12.96□□□□□ -0.33
CACNA1C-228ENST00000492150 PAAF1Q9BRP4 392 aa12.96□□□□□ -0.33
CACNA1C-228ENST00000492150 ZSWIM4Q9H7M6 989 aa12.96□□□□□ -0.33
CACNA1C-228ENST00000492150 KLK14Q9P0G3 267 aa12.96□□□□□ -0.33
CACNA1C-228ENST00000492150 CACNG4Q9UBN1 327 aa12.96□□□□□ -0.33
CACNA1C-228ENST00000492150 VWA8A3KMH1 1905 aa12.96□□□□□ -0.34
CACNA1C-228ENST00000492150 PTPRBP23467 1997 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 ARNTLO00327 626 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 CAPN9O14815 690 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 TBX3O15119 743 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 TADA2AO75478 443 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 SLITRK3O94933 977 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 NPTXRO95502 500 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 GCFC2P16383 781 aaKnown RBP12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 PSMC3P17980 439 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 HOXC13P31276 330 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 ARL2P36404 184 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 CYP4A11Q02928 519 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 KCNC4Q03721 635 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 NCBP1Q09161 790 aaKnown RBP12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 LMAN2Q12907 356 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 GRIK3Q13003 919 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 SEMA3BQ13214 749 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 HNRNPDQ14103 355 aaKnown RBP12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 TFDP1Q14186 410 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 UAP1L1Q3KQV9 507 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 WDR44Q5JSH3 913 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 NCAPH2Q6IBW4 605 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 RTL10Q7L3V2 364 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 NEK8Q86SG6 692 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 POTEDQ86YR6 584 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 DEPDC1BQ8WUY9 529 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 ADAMTS14Q8WXS8 1223 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 CRELD1Q96HD1 420 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 LARP6Q9BRS8 491 aaKnown RBP12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 TRIM6Q9C030 488 aaPredicted RBP12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 ZFP14Q9HCL3 533 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 DNMT3BQ9UBC3 853 aaKnown RBP12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 MYO9AB2RTY4 2548 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 TSC2P49815 1807 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 ARID2Q68CP9 1835 aa12.95□□□□□ -0.34
CACNA1C-228ENST00000492150 ZMYM2Q9UBW7 1377 aa12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 PI4KAP42356 2102 aa12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 A0A1B0GUA9 196 aa12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 CCDC194A0A1B0GVG4 234 aa12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 CPLX1O14810 134 aa12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 CCL16O15467 120 aa12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 ADAM12O43184 909 aa12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 CCNT1O60563 726 aaKnown RBP12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 GLRA2P23416 452 aa12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 CCINQ13939 588 aa12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 GRM2Q14416 872 aa12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 HSP90AA2PQ14568 343 aaPredicted RBP12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 SLC27A1Q6PCB7 646 aa12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 RUFY3Q7L099 469 aa12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 TPH2Q8IWU9 490 aa12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 HACE1Q8IYU2 909 aa12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 CAMKK1Q8N5S9 505 aa12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 LNX1Q8TBB1 728 aaPredicted RBP12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 OXER1Q8TDS5 423 aa12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 MCRS1Q96EZ8 462 aa12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 ZNF274Q96GC6 653 aaPredicted RBP12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 NFKBIZQ9BYH8 718 aa12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 C8orf33Q9H7E9 229 aaPredicted RBP12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 ZSWIM6Q9HCJ5 1215 aa12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 PARP2Q9UGN5 583 aa12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 EVLQ9UI08 416 aaPredicted RBP12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 POLIQ9UNA4 740 aa12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 MRPS23Q9Y3D9 190 aaKnown RBP12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 ANKRD17O75179 2603 aaKnown RBP12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 THADAQ6YHU6 1953 aa12.94□□□□□ -0.34
CACNA1C-228ENST00000492150 SF3B1O75533 1304 aaKnown RBP eCLIP12.93□□□□□ -0.34
CACNA1C-228ENST00000492150 LYPLA2O95372 231 aa12.93□□□□□ -0.34
CACNA1C-228ENST00000492150 GDI1P31150 447 aa12.93□□□□□ -0.34
CACNA1C-228ENST00000492150 STK3Q13188 491 aa12.93□□□□□ -0.34
CACNA1C-228ENST00000492150 PSMD5Q16401 504 aa12.93□□□□□ -0.34
CACNA1C-228ENST00000492150 UVSSAQ2YD98 709 aa12.93□□□□□ -0.34
CACNA1C-228ENST00000492150 EARS2Q5JPH6 523 aaKnown RBP12.93□□□□□ -0.34
CACNA1C-228ENST00000492150 FAM171A1Q5VUB5 890 aa12.93□□□□□ -0.34
CACNA1C-228ENST00000492150 POTEHQ6S545 545 aa12.93□□□□□ -0.34
CACNA1C-228ENST00000492150 ABCA7Q8IZY2 2146 aa12.93□□□□□ -0.34
CACNA1C-228ENST00000492150 HASPINQ8TF76 798 aa12.93□□□□□ -0.34
CACNA1C-228ENST00000492150 ING5Q8WYH8 240 aa12.93□□□□□ -0.34
CACNA1C-228ENST00000492150 HSD17B14Q9BPX1 270 aa12.93□□□□□ -0.34
CACNA1C-228ENST00000492150 EIF2AK1Q9BQI3 630 aaKnown RBP12.93□□□□□ -0.34
CACNA1C-228ENST00000492150 TTPALQ9BTX7 342 aa12.93□□□□□ -0.34
CACNA1C-228ENST00000492150 CXCL16Q9H2A7 254 aa12.93□□□□□ -0.34
CACNA1C-228ENST00000492150 GJB4Q9NTQ9 266 aa12.93□□□□□ -0.34
CACNA1C-228ENST00000492150 CASTOR2A6NHX0 329 aa12.92□□□□□ -0.34
CACNA1C-228ENST00000492150 PTGESO14684 152 aa12.92□□□□□ -0.34
CACNA1C-228ENST00000492150 MEFVO15553 781 aaPredicted RBP12.92□□□□□ -0.34
CACNA1C-228ENST00000492150 EXTL3O43909 919 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms