RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 POLIQ9UNA4 740 aa34.1■■■■□ 3.05
LDB1-204ENST00000490751 STYXL1Q9Y6J8 313 aa34.1■■■■□ 3.05
LDB1-204ENST00000490751 H7C4K7 107 aa34.09■■■■□ 3.05
LDB1-204ENST00000490751 ACOT2P49753 483 aa34.09■■■■□ 3.05
LDB1-204ENST00000490751 MRPL58Q14197 206 aaKnown RBP34.09■■■■□ 3.05
LDB1-204ENST00000490751 UVSSAQ2YD98 709 aa34.09■■■■□ 3.05
LDB1-204ENST00000490751 CD302Q8IX05 232 aa34.09■■■■□ 3.05
LDB1-204ENST00000490751 EPS15L1Q9UBC2 864 aa34.09■■■■□ 3.05
LDB1-204ENST00000490751 AGO2Q9UKV8 859 aaKnown RBP34.09■■■■□ 3.05
LDB1-204ENST00000490751 PCDHB8Q9UN66 801 aa34.09■■■■□ 3.05
LDB1-204ENST00000490751 KMT2EQ8IZD2 1858 aa34.09■■■■□ 3.05
LDB1-204ENST00000490751 TBC1D4O60343 1298 aa34.08■■■■□ 3.05
LDB1-204ENST00000490751 XYLBO75191 536 aa34.08■■■■□ 3.05
LDB1-204ENST00000490751 ARPP19P56211 112 aa34.08■■■■□ 3.05
LDB1-204ENST00000490751 NTHL1P78549 312 aa34.08■■■■□ 3.05
LDB1-204ENST00000490751 TDGQ13569 410 aa34.08■■■■□ 3.05
LDB1-204ENST00000490751 JADE1Q6IE81 842 aa34.08■■■■□ 3.05
LDB1-204ENST00000490751 APPL2Q8NEU8 664 aa34.08■■■■□ 3.05
LDB1-204ENST00000490751 OLFML3Q9NRN5 406 aa34.08■■■■□ 3.05
LDB1-204ENST00000490751 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP34.08■■■■□ 3.05
LDB1-204ENST00000490751 IGSF9Q9P2J2 1179 aa34.08■■■■□ 3.05
LDB1-204ENST00000490751 FBXL5Q9UKA1 691 aa34.08■■■■□ 3.05
LDB1-204ENST00000490751 FRMD3A2A2Y4 597 aa34.07■■■■□ 3.04
LDB1-204ENST00000490751 WDR27A2RRH5 827 aa34.07■■■■□ 3.04
LDB1-204ENST00000490751 CUTAO60888 179 aa34.07■■■■□ 3.04
LDB1-204ENST00000490751 GCNT3O95395 438 aa34.07■■■■□ 3.04
LDB1-204ENST00000490751 PDGFBP01127 241 aaPredicted RBP34.07■■■■□ 3.04
LDB1-204ENST00000490751 FSHRP23945 695 aa34.07■■■■□ 3.04
LDB1-204ENST00000490751 KCNA1Q09470 495 aa34.07■■■■□ 3.04
LDB1-204ENST00000490751 CTXN3Q4LDR2 81 aa34.07■■■■□ 3.04
LDB1-204ENST00000490751 SPATA1Q5VX52 437 aa34.07■■■■□ 3.04
LDB1-204ENST00000490751 ZNF280DQ6N043 979 aa34.07■■■■□ 3.04
LDB1-204ENST00000490751 ZNF461Q8TAF7 563 aa34.07■■■■□ 3.04
LDB1-204ENST00000490751 POMGNT1Q8WZA1 660 aa34.07■■■■□ 3.04
LDB1-204ENST00000490751 PANK4Q9NVE7 773 aa34.07■■■■□ 3.04
LDB1-204ENST00000490751 NFICP08651 508 aa34.06■■■■□ 3.04
LDB1-204ENST00000490751 POU2F2P09086 479 aa34.06■■■■□ 3.04
LDB1-204ENST00000490751 CASP5P51878 434 aa34.06■■■■□ 3.04
LDB1-204ENST00000490751 PKP1Q13835 747 aa34.06■■■■□ 3.04
LDB1-204ENST00000490751 L1TD1Q5T7N2 865 aaKnown RBP34.06■■■■□ 3.04
LDB1-204ENST00000490751 RTL10Q7L3V2 364 aa34.06■■■■□ 3.04
LDB1-204ENST00000490751 BEST2Q8NFU1 509 aa34.06■■■■□ 3.04
LDB1-204ENST00000490751 ACCSQ96QU6 501 aa34.06■■■■□ 3.04
LDB1-204ENST00000490751 KCNH6Q9H252 994 aa34.06■■■■□ 3.04
LDB1-204ENST00000490751 EXOC7Q9UPT5 735 aa34.06■■■■□ 3.04
LDB1-204ENST00000490751 M0QZQ0 153 aa34.05■■■■□ 3.04
LDB1-204ENST00000490751 ABLIM3O94929 683 aa34.05■■■■□ 3.04
LDB1-204ENST00000490751 E2F4Q16254 413 aa34.05■■■■□ 3.04
LDB1-204ENST00000490751 SHC4Q6S5L8 630 aa34.05■■■■□ 3.04
LDB1-204ENST00000490751 FGFBP2Q9BYJ0 223 aa34.05■■■■□ 3.04
LDB1-204ENST00000490751 TNMDQ9H2S6 317 aa34.05■■■■□ 3.04
LDB1-204ENST00000490751 PCDHB13Q9Y5F0 798 aa34.05■■■■□ 3.04
LDB1-204ENST00000490751 LAMP2P13473 410 aa34.04■■■■□ 3.04
LDB1-204ENST00000490751 ADSSP30520 456 aa34.04■■■■□ 3.04
LDB1-204ENST00000490751 ELF1P32519 619 aa34.04■■■■□ 3.04
LDB1-204ENST00000490751 AARSP49588 968 aaKnown RBP eCLIP34.04■■■■□ 3.04
LDB1-204ENST00000490751 TMEM132DQ14C87 1099 aa34.04■■■■□ 3.04
LDB1-204ENST00000490751 POSTNQ15063 836 aa34.04■■■■□ 3.04
LDB1-204ENST00000490751 RSAD2Q8WXG1 361 aa34.04■■■■□ 3.04
LDB1-204ENST00000490751 ASB7Q9H672 318 aa34.04■■■■□ 3.04
LDB1-204ENST00000490751 DUSP12Q9UNI6 340 aa34.04■■■■□ 3.04
LDB1-204ENST00000490751 DERAQ9Y315 318 aa34.04■■■■□ 3.04
LDB1-204ENST00000490751 MUC6Q6W4X9 2439 aa34.03■■■■□ 3.04
LDB1-204ENST00000490751 ZDBF2Q9HCK1 2354 aa34.03■■■■□ 3.04
LDB1-204ENST00000490751 PPEF2O14830 753 aa34.03■■■■□ 3.04
LDB1-204ENST00000490751 CCDC65Q8IXS2 484 aa34.03■■■■□ 3.04
LDB1-204ENST00000490751 KCNG4Q8TDN1 519 aa34.03■■■■□ 3.04
LDB1-204ENST00000490751 DHX58Q96C10 678 aa34.03■■■■□ 3.04
LDB1-204ENST00000490751 CUEDC2Q9H467 287 aa34.03■■■■□ 3.04
LDB1-204ENST00000490751 HCFC1R1Q9NWW0 138 aa34.03■■■■□ 3.04
LDB1-204ENST00000490751 TIMM13Q9Y5L4 95 aaPredicted RBP34.03■■■■□ 3.04
LDB1-204ENST00000490751 PRRG1O14668 218 aa34.02■■■■□ 3.04
LDB1-204ENST00000490751 ATF2P15336 505 aa34.02■■■■□ 3.04
LDB1-204ENST00000490751 VCPP55072 806 aaKnown RBP34.02■■■■□ 3.04
LDB1-204ENST00000490751 ALCAMQ13740 583 aa34.02■■■■□ 3.04
LDB1-204ENST00000490751 CRELD2Q6UXH1 353 aaPredicted RBP34.02■■■■□ 3.04
LDB1-204ENST00000490751 DSTYKQ6XUX3 929 aa34.02■■■■□ 3.04
LDB1-204ENST00000490751 LRRC27Q9C0I9 530 aa34.02■■■■□ 3.04
LDB1-204ENST00000490751 KBTBD4Q9NVX7 518 aa34.02■■■■□ 3.04
LDB1-204ENST00000490751 NOTCH4Q99466 2003 aa34.02■■■■□ 3.04
LDB1-204ENST00000490751 ARHGEF37A1IGU5 675 aa34.01■■■■□ 3.03
LDB1-204ENST00000490751 YWHAHQ04917 246 aaPredicted RBP34.01■■■■□ 3.03
LDB1-204ENST00000490751 TPGS2Q68CL5 300 aa34.01■■■■□ 3.03
LDB1-204ENST00000490751 SYCP3Q8IZU3 236 aa34.01■■■■□ 3.03
LDB1-204ENST00000490751 CYP4F11Q9HBI6 524 aa34.01■■■■□ 3.03
LDB1-204ENST00000490751 DNMT3BQ9UBC3 853 aaKnown RBP34.01■■■■□ 3.03
LDB1-204ENST00000490751 C2CD2Q9Y426 696 aa34.01■■■■□ 3.03
LDB1-204ENST00000490751 LRG1P02750 347 aa34■■■■□ 3.03
LDB1-204ENST00000490751 POU5F1Q01860 360 aaKnown RBP34■■■■□ 3.03
LDB1-204ENST00000490751 IER5LQ5T953 404 aa34■■■■□ 3.03
LDB1-204ENST00000490751 C9orf57Q5W0N0 161 aa34■■■■□ 3.03
LDB1-204ENST00000490751 TCEAL8Q8IYN2 117 aa34■■■■□ 3.03
LDB1-204ENST00000490751 IQUBQ8NA54 791 aa34■■■■□ 3.03
LDB1-204ENST00000490751 NXPE3Q969Y0 559 aa34■■■■□ 3.03
LDB1-204ENST00000490751 CDH7Q9ULB5 785 aa34■■■■□ 3.03
LDB1-204ENST00000490751 ZFP37Q9Y6Q3 630 aaPredicted RBP34■■■■□ 3.03
LDB1-204ENST00000490751 NARSO43776 548 aaKnown RBP33.99■■■■□ 3.03
LDB1-204ENST00000490751 OAZ2O95190 189 aa33.99■■■■□ 3.03
LDB1-204ENST00000490751 SEC24AO95486 1093 aa33.99■■■■□ 3.03
LDB1-204ENST00000490751 CPB1P15086 417 aa33.99■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms