RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 PCDHB12Q9Y5F1 795 aa11.79□□□□□ -0.52
VARS2-210ENST00000490699 A0A1W2PQC6 194 aa11.78□□□□□ -0.52
VARS2-210ENST00000490699 CASTOR2A6NHX0 329 aa11.78□□□□□ -0.52
VARS2-210ENST00000490699 PODXLO00592 558 aa11.78□□□□□ -0.52
VARS2-210ENST00000490699 HLA-DRAP01903 254 aa11.78□□□□□ -0.52
VARS2-210ENST00000490699 C4BPAP04003 597 aaKnown RBP11.78□□□□□ -0.52
VARS2-210ENST00000490699 LRPAP1P30533 357 aa11.78□□□□□ -0.52
VARS2-210ENST00000490699 PPM1AP35813 382 aa11.78□□□□□ -0.52
VARS2-210ENST00000490699 TAF6P49848 677 aa11.78□□□□□ -0.52
VARS2-210ENST00000490699 MCCD1P59942 119 aaPredicted RBP11.78□□□□□ -0.52
VARS2-210ENST00000490699 ELAVL2Q12926 359 aaKnown RBP11.78□□□□□ -0.52
VARS2-210ENST00000490699 TRIM14Q14142 442 aa11.78□□□□□ -0.52
VARS2-210ENST00000490699 ZBTB6Q15916 424 aa11.78□□□□□ -0.52
VARS2-210ENST00000490699 CBWD6Q4V339 395 aa11.78□□□□□ -0.52
VARS2-210ENST00000490699 ZNF667Q5HYK9 610 aa11.78□□□□□ -0.52
VARS2-210ENST00000490699 CBWD3Q5JTY5 395 aa11.78□□□□□ -0.52
VARS2-210ENST00000490699 MIIPQ5JXC2 388 aa11.78□□□□□ -0.52
VARS2-210ENST00000490699 CBWD5Q5RIA9 395 aa11.78□□□□□ -0.52
VARS2-210ENST00000490699 DCLRE1AQ6PJP8 1040 aa11.78□□□□□ -0.52
VARS2-210ENST00000490699 CACNA2D4Q7Z3S7 1137 aa11.78□□□□□ -0.52
VARS2-210ENST00000490699 PPFIBP1Q86W92 1011 aa11.78□□□□□ -0.52
VARS2-210ENST00000490699 C1orf127Q8N9H9 656 aa11.78□□□□□ -0.52
VARS2-210ENST00000490699 ZNF397Q8NF99 534 aaPredicted RBP11.78□□□□□ -0.52
VARS2-210ENST00000490699 PLEKHO2Q8TD55 490 aa11.78□□□□□ -0.52
VARS2-210ENST00000490699 C18orf25Q96B23 403 aaPredicted RBP11.78□□□□□ -0.52
VARS2-210ENST00000490699 VWCEQ96DN2 955 aa11.78□□□□□ -0.52
VARS2-210ENST00000490699 HPDLQ96IR7 371 aa11.78□□□□□ -0.52
VARS2-210ENST00000490699 ZNF558Q96NG5 402 aa11.78□□□□□ -0.52
VARS2-210ENST00000490699 GDF15Q99988 308 aa11.78□□□□□ -0.52
VARS2-210ENST00000490699 NUP58Q9BVL2 599 aa11.78□□□□□ -0.52
VARS2-210ENST00000490699 XPO4Q9C0E2 1151 aaKnown RBP11.78□□□□□ -0.52
VARS2-210ENST00000490699 INTS2Q9H0H0 1204 aaKnown RBP11.78□□□□□ -0.52
VARS2-210ENST00000490699 MSRAQ9UJ68 235 aa11.78□□□□□ -0.52
VARS2-210ENST00000490699 FAN1Q9Y2M0 1017 aa11.78□□□□□ -0.52
VARS2-210ENST00000490699 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.78□□□□□ -0.522e-6■■□□□ 13.1
VARS2-210ENST00000490699 FSD2A1L4K1 749 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 MAP3K13O43283 966 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 TADA2AO75478 443 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 B3GAT3O94766 335 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 TBXAS1P24557 533 aaPredicted RBP11.77□□□□□ -0.53
VARS2-210ENST00000490699 BMP8BP34820 402 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 GATMP50440 423 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 MFAP3P55082 362 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 WNT7BP56706 349 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 NOP14P78316 857 aaKnown RBP11.77□□□□□ -0.53
VARS2-210ENST00000490699 BMS1Q14692 1282 aaKnown RBP11.77□□□□□ -0.53
VARS2-210ENST00000490699 NR1I3Q14994 352 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 SYCP1Q15431 976 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 SHHQ15465 462 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 RAB30Q15771 203 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 C9orf57Q5W0N0 161 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 DSTYKQ6XUX3 929 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 C15orf39Q6ZRI6 1047 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 ENOSF1Q7L5Y1 443 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 METTL23Q86XA0 190 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 TDHQ8IZJ6 230 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 TTC39CQ8N584 583 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 EHBP1Q8NDI1 1231 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 TAS1R2Q8TE23 839 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 ZNF516Q92618 1163 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 MRFAP1L1Q96HT8 127 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 FAXDC2Q96IV6 333 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 ERGIC2Q96RQ1 377 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 CRACR2AQ9BSW2 395 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 LSM14BQ9BX40 385 aaKnown RBP11.77□□□□□ -0.53
VARS2-210ENST00000490699 RNF19AQ9NV58 838 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 CXXC1Q9P0U4 656 aaPredicted RBP11.77□□□□□ -0.53
VARS2-210ENST00000490699 COQ4Q9Y3A0 265 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 TRIP11Q15643 1979 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 PTPRJQ12913 1337 aa11.77□□□□□ -0.53
VARS2-210ENST00000490699 FNDC1Q4ZHG4 1894 aaPredicted RBP11.76□□□□□ -0.53
VARS2-210ENST00000490699 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.76□□□□□ -0.53
VARS2-210ENST00000490699 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.76□□□□□ -0.53
VARS2-210ENST00000490699 HUS1O60921 280 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 STAU1O95793 577 aaKnown RBP11.76□□□□□ -0.53
VARS2-210ENST00000490699 ODC1P11926 461 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 VASPP50552 380 aaPredicted RBP11.76□□□□□ -0.53
VARS2-210ENST00000490699 CLCNKBP51801 687 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 ZNF75DP51815 510 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 MYL6P60660 151 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 HTRA4P83105 476 aaPredicted RBP11.76□□□□□ -0.53
VARS2-210ENST00000490699 KRT17Q04695 432 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 DSC1Q08554 894 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 UPP1Q16831 310 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 TSR1Q2NL82 804 aaKnown RBP11.76□□□□□ -0.53
VARS2-210ENST00000490699 WDR72Q3MJ13 1102 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 EPC2Q52LR7 807 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 C9orf50Q5SZB4 431 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 C1orf220Q5T0J3 134 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 IER5LQ5T953 404 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 RASIP1Q5U651 963 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 SPECC1LQ69YQ0 1117 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 TRIM65Q6PJ69 517 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.76□□□□□ -0.53
VARS2-210ENST00000490699 COLGALT2Q8IYK4 626 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 CRIPAKQ8N1N5 446 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 PPM1KQ8N3J5 372 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 GSTCDQ8NEC7 633 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 ZNF689Q96CS4 500 aaPredicted RBP11.76□□□□□ -0.53
VARS2-210ENST00000490699 TMEM169Q96HH4 297 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms