RNA–Protein interactions for RNA: ENST00000489836.1

AC055748.1-201, humanhuman

BASIC

Gene AC055748.1, Length 959 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055748.1-201ENST00000489836 A0A0U1RQF3 1178 aa11.04□□□□□ -0.64
AC055748.1-201ENST00000489836 DENND3A2RUS2 1198 aa11.04□□□□□ -0.64
AC055748.1-201ENST00000489836 VPS37CA5D8V6 355 aaPredicted RBP11.04□□□□□ -0.64
AC055748.1-201ENST00000489836 SOWAHDA6NJG2 315 aa11.04□□□□□ -0.64
AC055748.1-201ENST00000489836 PP2D1A8MPX8 630 aa11.04□□□□□ -0.64
AC055748.1-201ENST00000489836 C5orf67F2Z3F1 127 aa11.04□□□□□ -0.64
AC055748.1-201ENST00000489836 BMP15O95972 392 aa11.04□□□□□ -0.64
AC055748.1-201ENST00000489836 ZSCAN20P17040 1043 aaPredicted RBP11.04□□□□□ -0.64
AC055748.1-201ENST00000489836 CYP11B2P19099 503 aa11.04□□□□□ -0.64
AC055748.1-201ENST00000489836 CCT6AP40227 531 aaKnown RBP11.04□□□□□ -0.64
AC055748.1-201ENST00000489836 PTENP60484 403 aa11.04□□□□□ -0.64
AC055748.1-201ENST00000489836 GRB10Q13322 594 aa11.04□□□□□ -0.64
AC055748.1-201ENST00000489836 ECHDC2Q86YB7 292 aa11.04□□□□□ -0.64
AC055748.1-201ENST00000489836 CMTR2Q8IYT2 770 aaKnown RBP11.04□□□□□ -0.64
AC055748.1-201ENST00000489836 ARMC10Q8N2F6 343 aa11.04□□□□□ -0.64
AC055748.1-201ENST00000489836 MAFAQ8NHW3 353 aaPredicted RBP11.04□□□□□ -0.64
AC055748.1-201ENST00000489836 ARNTL2Q8WYA1 636 aa11.04□□□□□ -0.64
AC055748.1-201ENST00000489836 NLRP4Q96MN2 994 aa11.04□□□□□ -0.64
AC055748.1-201ENST00000489836 NFKBIZQ9BYH8 718 aa11.04□□□□□ -0.64
AC055748.1-201ENST00000489836 MINDY3Q9H8M7 445 aa11.04□□□□□ -0.64
AC055748.1-201ENST00000489836 RNF19AQ9NV58 838 aa11.04□□□□□ -0.64
AC055748.1-201ENST00000489836 TMEM161AQ9NX61 479 aa11.04□□□□□ -0.64
AC055748.1-201ENST00000489836 LMCD1Q9NZU5 365 aa11.04□□□□□ -0.64
AC055748.1-201ENST00000489836 PCDHB7Q9Y5E2 793 aa11.04□□□□□ -0.64
AC055748.1-201ENST00000489836 MTCH2Q9Y6C9 303 aa11.04□□□□□ -0.64
AC055748.1-201ENST00000489836 MORC2Q9Y6X9 1032 aaPredicted RBP11.04□□□□□ -0.64
AC055748.1-201ENST00000489836 LOXHD1Q8IVV2 1947 aa11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 SCO2A0A1W2PP80 73 aa11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 STX6O43752 255 aa11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 USO1O60763 962 aaKnown RBP11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 EOMESO95936 686 aa11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 RB1P06400 928 aa11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 ATF7P17544 494 aaPredicted RBP11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 SFPQP23246 707 aaKnown RBP eCLIP11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 GLRA2P23416 452 aa11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 CDC25AP30304 524 aa11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 HOXA11P31270 313 aaPredicted RBP11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 BMPR1AP36894 532 aa11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 ARL4DP49703 201 aa11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 CAPSQ13938 189 aa11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 PTPAQ15257 358 aa11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 PCBP1Q15365 356 aaKnown RBP eCLIP11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 SF3A1Q15459 793 aaKnown RBP11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 SPRED3Q2MJR0 410 aa11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 EPC2Q52LR7 807 aa11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 KRT79Q5XKE5 535 aa11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 TMEM192Q8IY95 271 aa11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 FIBCD1Q8N539 461 aa11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 RNF149Q8NC42 400 aa11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 MCPH1Q8NEM0 835 aa11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 SCLT1Q96NL6 688 aa11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 NIF3L1Q9GZT8 377 aa11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 LIN7BQ9HAP6 207 aa11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 AGPAT5Q9NUQ2 364 aa11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 DDX19AQ9NUU7 478 aaKnown RBP11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 DACT1Q9NYF0 836 aa11.03□□□□□ -0.64
AC055748.1-201ENST00000489836 ARHGEF35A5YM69 484 aa11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 VWA3AA6NCI4 1184 aa11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 H3BNC9 293 aa11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 SLC26A4O43511 780 aa11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 ZNF623O75123 536 aa11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 EYA4O95677 639 aa11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 SRGAP2CP0DJJ0 459 aa11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 ESRRAP11474 423 aaPredicted RBP11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 GRIA4P48058 902 aa11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 GATMP50440 423 aa11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 TFDP1Q14186 410 aa11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 BTG3Q14201 252 aaPredicted RBP11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 FAM102BQ5T8I3 360 aa11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 CATSPER4Q7RTX7 472 aa11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 KCNK18Q7Z418 384 aa11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 HSCBQ8IWL3 235 aa11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 AK8Q96MA6 479 aa11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 CASD1Q96PB1 797 aa11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 TCF12Q99081 682 aa11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 CEP41Q9BYV8 373 aa11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 POLR3FQ9H1D9 316 aaPredicted RBP11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 BHMT2Q9H2M3 363 aa11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 ZSCAN16Q9H4T2 348 aaPredicted RBP11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 NPHS2Q9NP85 383 aa11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 GPRC5CQ9NQ84 441 aa11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 RWDD3Q9Y3V2 267 aa11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 CLIC4Q9Y696 253 aa11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 ARID2Q68CP9 1835 aa11.02□□□□□ -0.65
AC055748.1-201ENST00000489836 EYSQ5T1H1 3165 aa11.01□□□□□ -0.65
AC055748.1-201ENST00000489836 E9PMD0 336 aa11.01□□□□□ -0.65
AC055748.1-201ENST00000489836 PDIA4P13667 645 aaKnown RBP11.01□□□□□ -0.65
AC055748.1-201ENST00000489836 GRIN1Q05586 938 aa11.01□□□□□ -0.65
AC055748.1-201ENST00000489836 MBTD1Q05BQ5 628 aa11.01□□□□□ -0.65
AC055748.1-201ENST00000489836 TMEM119Q4V9L6 283 aa11.01□□□□□ -0.65
AC055748.1-201ENST00000489836 UBXN11Q5T124 520 aa11.01□□□□□ -0.65
AC055748.1-201ENST00000489836 CDCA2Q69YH5 1023 aaPredicted RBP11.01□□□□□ -0.65
AC055748.1-201ENST00000489836 FAM173BQ6P4H8 233 aa11.01□□□□□ -0.65
AC055748.1-201ENST00000489836 MRPL10Q7Z7H8 261 aaKnown RBP11.01□□□□□ -0.65
AC055748.1-201ENST00000489836 CCNJLQ8IV13 435 aa11.01□□□□□ -0.65
AC055748.1-201ENST00000489836 GDPD5Q8WTR4 605 aa11.01□□□□□ -0.65
AC055748.1-201ENST00000489836 P2RX5Q93086 422 aa11.01□□□□□ -0.65
AC055748.1-201ENST00000489836 CCDC43Q96MW1 224 aaKnown RBP11.01□□□□□ -0.65
AC055748.1-201ENST00000489836 RUSC1Q9BVN2 902 aa11.01□□□□□ -0.65
AC055748.1-201ENST00000489836 TMEM117Q9H0C3 514 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms