RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 ATF2P15336 505 aa17.13■□□□□ 0.33
SMPD4-220ENST00000491319 CEBPBP17676 345 aa17.13■□□□□ 0.33
SMPD4-220ENST00000491319 PLCG1P19174 1290 aa17.13■□□□□ 0.33
SMPD4-220ENST00000491319 ELF1P32519 619 aa17.13■□□□□ 0.33
SMPD4-220ENST00000491319 UBA7P41226 1012 aa17.13■□□□□ 0.33
SMPD4-220ENST00000491319 LIG4P49917 911 aa17.13■□□□□ 0.33
SMPD4-220ENST00000491319 MCM6Q14566 821 aa17.13■□□□□ 0.33
SMPD4-220ENST00000491319 KARSQ15046 597 aaKnown RBP17.13■□□□□ 0.33
SMPD4-220ENST00000491319 CTXN3Q4LDR2 81 aa17.13■□□□□ 0.33
SMPD4-220ENST00000491319 ZBTB41Q5SVQ8 909 aa17.13■□□□□ 0.33
SMPD4-220ENST00000491319 ZNF280DQ6N043 979 aa17.13■□□□□ 0.33
SMPD4-220ENST00000491319 POTEHQ6S545 545 aa17.13■□□□□ 0.33
SMPD4-220ENST00000491319 DDX12PQ92771 950 aa17.13■□□□□ 0.33
SMPD4-220ENST00000491319 CYP4F11Q9HBI6 524 aa17.13■□□□□ 0.33
SMPD4-220ENST00000491319 INSL5Q9Y5Q6 135 aa17.13■□□□□ 0.33
SMPD4-220ENST00000491319 FAM189A1O60320 539 aa17.12■□□□□ 0.33
SMPD4-220ENST00000491319 FAM13AO94988 1023 aa17.12■□□□□ 0.33
SMPD4-220ENST00000491319 CLTAP09496 248 aa17.12■□□□□ 0.33
SMPD4-220ENST00000491319 ZNF131P52739 623 aa17.12■□□□□ 0.33
SMPD4-220ENST00000491319 PPP2R3AQ06190 1150 aa17.12■□□□□ 0.33
SMPD4-220ENST00000491319 SNW1Q13573 536 aaKnown RBP17.12■□□□□ 0.33
SMPD4-220ENST00000491319 BRAPQ7Z569 592 aa17.12■□□□□ 0.33
SMPD4-220ENST00000491319 TCEAL8Q8IYN2 117 aa17.12■□□□□ 0.33
SMPD4-220ENST00000491319 MYCT1Q8N699 235 aa17.12■□□□□ 0.33
SMPD4-220ENST00000491319 PJA1Q8NG27 643 aa17.12■□□□□ 0.33
SMPD4-220ENST00000491319 RASSF8Q8NHQ8 419 aa17.12■□□□□ 0.33
SMPD4-220ENST00000491319 KCNN1Q92952 543 aa17.12■□□□□ 0.33
SMPD4-220ENST00000491319 NKD2Q969F2 451 aaPredicted RBP17.12■□□□□ 0.33
SMPD4-220ENST00000491319 MCRS1Q96EZ8 462 aa17.12■□□□□ 0.33
SMPD4-220ENST00000491319 KIF12Q96FN5 646 aa17.12■□□□□ 0.33
SMPD4-220ENST00000491319 PLEKHA5Q9HAU0 1116 aa17.12■□□□□ 0.33
SMPD4-220ENST00000491319 DLGAP2Q9P1A6 1054 aa17.12■□□□□ 0.33
SMPD4-220ENST00000491319 TBX20Q9UMR3 447 aa17.12■□□□□ 0.33
SMPD4-220ENST00000491319 PCDHB8Q9UN66 801 aa17.12■□□□□ 0.33
SMPD4-220ENST00000491319 SIT1Q9Y3P8 196 aa17.12■□□□□ 0.33
SMPD4-220ENST00000491319 NUP210Q8TEM1 1887 aaPredicted RBP17.12■□□□□ 0.33
SMPD4-220ENST00000491319 LRRN2O75325 713 aa17.11■□□□□ 0.33
SMPD4-220ENST00000491319 BMP15O95972 392 aa17.11■□□□□ 0.33
SMPD4-220ENST00000491319 CPB1P15086 417 aa17.11■□□□□ 0.33
SMPD4-220ENST00000491319 PTPN2P17706 415 aa17.11■□□□□ 0.33
SMPD4-220ENST00000491319 LRPAP1P30533 357 aa17.11■□□□□ 0.33
SMPD4-220ENST00000491319 GUCY2FP51841 1108 aa17.11■□□□□ 0.33
SMPD4-220ENST00000491319 STARD6P59095 220 aa17.11■□□□□ 0.33
SMPD4-220ENST00000491319 ADCY1Q08828 1119 aa17.11■□□□□ 0.33
SMPD4-220ENST00000491319 SF3A1Q15459 793 aaKnown RBP17.11■□□□□ 0.33
SMPD4-220ENST00000491319 MLF2Q15773 248 aaPredicted RBP17.11■□□□□ 0.33
SMPD4-220ENST00000491319 ENOX2Q16206 610 aaKnown RBP17.11■□□□□ 0.33
SMPD4-220ENST00000491319 PRSS36Q5K4E3 855 aa17.11■□□□□ 0.33
SMPD4-220ENST00000491319 APPL2Q8NEU8 664 aa17.11■□□□□ 0.33
SMPD4-220ENST00000491319 RAD54LQ92698 747 aa17.11■□□□□ 0.33
SMPD4-220ENST00000491319 TCEAL4Q96EI5 215 aa17.11■□□□□ 0.33
SMPD4-220ENST00000491319 CORO1BQ9BR76 489 aa17.11■□□□□ 0.33
SMPD4-220ENST00000491319 PARVGQ9HBI0 331 aa17.11■□□□□ 0.33
SMPD4-220ENST00000491319 AVENQ9NQS1 362 aaPredicted RBP17.11■□□□□ 0.33
SMPD4-220ENST00000491319 DENND4CQ5VZ89 1909 aa17.1■□□□□ 0.33
SMPD4-220ENST00000491319 VPS37CA5D8V6 355 aaPredicted RBP17.1■□□□□ 0.33
SMPD4-220ENST00000491319 LACTBL1A8MY62 500 aa17.1■□□□□ 0.33
SMPD4-220ENST00000491319 M0QZQ0 153 aa17.1■□□□□ 0.33
SMPD4-220ENST00000491319 NRG2O14511 850 aaPredicted RBP17.1■□□□□ 0.33
SMPD4-220ENST00000491319 PIGRP01833 764 aa17.1■□□□□ 0.33
SMPD4-220ENST00000491319 KRT18P05783 430 aaKnown RBP17.1■□□□□ 0.33
SMPD4-220ENST00000491319 GLULP15104 373 aa17.1■□□□□ 0.33
SMPD4-220ENST00000491319 LONP1P36776 959 aaKnown RBP17.1■□□□□ 0.33
SMPD4-220ENST00000491319 ZBTB6Q15916 424 aa17.1■□□□□ 0.33
SMPD4-220ENST00000491319 TPGS2Q68CL5 300 aa17.1■□□□□ 0.33
SMPD4-220ENST00000491319 SLC39A4Q6P5W5 647 aa17.1■□□□□ 0.33
SMPD4-220ENST00000491319 FIZ1Q96SL8 496 aa17.1■□□□□ 0.33
SMPD4-220ENST00000491319 PLA2G2FQ9BZM2 168 aa17.1■□□□□ 0.33
SMPD4-220ENST00000491319 ZHX3Q9H4I2 956 aa17.1■□□□□ 0.33
SMPD4-220ENST00000491319 GDE1Q9NZC3 331 aa17.1■□□□□ 0.33
SMPD4-220ENST00000491319 UBQLN1Q9UMX0 589 aaKnown RBP17.1■□□□□ 0.33
SMPD4-220ENST00000491319 TIMM13Q9Y5L4 95 aaPredicted RBP17.1■□□□□ 0.33
SMPD4-220ENST00000491319 SPTBN4Q9H254 2564 aa17.1■□□□□ 0.33
SMPD4-220ENST00000491319 KIF26AQ9ULI4 1882 aaPredicted RBP17.1■□□□□ 0.33
SMPD4-220ENST00000491319 GVINP1Q7Z2Y8 2422 aa17.09■□□□□ 0.33
SMPD4-220ENST00000491319 PPEF2O14830 753 aa17.09■□□□□ 0.33
SMPD4-220ENST00000491319 OGTO15294 1046 aa17.09■□□□□ 0.33
SMPD4-220ENST00000491319 TRAK2O60296 914 aa17.09■□□□□ 0.33
SMPD4-220ENST00000491319 TBCAO75347 108 aaKnown RBP17.09■□□□□ 0.33
SMPD4-220ENST00000491319 MARCKSP29966 332 aaPredicted RBP17.09■□□□□ 0.33
SMPD4-220ENST00000491319 NMT1P30419 496 aaKnown RBP17.09■□□□□ 0.33
SMPD4-220ENST00000491319 CCR2P41597 374 aa17.09■□□□□ 0.33
SMPD4-220ENST00000491319 AARSP49588 968 aaKnown RBP eCLIP17.09■□□□□ 0.33
SMPD4-220ENST00000491319 YWHAHQ04917 246 aaPredicted RBP17.09■□□□□ 0.33
SMPD4-220ENST00000491319 TWF1Q12792 350 aa17.09■□□□□ 0.33
SMPD4-220ENST00000491319 SLC44A4Q53GD3 710 aa17.09■□□□□ 0.33
SMPD4-220ENST00000491319 RNF19BQ6ZMZ0 732 aa17.09■□□□□ 0.33
SMPD4-220ENST00000491319 LARP4BQ92615 738 aaKnown RBP17.09■□□□□ 0.33
SMPD4-220ENST00000491319 SHDQ96IW2 340 aa17.09■□□□□ 0.33
SMPD4-220ENST00000491319 MSTO1Q9BUK6 570 aa17.09■□□□□ 0.33
SMPD4-220ENST00000491319 DDX23Q9BUQ8 820 aaKnown RBP17.09■□□□□ 0.33
SMPD4-220ENST00000491319 RPF1Q9H9Y2 349 aaKnown RBP17.09■□□□□ 0.33
SMPD4-220ENST00000491319 AFF4Q9UHB7 1163 aaKnown RBP17.09■□□□□ 0.33
SMPD4-220ENST00000491319 OBSL1O75147 1896 aa17.09■□□□□ 0.33
SMPD4-220ENST00000491319 F5P12259 2224 aa17.09■□□□□ 0.33
SMPD4-220ENST00000491319 ZNF638Q14966 1978 aaKnown RBP17.08■□□□□ 0.33
SMPD4-220ENST00000491319 A0A0B4J269 797 aa17.08■□□□□ 0.32
SMPD4-220ENST00000491319 KANSL1LA0AUZ9 987 aa17.08■□□□□ 0.32
SMPD4-220ENST00000491319 ECI2O75521 394 aa17.08■□□□□ 0.32
SMPD4-220ENST00000491319 VNN2O95498 520 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms