RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 OAZ2O95190 189 aa10.6□□□□□ -0.71
TMEM39A-210ENST00000490099 CXCL8P10145 99 aa10.6□□□□□ -0.71
TMEM39A-210ENST00000490099 NASPP49321 788 aaPredicted RBP10.6□□□□□ -0.71
TMEM39A-210ENST00000490099 ROR1Q01973 937 aa10.6□□□□□ -0.71
TMEM39A-210ENST00000490099 PPM1LQ5SGD2 360 aa10.6□□□□□ -0.71
TMEM39A-210ENST00000490099 ZBTB41Q5SVQ8 909 aa10.6□□□□□ -0.71
TMEM39A-210ENST00000490099 ZNF720Q7Z2F6 126 aa10.6□□□□□ -0.71
TMEM39A-210ENST00000490099 GRASPQ7Z6J2 395 aaPredicted RBP10.6□□□□□ -0.71
TMEM39A-210ENST00000490099 MAP4K3Q8IVH8 894 aa10.6□□□□□ -0.71
TMEM39A-210ENST00000490099 TCEAL8Q8IYN2 117 aa10.6□□□□□ -0.71
TMEM39A-210ENST00000490099 MYCT1Q8N699 235 aa10.6□□□□□ -0.71
TMEM39A-210ENST00000490099 TMEM105Q8N8V8 129 aa10.6□□□□□ -0.71
TMEM39A-210ENST00000490099 BEST2Q8NFU1 509 aa10.6□□□□□ -0.71
TMEM39A-210ENST00000490099 RSAD2Q8WXG1 361 aa10.6□□□□□ -0.71
TMEM39A-210ENST00000490099 LARP4BQ92615 738 aaKnown RBP10.6□□□□□ -0.71
TMEM39A-210ENST00000490099 DNAJC19Q96DA6 116 aa10.6□□□□□ -0.71
TMEM39A-210ENST00000490099 ZSCAN16Q9H4T2 348 aaPredicted RBP10.6□□□□□ -0.71
TMEM39A-210ENST00000490099 PIDD1Q9HB75 910 aa10.6□□□□□ -0.71
TMEM39A-210ENST00000490099 ANKFY1Q9P2R3 1169 aa10.6□□□□□ -0.71
TMEM39A-210ENST00000490099 TUBGCP4Q9UGJ1 667 aa10.6□□□□□ -0.71
TMEM39A-210ENST00000490099 CPSF3Q9UKF6 684 aaKnown RBP10.6□□□□□ -0.71
TMEM39A-210ENST00000490099 CDH7Q9ULB5 785 aa10.6□□□□□ -0.71
TMEM39A-210ENST00000490099 FRMD3A2A2Y4 597 aa10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 WDR27A2RRH5 827 aa10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 MYMKA6NI61 221 aa10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 LACTBL1A8MY62 500 aa10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 H7C4K7 107 aa10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 HNRNPDLO14979 420 aaKnown RBP10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 FAM13AO94988 1023 aa10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 ATF2P15336 505 aa10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 FSHRP23945 695 aa10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 MARCKSP29966 332 aaPredicted RBP10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 TNFSF9P41273 254 aa10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 PTPN5P54829 565 aa10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 NTHL1P78549 312 aa10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 SPECC1Q5M775 1068 aa10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 LIN9Q5TKA1 542 aa10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 SPATA1Q5VX52 437 aa10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 TPGS2Q68CL5 300 aa10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 CWF19L1Q69YN2 538 aaKnown RBP10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 CD302Q8IX05 232 aa10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 SLC7A14Q8TBB6 771 aa10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 FGF13Q92913 245 aa10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 HVCN1Q96D96 273 aa10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 CLIC6Q96NY7 704 aa10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 USP28Q96RU2 1077 aa10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 OXCT2Q9BYC2 517 aaPredicted RBP10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 SLC2A4RGQ9NR83 387 aa10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 DNMT3BQ9UBC3 853 aaKnown RBP10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 SEL1LQ9UBV2 794 aa10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 FBXL5Q9UKA1 691 aa10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 UBQLN1Q9UMX0 589 aaKnown RBP10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 WDFY4Q6ZS81 3184 aa10.59□□□□□ -0.71
TMEM39A-210ENST00000490099 A0A087X0B3 334 aa10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 ANO9A1A5B4 782 aa10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 ANKRD63C9JTQ0 380 aa10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 PIRO00625 290 aa10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 STX6O43752 255 aa10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 NARSO43776 548 aaKnown RBP10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 XYLBO75191 536 aa10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 MICAL2O94851 1124 aa10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 SEC24AO95486 1093 aa10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 SRFP11831 508 aa10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 HARSP12081 509 aaKnown RBP10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 PAX3P23760 479 aa10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 NMT1P30419 496 aaKnown RBP10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 ADSSP30520 456 aa10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 GBP2P32456 591 aaPredicted RBP10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 LIG4P49917 911 aa10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 DHX8Q14562 1220 aaKnown RBP10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 ZC2HC1CQ53FD0 456 aaPredicted RBP10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 SLFN12LQ6IEE8 588 aa10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 CRELD2Q6UXH1 353 aaPredicted RBP10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 TMEM130Q8N3G9 435 aa10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 KRI1Q8N9T8 703 aaKnown RBP10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 LINC00301Q8NCQ3 95 aa10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 APPL2Q8NEU8 664 aa10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 DDX12PQ92771 950 aa10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 RPP25Q9BUL9 199 aaKnown RBP10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 IRF2BPLQ9H1B7 796 aa10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 ASB7Q9H672 318 aa10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 CCDC39Q9UFE4 941 aa10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 DERAQ9Y315 318 aa10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 NUB1Q9Y5A7 615 aa10.58□□□□□ -0.72
TMEM39A-210ENST00000490099 PDCD11Q14690 1871 aaKnown RBP10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 KRBA1A5PL33 1030 aa10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 K7ENM7 598 aa10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 CCL16O15467 120 aa10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 TBCAO75347 108 aaKnown RBP10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 VNN2O95498 520 aa10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 PDIA4P13667 645 aaKnown RBP10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 GAP43P17677 238 aa10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 AOC1P19801 751 aa10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 TYMPP19971 482 aa10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 MRE11P49959 708 aa10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 EPHA5P54756 1037 aa10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 SPAG1Q07617 926 aa10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 RRAGBQ5VZM2 374 aa10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 PHLDB3Q6NSJ2 640 aa10.57□□□□□ -0.72
TMEM39A-210ENST00000490099 PARM1Q6UWI2 310 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms