RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 PCDHA7Q9UN72 937 aa16.39■□□□□ 0.21
USP39-217ENST00000491659 SORCS3Q9UPU3 1222 aa16.39■□□□□ 0.21
USP39-217ENST00000491659 DERAQ9Y315 318 aa16.39■□□□□ 0.21
USP39-217ENST00000491659 TSC2P49815 1807 aa16.39■□□□□ 0.21
USP39-217ENST00000491659 TCHHQ07283 1943 aa16.39■□□□□ 0.21
USP39-217ENST00000491659 POLR2DO15514 142 aaKnown RBP16.38■□□□□ 0.21
USP39-217ENST00000491659 PAPLNO95428 1278 aa16.38■□□□□ 0.21
USP39-217ENST00000491659 ADRB2P07550 413 aa16.38■□□□□ 0.21
USP39-217ENST00000491659 NFICP08651 508 aa16.38■□□□□ 0.21
USP39-217ENST00000491659 HNRNPA1P09651 372 aaKnown RBP eCLIP16.38■□□□□ 0.21
USP39-217ENST00000491659 HOXA9P31269 272 aa16.38■□□□□ 0.21
USP39-217ENST00000491659 CASP5P51878 434 aa16.38■□□□□ 0.21
USP39-217ENST00000491659 KCNA1Q09470 495 aa16.38■□□□□ 0.21
USP39-217ENST00000491659 MTMR3Q13615 1198 aa16.38■□□□□ 0.21
USP39-217ENST00000491659 RESP18Q5W5W9 173 aa16.38■□□□□ 0.21
USP39-217ENST00000491659 TRIM67Q6ZTA4 783 aa16.38■□□□□ 0.21
USP39-217ENST00000491659 SLC7A14Q8TBB6 771 aa16.38■□□□□ 0.21
USP39-217ENST00000491659 IKZF4Q9H2S9 585 aa16.38■□□□□ 0.21
USP39-217ENST00000491659 ASB7Q9H672 318 aa16.38■□□□□ 0.21
USP39-217ENST00000491659 TMEM206Q9H813 350 aa16.38■□□□□ 0.21
USP39-217ENST00000491659 PCDHB8Q9UN66 801 aa16.38■□□□□ 0.21
USP39-217ENST00000491659 C2CD2Q9Y426 696 aa16.38■□□□□ 0.21
USP39-217ENST00000491659 XYLBO75191 536 aa16.37■□□□□ 0.21
USP39-217ENST00000491659 IL18RAPO95256 599 aa16.37■□□□□ 0.21
USP39-217ENST00000491659 GBP2P32456 591 aaPredicted RBP16.37■□□□□ 0.21
USP39-217ENST00000491659 GUCY2FP51841 1108 aa16.37■□□□□ 0.21
USP39-217ENST00000491659 KRT85P78386 507 aa16.37■□□□□ 0.21
USP39-217ENST00000491659 POU5F1Q01860 360 aaKnown RBP16.37■□□□□ 0.21
USP39-217ENST00000491659 ROR1Q01973 937 aa16.37■□□□□ 0.21
USP39-217ENST00000491659 SIGLEC14Q08ET2 396 aa16.37■□□□□ 0.21
USP39-217ENST00000491659 BECN1Q14457 450 aa16.37■□□□□ 0.21
USP39-217ENST00000491659 CTXN3Q4LDR2 81 aa16.37■□□□□ 0.21
USP39-217ENST00000491659 SPATA1Q5VX52 437 aa16.37■□□□□ 0.21
USP39-217ENST00000491659 SLC8B1Q6J4K2 584 aa16.37■□□□□ 0.21
USP39-217ENST00000491659 RSPO2Q6UXX9 243 aaPredicted RBP16.37■□□□□ 0.21
USP39-217ENST00000491659 RTL10Q7L3V2 364 aa16.37■□□□□ 0.21
USP39-217ENST00000491659 GET4Q7L5D6 327 aaPredicted RBP16.37■□□□□ 0.21
USP39-217ENST00000491659 LIMD1Q9UGP4 676 aa16.37■□□□□ 0.21
USP39-217ENST00000491659 RCOR1Q9UKL0 485 aa16.37■□□□□ 0.21
USP39-217ENST00000491659 ATP6V1DQ9Y5K8 247 aa16.37■□□□□ 0.21
USP39-217ENST00000491659 TMEM221A6NGB7 291 aa16.36■□□□□ 0.21
USP39-217ENST00000491659 M0QZQ0 153 aa16.36■□□□□ 0.21
USP39-217ENST00000491659 M0R296 226 aa16.36■□□□□ 0.21
USP39-217ENST00000491659 CCL16O15467 120 aa16.36■□□□□ 0.21
USP39-217ENST00000491659 PRPF6O94906 941 aaKnown RBP16.36■□□□□ 0.21
USP39-217ENST00000491659 LDHAP00338 332 aaKnown RBP16.36■□□□□ 0.21
USP39-217ENST00000491659 GARTP22102 1010 aa16.36■□□□□ 0.21
USP39-217ENST00000491659 ADSSP30520 456 aa16.36■□□□□ 0.21
USP39-217ENST00000491659 ELF1P32519 619 aa16.36■□□□□ 0.21
USP39-217ENST00000491659 ARPP19P56211 112 aa16.36■□□□□ 0.21
USP39-217ENST00000491659 UVSSAQ2YD98 709 aa16.36■□□□□ 0.21
USP39-217ENST00000491659 DSTYKQ6XUX3 929 aa16.36■□□□□ 0.21
USP39-217ENST00000491659 UBALD2Q8IYN6 164 aa16.36■□□□□ 0.21
USP39-217ENST00000491659 TMEM130Q8N3G9 435 aa16.36■□□□□ 0.21
USP39-217ENST00000491659 SPATA32Q96LK8 384 aa16.36■□□□□ 0.21
USP39-217ENST00000491659 FGFBP2Q9BYJ0 223 aa16.36■□□□□ 0.21
USP39-217ENST00000491659 FBXL5Q9UKA1 691 aa16.36■□□□□ 0.21
USP39-217ENST00000491659 POLIQ9UNA4 740 aa16.36■□□□□ 0.21
USP39-217ENST00000491659 MYO10Q9HD67 2058 aa16.35■□□□□ 0.21
USP39-217ENST00000491659 WDR27A2RRH5 827 aa16.35■□□□□ 0.21
USP39-217ENST00000491659 TULP1O00294 542 aaPredicted RBP16.35■□□□□ 0.21
USP39-217ENST00000491659 ASGR2P07307 311 aa16.35■□□□□ 0.21
USP39-217ENST00000491659 POU2F2P09086 479 aa16.35■□□□□ 0.21
USP39-217ENST00000491659 ODC1P11926 461 aa16.35■□□□□ 0.21
USP39-217ENST00000491659 CPB1P15086 417 aa16.35■□□□□ 0.21
USP39-217ENST00000491659 PAX3P23760 479 aa16.35■□□□□ 0.21
USP39-217ENST00000491659 AARSP49588 968 aaKnown RBP eCLIP16.35■□□□□ 0.21
USP39-217ENST00000491659 YWHAHQ04917 246 aaPredicted RBP16.35■□□□□ 0.21
USP39-217ENST00000491659 MRPL58Q14197 206 aaKnown RBP16.35■□□□□ 0.21
USP39-217ENST00000491659 FAM26FQ5R3K3 315 aa16.35■□□□□ 0.21
USP39-217ENST00000491659 ARMCX5Q6P1M9 558 aa16.35■□□□□ 0.21
USP39-217ENST00000491659 CNNM4Q6P4Q7 775 aa16.35■□□□□ 0.21
USP39-217ENST00000491659 HFE2Q6ZVN8 426 aa16.35■□□□□ 0.21
USP39-217ENST00000491659 USP37Q86T82 979 aa16.35■□□□□ 0.21
USP39-217ENST00000491659 NT5DC4Q86YG4 428 aa16.35■□□□□ 0.21
USP39-217ENST00000491659 BRSK2Q8IWQ3 736 aa16.35■□□□□ 0.21
USP39-217ENST00000491659 CEP57L1Q8IYX8 460 aa16.35■□□□□ 0.21
USP39-217ENST00000491659 ZNF461Q8TAF7 563 aa16.35■□□□□ 0.21
USP39-217ENST00000491659 NOC3LQ8WTT2 800 aaKnown RBP16.35■□□□□ 0.21
USP39-217ENST00000491659 SAAL1Q96ER3 474 aa16.35■□□□□ 0.21
USP39-217ENST00000491659 MFSD14AQ96MC6 490 aa16.35■□□□□ 0.21
USP39-217ENST00000491659 C7orf25Q9BPX7 421 aa16.35■□□□□ 0.21
USP39-217ENST00000491659 FAM213AQ9BRX8 229 aa16.35■□□□□ 0.21
USP39-217ENST00000491659 OXCT2Q9BYC2 517 aaPredicted RBP16.35■□□□□ 0.21
USP39-217ENST00000491659 RAPGEFL1Q9UHV5 662 aa16.35■□□□□ 0.21
USP39-217ENST00000491659 KCNH3Q9ULD8 1083 aa16.35■□□□□ 0.21
USP39-217ENST00000491659 TECTAO75443 2155 aa16.35■□□□□ 0.21
USP39-217ENST00000491659 DOCK8Q8NF50 2099 aa16.34■□□□□ 0.21
USP39-217ENST00000491659 ARHGEF37A1IGU5 675 aa16.34■□□□□ 0.21
USP39-217ENST00000491659 PRRG1O14668 218 aa16.34■□□□□ 0.21
USP39-217ENST00000491659 KIAA0391O15091 583 aaKnown RBP16.34■□□□□ 0.21
USP39-217ENST00000491659 EIF3DO15371 548 aaKnown RBP eCLIP16.34■□□□□ 0.21
USP39-217ENST00000491659 TBC1D4O60343 1298 aa16.34■□□□□ 0.21
USP39-217ENST00000491659 LRG1P02750 347 aa16.34■□□□□ 0.21
USP39-217ENST00000491659 FSHRP23945 695 aa16.34■□□□□ 0.21
USP39-217ENST00000491659 C9orf57Q5W0N0 161 aa16.34■□□□□ 0.21
USP39-217ENST00000491659 TPGS2Q68CL5 300 aa16.34■□□□□ 0.21
USP39-217ENST00000491659 CRELD2Q6UXH1 353 aaPredicted RBP16.34■□□□□ 0.21
USP39-217ENST00000491659 UNC13DQ70J99 1090 aa16.34■□□□□ 0.21
USP39-217ENST00000491659 GRASPQ7Z6J2 395 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms