RNA–Protein interactions for RNA: ENST00000492142.5

TRO-223, Transcript of trophinin, human

TSL 3

Gene TRO, Length 485 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRO-223	ENST00000492142	GTPBP10	A4D1E9	387 aa	Known RBP	10.5	□□□□□ -0.73
TRO-223	ENST00000492142	CASTOR2	A6NHX0	329 aa		10.5	□□□□□ -0.73
TRO-223	ENST00000492142	PPEF2	O14830	753 aa		10.5	□□□□□ -0.73
TRO-223	ENST00000492142	PMM2	O15305	246 aa		10.5	□□□□□ -0.73
TRO-223	ENST00000492142	INPPL1	O15357	1258 aa		10.5	□□□□□ -0.73
TRO-223	ENST00000492142	DGKI	O75912	1065 aa		10.5	□□□□□ -0.73
TRO-223	ENST00000492142	DDHD2	O94830	711 aa		10.5	□□□□□ -0.73
TRO-223	ENST00000492142	CYP3A5	P20815	502 aa		10.5	□□□□□ -0.73
TRO-223	ENST00000492142	PON1	P27169	355 aa		10.5	□□□□□ -0.73
TRO-223	ENST00000492142	GRIK3	Q13003	919 aa		10.5	□□□□□ -0.73
TRO-223	ENST00000492142	TUSC3	Q13454	348 aa		10.5	□□□□□ -0.73
TRO-223	ENST00000492142	SHH	Q15465	462 aa		10.5	□□□□□ -0.73
TRO-223	ENST00000492142	NAB2	Q15742	525 aa		10.5	□□□□□ -0.73
TRO-223	ENST00000492142	WDR44	Q5JSH3	913 aa		10.5	□□□□□ -0.73
TRO-223	ENST00000492142	C9orf50	Q5SZB4	431 aa		10.5	□□□□□ -0.73
TRO-223	ENST00000492142	C9orf57	Q5W0N0	161 aa		10.5	□□□□□ -0.73
TRO-223	ENST00000492142	VSTM4	Q8IW00	320 aa		10.5	□□□□□ -0.73
TRO-223	ENST00000492142	LMO3	Q8TAP4	145 aa		10.5	□□□□□ -0.73
TRO-223	ENST00000492142	ERGIC2	Q96RQ1	377 aa		10.5	□□□□□ -0.73
TRO-223	ENST00000492142	UBE2O	Q9C0C9	1292 aa	Known RBP	10.5	□□□□□ -0.73
TRO-223	ENST00000492142	MTIF3	Q9H2K0	278 aa	Known RBP	10.5	□□□□□ -0.73
TRO-223	ENST00000492142	HCST	Q9UBK5	93 aa		10.5	□□□□□ -0.73
TRO-223	ENST00000492142	ITGA11	Q9UKX5	1188 aa		10.5	□□□□□ -0.73
TRO-223	ENST00000492142	SIK3	Q9Y2K2	1263 aa		10.5	□□□□□ -0.73
TRO-223	ENST00000492142	COQ4	Q9Y3A0	265 aa		10.5	□□□□□ -0.73
TRO-223	ENST00000492142	PDCD11	Q14690	1871 aa	Known RBP	10.5	□□□□□ -0.73
TRO-223	ENST00000492142	TDRD15	B5MCY1	1934 aa	Known RBP	10.5	□□□□□ -0.73
TRO-223	ENST00000492142		A0A1W2PQC6	194 aa		10.49	□□□□□ -0.73
TRO-223	ENST00000492142	B4GALT3	O60512	393 aa		10.49	□□□□□ -0.73
TRO-223	ENST00000492142	ATP2A2	P16615	1042 aa	Known RBP	10.49	□□□□□ -0.73
TRO-223	ENST00000492142	IGFBP6	P24592	240 aa	Predicted RBP	10.49	□□□□□ -0.73
TRO-223	ENST00000492142	PBX1	P40424	430 aa		10.49	□□□□□ -0.73
TRO-223	ENST00000492142	OR1G1	P47890	313 aa		10.49	□□□□□ -0.73
TRO-223	ENST00000492142	PSEN1	P49768	467 aa		10.49	□□□□□ -0.73
TRO-223	ENST00000492142	RGS19	P49795	217 aa		10.49	□□□□□ -0.73
TRO-223	ENST00000492142	PDAP1	Q13442	181 aa	Known RBP	10.49	□□□□□ -0.73
TRO-223	ENST00000492142	SGSM1	Q2NKQ1	1148 aa		10.49	□□□□□ -0.73
TRO-223	ENST00000492142	SPOPL	Q6IQ16	392 aa		10.49	□□□□□ -0.73
TRO-223	ENST00000492142	GJB7	Q6PEY0	223 aa		10.49	□□□□□ -0.73
TRO-223	ENST00000492142	TMC6	Q7Z403	805 aa		10.49	□□□□□ -0.73
TRO-223	ENST00000492142	HERC6	Q8IVU3	1022 aa		10.49	□□□□□ -0.73
TRO-223	ENST00000492142	COLGALT2	Q8IYK4	626 aa		10.49	□□□□□ -0.73
TRO-223	ENST00000492142	CCDC150	Q8NCX0	1101 aa		10.49	□□□□□ -0.73
TRO-223	ENST00000492142	NEK11	Q8NG66	645 aa		10.49	□□□□□ -0.73
TRO-223	ENST00000492142	CXorf38	Q8TB03	319 aa		10.49	□□□□□ -0.73
TRO-223	ENST00000492142	CPLX3	Q8WVH0	158 aa		10.49	□□□□□ -0.73
TRO-223	ENST00000492142	ANP32B	Q92688	251 aa	Known RBP	10.49	□□□□□ -0.73
TRO-223	ENST00000492142	TATDN2	Q93075	761 aa		10.49	□□□□□ -0.73
TRO-223	ENST00000492142	MRFAP1L1	Q96HT8	127 aa		10.49	□□□□□ -0.73
TRO-223	ENST00000492142	HPDL	Q96IR7	371 aa		10.49	□□□□□ -0.73
TRO-223	ENST00000492142	RNPC3	Q96LT9	517 aa	Known RBP	10.49	□□□□□ -0.73
TRO-223	ENST00000492142	YME1L1	Q96TA2	773 aa		10.49	□□□□□ -0.73
TRO-223	ENST00000492142	PAAF1	Q9BRP4	392 aa		10.49	□□□□□ -0.73
TRO-223	ENST00000492142	MRPL9	Q9BYD2	267 aa	Known RBP	10.49	□□□□□ -0.73
TRO-223	ENST00000492142	NRDE2	Q9H7Z3	1164 aa		10.49	□□□□□ -0.73
TRO-223	ENST00000492142	FAM207A	Q9NSI2	230 aa	Predicted RBP	10.49	□□□□□ -0.73
TRO-223	ENST00000492142	DNAJB4	Q9UDY4	337 aa		10.49	□□□□□ -0.73
TRO-223	ENST00000492142	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	10.49	□□□□□ -0.73
TRO-223	ENST00000492142	SCN1A	P35498	2009 aa		10.48	□□□□□ -0.73
TRO-223	ENST00000492142	ANO9	A1A5B4	782 aa		10.48	□□□□□ -0.73
TRO-223	ENST00000492142	PODXL	O00592	558 aa		10.48	□□□□□ -0.73
TRO-223	ENST00000492142	PIR	O00625	290 aa		10.48	□□□□□ -0.73
TRO-223	ENST00000492142	ZC3H11A	O75152	810 aa	Known RBP eCLIP	10.48	□□□□□ -0.73
TRO-223	ENST00000492142	GJB5	O95377	273 aa		10.48	□□□□□ -0.73
TRO-223	ENST00000492142	ASS1	P00966	412 aa	Known RBP	10.48	□□□□□ -0.73
TRO-223	ENST00000492142	LRPAP1	P30533	357 aa		10.48	□□□□□ -0.73
TRO-223	ENST00000492142	RPL9	P32969	192 aa	Known RBP	10.48	□□□□□ -0.73
TRO-223	ENST00000492142	CLCNKB	P51801	687 aa		10.48	□□□□□ -0.73
TRO-223	ENST00000492142	MYO1E	Q12965	1108 aa		10.48	□□□□□ -0.73
TRO-223	ENST00000492142	BTG3	Q14201	252 aa	Predicted RBP	10.48	□□□□□ -0.73
TRO-223	ENST00000492142	ZNF699	Q32M78	642 aa		10.48	□□□□□ -0.73
TRO-223	ENST00000492142	SPOUT1	Q5T280	376 aa	Known RBP	10.48	□□□□□ -0.73
TRO-223	ENST00000492142	RASIP1	Q5U651	963 aa		10.48	□□□□□ -0.73
TRO-223	ENST00000492142	KLHDC7A	Q5VTJ3	777 aa		10.48	□□□□□ -0.73
TRO-223	ENST00000492142	SPECC1L	Q69YQ0	1117 aa		10.48	□□□□□ -0.73
TRO-223	ENST00000492142	PHLDB3	Q6NSJ2	640 aa		10.48	□□□□□ -0.73
TRO-223	ENST00000492142	DPY19L2P1	Q6NXN4	242 aa		10.48	□□□□□ -0.73
TRO-223	ENST00000492142	TRIM65	Q6PJ69	517 aa		10.48	□□□□□ -0.73
TRO-223	ENST00000492142	DCLRE1A	Q6PJP8	1040 aa		10.48	□□□□□ -0.73
TRO-223	ENST00000492142	RRAGA	Q7L523	313 aa		10.48	□□□□□ -0.73
TRO-223	ENST00000492142	ARHGEF19	Q8IW93	802 aa		10.48	□□□□□ -0.73
TRO-223	ENST00000492142	SPC24	Q8NBT2	197 aa		10.48	□□□□□ -0.73
TRO-223	ENST00000492142	PHOSPHO2	Q8TCD6	241 aa		10.48	□□□□□ -0.73
TRO-223	ENST00000492142	ZNF689	Q96CS4	500 aa	Predicted RBP	10.48	□□□□□ -0.73
TRO-223	ENST00000492142	DDX27	Q96GQ7	796 aa	Known RBP	10.48	□□□□□ -0.73
TRO-223	ENST00000492142	NT5C1B	Q96P26	610 aa		10.48	□□□□□ -0.73
TRO-223	ENST00000492142	SLC9A7	Q96T83	725 aa		10.48	□□□□□ -0.73
TRO-223	ENST00000492142	IMPG2	Q9BZV3	1241 aa		10.48	□□□□□ -0.73
TRO-223	ENST00000492142	XYLT2	Q9H1B5	865 aa		10.48	□□□□□ -0.73
TRO-223	ENST00000492142	APOBEC3G	Q9HC16	384 aa	Known RBP	10.48	□□□□□ -0.73
TRO-223	ENST00000492142	SIX2	Q9NPC8	291 aa		10.48	□□□□□ -0.73
TRO-223	ENST00000492142	UBE2T	Q9NPD8	197 aa	Predicted RBP	10.48	□□□□□ -0.73
TRO-223	ENST00000492142	NXF1	Q9UBU9	619 aa	Known RBP	10.48	□□□□□ -0.73
TRO-223	ENST00000492142	PRG3	Q9Y2Y8	225 aa	Predicted RBP	10.48	□□□□□ -0.73
TRO-223	ENST00000492142	NUB1	Q9Y5A7	615 aa		10.48	□□□□□ -0.73
TRO-223	ENST00000492142	PTPRS	Q13332	1948 aa		10.47	□□□□□ -0.73
TRO-223	ENST00000492142	GRXCR1	A8MXD5	290 aa		10.47	□□□□□ -0.73
TRO-223	ENST00000492142		F8W810	466 aa		10.47	□□□□□ -0.73
TRO-223	ENST00000492142	EPHB6	O15197	1021 aa		10.47	□□□□□ -0.73
TRO-223	ENST00000492142	SPTLC1	O15269	473 aa		10.47	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 47 ms