RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 ZNF699Q32M78 642 aa14.25□□□□□ -0.13
SNX12-205ENST00000490561 SV2CQ496J9 727 aa14.25□□□□□ -0.13
SNX12-205ENST00000490561 PPFIBP1Q86W92 1011 aa14.25□□□□□ -0.13
SNX12-205ENST00000490561 LMO3Q8TAP4 145 aa14.25□□□□□ -0.13
SNX12-205ENST00000490561 JAKMIP2Q96AA8 810 aa14.25□□□□□ -0.13
SNX12-205ENST00000490561 C18orf25Q96B23 403 aaPredicted RBP14.25□□□□□ -0.13
SNX12-205ENST00000490561 CRACR2AQ9BSW2 395 aa14.25□□□□□ -0.13
SNX12-205ENST00000490561 MIOSQ9NXC5 875 aa14.25□□□□□ -0.13
SNX12-205ENST00000490561 IMPACTQ9P2X3 320 aa14.25□□□□□ -0.13
SNX12-205ENST00000490561 SIX4Q9UIU6 781 aa14.25□□□□□ -0.13
SNX12-205ENST00000490561 PDCD11Q14690 1871 aaKnown RBP14.25□□□□□ -0.13
SNX12-205ENST00000490561 A0A1W2PQJ5 194 aa14.24□□□□□ -0.13
SNX12-205ENST00000490561 PODXLO00592 558 aa14.24□□□□□ -0.13
SNX12-205ENST00000490561 GJB5O95377 273 aa14.24□□□□□ -0.13
SNX12-205ENST00000490561 SLC9A1P19634 815 aa14.24□□□□□ -0.13
SNX12-205ENST00000490561 TAF6P49848 677 aa14.24□□□□□ -0.13
SNX12-205ENST00000490561 MYL6P60660 151 aa14.24□□□□□ -0.13
SNX12-205ENST00000490561 YWHAEP62258 255 aaKnown RBP14.24□□□□□ -0.13
SNX12-205ENST00000490561 NOP14P78316 857 aaKnown RBP14.24□□□□□ -0.13
SNX12-205ENST00000490561 GCNT1Q02742 428 aa14.24□□□□□ -0.13
SNX12-205ENST00000490561 ZNF667Q5HYK9 610 aa14.24□□□□□ -0.13
SNX12-205ENST00000490561 RASIP1Q5U651 963 aa14.24□□□□□ -0.13
SNX12-205ENST00000490561 KLHDC7AQ5VTJ3 777 aa14.24□□□□□ -0.13
SNX12-205ENST00000490561 DCLRE1AQ6PJP8 1040 aa14.24□□□□□ -0.13
SNX12-205ENST00000490561 TMC6Q7Z403 805 aa14.24□□□□□ -0.13
SNX12-205ENST00000490561 TTC39CQ8N584 583 aa14.24□□□□□ -0.13
SNX12-205ENST00000490561 ZNF397Q8NF99 534 aaPredicted RBP14.24□□□□□ -0.13
SNX12-205ENST00000490561 CXorf38Q8TB03 319 aa14.24□□□□□ -0.13
SNX12-205ENST00000490561 ZNF689Q96CS4 500 aaPredicted RBP14.24□□□□□ -0.13
SNX12-205ENST00000490561 HPDLQ96IR7 371 aa14.24□□□□□ -0.13
SNX12-205ENST00000490561 YME1L1Q96TA2 773 aa14.24□□□□□ -0.13
SNX12-205ENST00000490561 NIF3L1Q9GZT8 377 aa14.24□□□□□ -0.13
SNX12-205ENST00000490561 NUCKS1Q9H1E3 243 aaKnown RBP14.24□□□□□ -0.13
SNX12-205ENST00000490561 CXCL16Q9H2A7 254 aa14.24□□□□□ -0.13
SNX12-205ENST00000490561 CEP72Q9P209 647 aa14.24□□□□□ -0.13
SNX12-205ENST00000490561 MYO6Q9UM54 1294 aa14.24□□□□□ -0.13
SNX12-205ENST00000490561 PLAGL2Q9UPG8 496 aa14.24□□□□□ -0.13
SNX12-205ENST00000490561 TMEM189-UBE2V1I3L0A0 370 aa14.23□□□□□ -0.13
SNX12-205ENST00000490561 ATP2A2P16615 1042 aaKnown RBP14.23□□□□□ -0.13
SNX12-205ENST00000490561 GUCY2FP51841 1108 aa14.23□□□□□ -0.13
SNX12-205ENST00000490561 MFAP3P55082 362 aa14.23□□□□□ -0.13
SNX12-205ENST00000490561 TNNC1P63316 161 aa14.23□□□□□ -0.13
SNX12-205ENST00000490561 HTRA4P83105 476 aaPredicted RBP14.23□□□□□ -0.13
SNX12-205ENST00000490561 SOX4Q06945 474 aaPredicted RBP14.23□□□□□ -0.13
SNX12-205ENST00000490561 UPP1Q16831 310 aa14.23□□□□□ -0.13
SNX12-205ENST00000490561 CACNA2D4Q7Z3S7 1137 aa14.23□□□□□ -0.13
SNX12-205ENST00000490561 HERC6Q8IVU3 1022 aa14.23□□□□□ -0.13
SNX12-205ENST00000490561 COLGALT2Q8IYK4 626 aa14.23□□□□□ -0.13
SNX12-205ENST00000490561 SEMA4DQ92854 862 aa14.23□□□□□ -0.13
SNX12-205ENST00000490561 ZBED2Q9BTP6 218 aa14.23□□□□□ -0.13
SNX12-205ENST00000490561 COLEC11Q9BWP8 271 aa14.23□□□□□ -0.13
SNX12-205ENST00000490561 DNAI2Q9GZS0 605 aa14.23□□□□□ -0.13
SNX12-205ENST00000490561 XYLT2Q9H1B5 865 aa14.23□□□□□ -0.13
SNX12-205ENST00000490561 GANQ9H2C0 597 aa14.23□□□□□ -0.13
SNX12-205ENST00000490561 RC3H2Q9HBD1 1191 aaKnown RBP14.23□□□□□ -0.13
SNX12-205ENST00000490561 FAM207AQ9NSI2 230 aaPredicted RBP14.23□□□□□ -0.13
SNX12-205ENST00000490561 INSL6Q9Y581 213 aa14.23□□□□□ -0.13
SNX12-205ENST00000490561 CASTOR2A6NHX0 329 aa14.22□□□□□ -0.13
SNX12-205ENST00000490561 CST3P01034 146 aaPredicted RBP14.22□□□□□ -0.13
SNX12-205ENST00000490561 ALDH2P05091 517 aa14.22□□□□□ -0.13
SNX12-205ENST00000490561 FAM163BP0C2L3 166 aa14.22□□□□□ -0.13
SNX12-205ENST00000490561 UCHL3P15374 230 aa14.22□□□□□ -0.13
SNX12-205ENST00000490561 LAG3P18627 525 aa14.22□□□□□ -0.13
SNX12-205ENST00000490561 AFF1P51825 1210 aaKnown RBP14.22□□□□□ -0.13
SNX12-205ENST00000490561 CCDC173Q0VFZ6 552 aa14.22□□□□□ -0.13
SNX12-205ENST00000490561 BTG3Q14201 252 aaPredicted RBP14.22□□□□□ -0.13
SNX12-205ENST00000490561 CNGA4Q8IV77 575 aa14.22□□□□□ -0.13
SNX12-205ENST00000490561 PPM1KQ8N3J5 372 aa14.22□□□□□ -0.13
SNX12-205ENST00000490561 SPATA18Q8TC71 538 aa14.22□□□□□ -0.13
SNX12-205ENST00000490561 RNPC3Q96LT9 517 aaKnown RBP14.22□□□□□ -0.13
SNX12-205ENST00000490561 RAD9AQ99638 391 aa14.22□□□□□ -0.13
SNX12-205ENST00000490561 UBE2OQ9C0C9 1292 aaKnown RBP14.22□□□□□ -0.13
SNX12-205ENST00000490561 CYP3A43Q9HB55 503 aa14.22□□□□□ -0.13
SNX12-205ENST00000490561 SIX2Q9NPC8 291 aa14.22□□□□□ -0.13
SNX12-205ENST00000490561 AAASQ9NRG9 546 aa14.22□□□□□ -0.13
SNX12-205ENST00000490561 GDAP2Q9NXN4 497 aa14.22□□□□□ -0.13
SNX12-205ENST00000490561 LUC7L2Q9Y383 392 aaKnown RBP14.22□□□□□ -0.13
SNX12-205ENST00000490561 NUB1Q9Y5A7 615 aa14.22□□□□□ -0.13
SNX12-205ENST00000490561 COL4A6Q14031 1691 aa14.22□□□□□ -0.13
SNX12-205ENST00000490561 KPNA7A9QM74 516 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 TRAPPC3O43617 180 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 NOL4O94818 638 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 DDHD2O94830 711 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 CCDC172P0C7W6 258 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 OR1G1P47890 313 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 KLK7P49862 253 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 GATMP50440 423 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 CLCNKBP51801 687 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 GSDMDP57764 484 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 LILRA4P59901 499 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 ELAVL2Q12926 359 aaKnown RBP14.21□□□□□ -0.13
SNX12-205ENST00000490561 TBX2Q13207 712 aaPredicted RBP14.21□□□□□ -0.13
SNX12-205ENST00000490561 CUL2Q13617 745 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 TSR1Q2NL82 804 aaKnown RBP14.21□□□□□ -0.13
SNX12-205ENST00000490561 WDR72Q3MJ13 1102 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 PAN2Q504Q3 1202 aaKnown RBP14.21□□□□□ -0.13
SNX12-205ENST00000490561 DPH6Q7L8W6 267 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 ZNF280BQ86YH2 543 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 TOP6BLQ8N6T0 577 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 PDLIM2Q96JY6 352 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms