RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 NAV1Q8NEY1 1877 aa5.4□□□□□ -1.55
CSTF1-205ENST00000490539 ROBO3Q96MS0 1386 aa5.4□□□□□ -1.55
CSTF1-205ENST00000490539 OTOFQ9HC10 1997 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 TRBV23-1A0A0A0MS06 115 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 AQP7O14520 342 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 WDR46O15213 610 aaKnown RBP5.39□□□□□ -1.55
CSTF1-205ENST00000490539 SGSM2O43147 1006 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 ORC4O43929 436 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 ZBED4O75132 1171 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 PRDM1O75626 825 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 REC8O95072 547 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 EEF2P13639 858 aaKnown RBP5.39□□□□□ -1.55
CSTF1-205ENST00000490539 LCP1P13796 627 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 AKR1B1P15121 316 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 ZKSCAN1P17029 563 aaPredicted RBP5.39□□□□□ -1.55
CSTF1-205ENST00000490539 VCAM1P19320 739 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 IGFBP6P24592 240 aaPredicted RBP5.39□□□□□ -1.55
CSTF1-205ENST00000490539 CHMLP26374 656 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 COPB2P35606 906 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 PSMC4P43686 418 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 LIMS1P48059 325 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 TERF1P54274 439 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 HERVK_113P62684 666 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 SPIRE1Q08AE8 756 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 SLC9C1Q4G0N8 1177 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 GLIPR1L2Q4G1C9 344 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 HS1BP3Q53T59 392 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 TREML2Q5T2D2 321 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 WDR78Q5VTH9 848 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 DENND5AQ6IQ26 1287 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 DBX2Q6ZNG2 339 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 TRIM48Q8IWZ4 208 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 TMEFF1Q8IYR6 380 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 ANKRD13CQ8N6S4 541 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 SLC44A5Q8NCS7 719 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.39□□□□□ -1.552e-7■■□□□ 13
CSTF1-205ENST00000490539 CD99L2Q8TCZ2 262 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 CHURC1Q8WUH1 139 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 SOCS4Q8WXH5 440 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 ANP32BQ92688 251 aaKnown RBP5.39□□□□□ -1.55
CSTF1-205ENST00000490539 DACT3Q96B18 629 aaPredicted RBP5.39□□□□□ -1.55
CSTF1-205ENST00000490539 C12orf42Q96LP6 360 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 TTC14Q96N46 770 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 PAGR1Q9BTK6 254 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 RPAP3Q9H6T3 665 aaPredicted RBP5.39□□□□□ -1.55
CSTF1-205ENST00000490539 VCPKMTQ9H867 229 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 EPB41L4AQ9HCS5 686 aaPredicted RBP5.39□□□□□ -1.55
CSTF1-205ENST00000490539 NYAP2Q9P242 653 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 PNMA2Q9UL42 364 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 TMX2Q9Y320 296 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 SIT1Q9Y3P8 196 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 RABGAP1Q9Y3P9 1069 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 RPTORQ8N122 1335 aa5.39□□□□□ -1.55
CSTF1-205ENST00000490539 MYH8P13535 1937 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 BAZ2AQ9UIF9 1905 aaKnown RBP5.38□□□□□ -1.55
CSTF1-205ENST00000490539 ANKRD11Q6UB99 2663 aaPredicted RBP5.38□□□□□ -1.55
CSTF1-205ENST00000490539 F5H6K3 240 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 STRNO43815 780 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 CHGBP05060 677 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 TOP1P11387 765 aaKnown RBP5.38□□□□□ -1.55
CSTF1-205ENST00000490539 MCCP23508 829 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 SLC1A4P43007 532 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 STAT2P52630 851 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 GPR85P60893 370 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 HAND2P61296 217 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 UBXN2AP68543 259 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 NKX3-2P78367 333 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 CAP1Q01518 475 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 KLRC3Q07444 240 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 TRAF1Q13077 416 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 SERINC3Q13530 473 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 KRT32Q14532 448 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 PLS1Q14651 629 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 RRP1BQ14684 758 aaKnown RBP5.38□□□□□ -1.55
CSTF1-205ENST00000490539 FAM47AQ5JRC9 791 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 VPS53Q5VIR6 699 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 C17orf99Q6UX52 265 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 CD300LDQ6UXZ3 194 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 LBX2Q6XYB7 198 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 CATSPERGQ6ZRH7 1159 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 OTOP1Q7RTM1 612 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 MAMDC2Q7Z304 686 aaPredicted RBP5.38□□□□□ -1.55
CSTF1-205ENST00000490539 ZNF589Q86UQ0 364 aaPredicted RBP5.38□□□□□ -1.55
CSTF1-205ENST00000490539 FAM160B2Q86V87 743 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 ZSCAN30Q86W11 494 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 SPICE1Q8N0Z3 855 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 PRPF38AQ8NAV1 312 aaKnown RBP5.38□□□□□ -1.55
CSTF1-205ENST00000490539 GMCL1P1Q8NEA9 526 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 NCOA7Q8NI08 942 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 PHOSPHO1Q8TCT1 267 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 ACER1Q8TDN7 264 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 STAG1Q8WVM7 1258 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 PTPRN2Q92932 1015 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 CEP95Q96GE4 821 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 ZCCHC4Q9H5U6 513 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 BCAS3Q9H6U6 928 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 KAT14Q9H8E8 782 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 LMBRD1Q9NUN5 540 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 SNTG2Q9NY99 539 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 MTMR4Q9NYA4 1195 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms