RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 PTK7Q13308 1070 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 DARS2Q6PI48 645 aaKnown RBP11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 USP17L6PQ6QN14 398 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 CLEC4GQ6UXB4 293 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 TRIM67Q6ZTA4 783 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 DDHD1Q8NEL9 900 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 ZNF398Q8TD17 642 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 E2F7Q96AV8 911 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 ARHGEF26Q96DR7 871 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 NRBF2Q96F24 287 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 PNMA5Q96PV4 448 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 TECPR2O15040 1411 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 ERVV-1B6SEH8 477 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 EDF1O60869 148 aaKnown RBP11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 EYA4O95677 639 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 IL6STP40189 918 aaPredicted RBP11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 RASA3Q14644 834 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 ASTE1Q2TB18 679 aaPredicted RBP11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 TBC1D10BQ4KMP7 808 aaPredicted RBP11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 BRDTQ58F21 947 aaPredicted RBP11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 IRF2BP2Q7Z5L9 587 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 MKNK1Q9BUB5 465 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 APOL6Q9BWW8 343 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 PIDD1Q9HB75 910 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 ERVK-5Q9HDB9 667 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 SEL1LQ9UBV2 794 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 SLC24A2Q9UI40 661 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 A6NHS1 94 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 PI4K2BG5E9Z4 385 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 PYGBP11216 843 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 ANPEPP15144 967 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 POLR2BP30876 1174 aaKnown RBP11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 COPAP53621 1224 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 CDK16Q00536 496 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 COBLL1Q53SF7 1204 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 RINT1Q6NUQ1 792 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 LRRC57Q8N9N7 239 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 TTC13Q8NBP0 860 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 JADE3Q92613 823 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 ZFRQ96KR1 1074 aaKnown RBP11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 ITGB1BP2Q9UKP3 347 aa11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 RIMS1Q86UR5 1692 aaKnown RBP11.89□□□□□ -0.51
CRNKL1-204ENST00000490910 XRN1Q8IZH2 1706 aaKnown RBP11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 LOC100653049A0A140TA62 436 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 TLR3O15455 904 aaKnown RBP11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 KRT34O76011 436 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 GARSP41250 739 aaKnown RBP11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 OCA2Q04671 838 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 FAM102BQ5T8I3 360 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 C12orf60Q5U649 245 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 SUSD4Q5VX71 490 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 PPP1R18Q6NYC8 613 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 PATL1Q86TB9 770 aaKnown RBP11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 SH3TC2Q8TF17 1288 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 GDPD5Q8WTR4 605 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 CASP10Q92851 521 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 EME1Q96AY2 570 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 CMTM5Q96DZ9 223 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 OXNAD1Q96HP4 312 aaPredicted RBP11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 CALN1Q9BXU9 219 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 TMEM117Q9H0C3 514 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 OLFML3Q9NRN5 406 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 TMEM59LQ9UK28 342 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 FAM208AQ9UK61 1670 aaKnown RBP11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 TMEM131LA2VDJ0 1609 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 GOLGA8QA0A0J9YX86 632 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 GTPBP10A4D1E9 387 aaKnown RBP11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 GOLGA8OA6NCC3 632 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 WDR64B1ANS9 1081 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 GOLGA8NF8WBI6 632 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 HSPA4LO95757 839 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 IMPDH2P12268 514 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 KRT10P13645 584 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 VEGFAP15692 232 aaPredicted RBP11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 CDK7P50613 346 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 C16orf72Q14CZ0 275 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 CNPY1Q3B7I2 92 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 SBK1Q52WX2 424 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 KRT39Q6A163 491 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 DDX17Q92841 729 aaKnown RBP11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 CEP95Q96GE4 821 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 TIPINQ9BVW5 301 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 UPF3AQ9H1J1 476 aaKnown RBP11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 DNAJC18Q9H819 358 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 TM9SF1O15321 606 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 GSC2O15499 205 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 ESRRBO95718 433 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 ADRA1DP25100 572 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 RPA3P35244 121 aaPredicted RBP11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 MLH1P40692 756 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 SLC5A9Q2M3M2 681 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 PCNX4Q63HM2 1172 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 CCDC80Q76M96 950 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 OR6Y1Q8NGX8 325 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 PTPRN2Q92932 1015 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 DGCR14Q96DF8 476 aaKnown RBP11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 MAD2L2Q9UI95 211 aa11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 ZMYND8Q9ULU4 1186 aaPredicted RBP11.88□□□□□ -0.51
CRNKL1-204ENST00000490910 CREB1P16220 341 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 RPL5P46777 297 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms