RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 USP49Q70CQ1 688 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 ST13P5Q8NFI4 369 aaPredicted RBP8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 ADAM32Q8TC27 787 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 RPS6KC1Q96S38 1066 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 ACO2Q99798 780 aaKnown RBP8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 TARS2Q9BW92 718 aaKnown RBP8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 COLEC11Q9BWP8 271 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 BACH2Q9BYV9 841 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 GOLGA2P5Q9HBQ8 144 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 TMPRSS4Q9NRS4 437 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 CHST7Q9NS84 486 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 DNM3Q9UQ16 869 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 CLIC4Q9Y696 253 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 GVINP1Q7Z2Y8 2422 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 ZFHX4Q86UP3 3567 aa8.05□□□□□ -1.12
PRPF4B-208ENST00000490653 CACNA1AO00555 2505 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 I3L4J1 428 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 ABLIM1O14639 778 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 N4BP3O15049 544 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 LILRA1O75019 489 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 TADA2AO75478 443 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 RFPL2O75678 378 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 BRD1O95696 1058 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 PLA2G4BP0C869 781 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 HOXB8P17481 243 aaPredicted RBP8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 PRPHP41219 470 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 DSG1Q02413 1049 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 SOX4Q06945 474 aaPredicted RBP8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 GAS6Q14393 721 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 DHX8Q14562 1220 aaKnown RBP8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 SF3A1Q15459 793 aaKnown RBP8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 PTPN21Q16825 1174 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 TMEM119Q4V9L6 283 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 RILPL1Q5EBL4 403 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 RTP2Q5QGT7 225 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 ATF7IP2Q5U623 682 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 HAUS3Q68CZ6 603 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 FUT10Q6P4F1 479 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 RSPO2Q6UXX9 243 aaPredicted RBP8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 SYT2Q8N9I0 419 aaPredicted RBP8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 KDF1Q8NAX2 398 aaPredicted RBP8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 TMEM87AQ8NBN3 555 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 RIN2Q8WYP3 895 aaPredicted RBP8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 IFT74Q96LB3 600 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 PRIMPOLQ96LW4 560 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 ZMAT2Q96NC0 199 aaKnown RBP8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 POP1Q99575 1024 aaKnown RBP8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 HAPLN2Q9GZV7 340 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 C2orf40Q9H1Z8 148 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 RXFP1Q9HBX9 757 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 SLC24A3Q9HC58 644 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 PTPRHQ9HD43 1115 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 MRPL17Q9NRX2 175 aaKnown RBP8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 BLOC1S4Q9NUP1 217 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 DMXL1Q9Y485 3027 aa8.04□□□□□ -1.12
PRPF4B-208ENST00000490653 WDR87Q6ZQQ6 2873 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 C2orf16Q68DN1 1984 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 CCDC195A0A1B0GUA6 201 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 PRR23AA6NEV1 266 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 LAD1O00515 517 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 KIF4AO95239 1232 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 THP07101 528 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 CELA2BP08218 269 aaPredicted RBP8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 HARSP12081 509 aaKnown RBP8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 MARCKSP29966 332 aaPredicted RBP8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 PTGIRP43119 386 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 BRCC3P46736 316 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 GLUD2P49448 558 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 SPAG1Q07617 926 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 GRIK3Q13003 919 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 TUSC3Q13454 348 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 MCM6Q14566 821 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 HSP90AA2PQ14568 343 aaPredicted RBP8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 BMS1Q14692 1282 aaKnown RBP8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 PPP2R5AQ15172 486 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 PTPAQ15257 358 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 TPRNQ4KMQ1 711 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 ATAT1Q5SQI0 421 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 FAM171A1Q5VUB5 890 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 CES5AQ6NT32 575 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 LILRA6Q6PI73 481 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 ALKAL1Q6UXT8 129 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 GPR149Q86SP6 731 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 CABP7Q86V35 215 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 CEP57Q86XR8 500 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 LNX1Q8TBB1 728 aaPredicted RBP8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 KIFAP3Q92845 792 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 CLIC6Q96NY7 704 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 PPP1R10Q96QC0 940 aaKnown RBP8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 CLSTN3Q9BQT9 956 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 NTPCRQ9BSD7 190 aaKnown RBP8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 EMILIN2Q9BXX0 1053 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 CDT1Q9H211 546 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 IKZF4Q9H2S9 585 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 UPF2Q9HAU5 1272 aaKnown RBP8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 KMT5AQ9NQR1 393 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 MAN1C1Q9NR34 630 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 CUEDC1Q9NWM3 386 aaPredicted RBP8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 ARHGAP28Q9P2N2 729 aa8.03□□□□□ -1.12
PRPF4B-208ENST00000490653 ADAM28Q9UKQ2 775 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms