RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 ANKRD2Q9GZV1 360 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 EURLQ9NYK6 297 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 PLK2Q9NYY3 685 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 PKD2L1Q9P0L9 805 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 CEP72Q9P209 647 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 ZFP69BQ9UJL9 534 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 ACTL7BQ9Y614 415 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 GPC6Q9Y625 555 aaPredicted RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 TLL2Q9Y6L7 1015 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 ATP8B3O60423 1300 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 DDX60Q8IY21 1712 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 A0A0A6YYK5 440 aaPredicted RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 SPECC1L-ADORA2AF8WAN1 911 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 C2CD2LO14523 706 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 GYG2O15488 501 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 ZNF862O60290 1169 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 KDM1AO60341 852 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 EXOC3O60645 756 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 PHF2O75151 1096 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 TRMUO75648 421 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 OR6B1O95007 311 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 ZBED1O96006 694 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 LDHAP00338 332 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 UQCRBP14927 111 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 BRAFP15056 766 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 HOXA7P31268 230 aaPredicted RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 KRT2P35908 639 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 GRIA2P42262 883 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 CHN2P52757 468 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 AP2B1P63010 937 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 AIMP1Q12904 312 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 FOXC1Q12948 553 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 ORC1Q13415 861 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 GCKRQ14397 625 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 HLFQ16534 295 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 RTN1Q16799 776 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 RABL6Q3YEC7 729 aaPredicted RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 ZNF394Q53GI3 561 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 TAF1BQ53T94 588 aaPredicted RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 PEX26Q7Z412 305 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 ETFBKMTQ8IXQ9 262 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 ANKRD35Q8N283 1001 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 SRBD1Q8N5C6 995 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 ALLCQ8N6M5 410 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 SPATA5Q8NB90 893 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 FBXO25Q8TCJ0 367 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 DTX3LQ8TDB6 740 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 DDI1Q8WTU0 396 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 PYROXD1Q8WU10 500 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 APPBP2Q92624 585 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 MCUR1Q96AQ8 359 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 HES6Q96HZ4 224 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 COX4I2Q96KJ9 171 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 OSBPL10Q9BXB5 764 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 SPZ1Q9BXG8 430 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 MAK16Q9BXY0 300 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 STK33Q9BYT3 514 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 DRC3Q9H069 523 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 MRPL46Q9H2W6 279 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 USP29Q9HBJ7 922 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 GPAMQ9HCL2 828 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 AAASQ9NRG9 546 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 DDX18Q9NVP1 670 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 UBAP1Q9NZ09 502 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 DKK3Q9UBP4 350 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 PRKAG2Q9UGJ0 569 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 PHTF1Q9UMS5 762 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 STX8Q9UNK0 236 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 FAF1Q9UNN5 650 aaPredicted RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 DMTF1Q9Y222 760 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 TRAF3IP3Q9Y228 551 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 SNX24Q9Y343 169 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 TSC22D4Q9Y3Q8 395 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 HEY1Q9Y5J3 304 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 FLT4P35916 1363 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 MYH6P13533 1939 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 A0A087X0T9 212 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 IQCA1LA6NCM1 817 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 NEURL1BA8MQ27 555 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 GOLGA8TH3BQL2 631 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 FBP2O00757 339 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 ADCY3O60266 1144 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 MGEA5O60502 916 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 TLR2O60603 784 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 MAGEC1O60732 1142 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 EDF1O60869 148 aaKnown RBP5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 IGKV5-2P06315 115 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 CTSHP09668 335 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 FAM228BP0C875 321 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 GOLGA8HP0CJ92 632 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 CREB1P16220 341 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 ZNF12P17014 697 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 HSPA6P17066 643 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 VCLP18206 1134 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 ANXA13P27216 316 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 SLC18A1P54219 525 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 POLR2FP61218 127 aaKnown RBP5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 COG7P83436 770 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 FOXK2Q01167 660 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 ZBTB17Q13105 803 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms