RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 TFDP1Q14186 410 aa15.95■□□□□ 0.14
COL9A1-208ENST00000489611 MAPK6Q16659 721 aa15.95■□□□□ 0.14
COL9A1-208ENST00000489611 MON1BQ7L1V2 547 aa15.95■□□□□ 0.14
COL9A1-208ENST00000489611 CCDC105Q8IYK2 499 aa15.95■□□□□ 0.14
COL9A1-208ENST00000489611 ZBTB9Q96C00 473 aa15.95■□□□□ 0.14
COL9A1-208ENST00000489611 TRIM51Q9BSJ1 452 aa15.95■□□□□ 0.14
COL9A1-208ENST00000489611 RBPJLQ9UBG7 517 aa15.95■□□□□ 0.14
COL9A1-208ENST00000489611 CCL15-CCL14A0A0B4J2E2 113 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 IGKV6-21A0A0C4DH24 114 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 OGTO15294 1046 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 ASAP2O43150 1006 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 MSCO60682 206 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 PROSCO94903 275 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 ECEL1O95672 775 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 HUNKP57058 714 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 IFFO1Q0D2I5 559 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 NCOA4Q13772 614 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 CCL15Q16663 113 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 Q3C1V9 767 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 C3orf20Q8ND61 904 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 PRPF31Q8WWY3 499 aaKnown RBP15.94■□□□□ 0.14
COL9A1-208ENST00000489611 BRI3BPQ8WY22 251 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 C18orf8Q96DM3 657 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 ZNF518BQ9C0D4 1074 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 CCDC113Q9H0I3 377 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 MROH8Q9H579 483 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.94■□□□□ 0.14
COL9A1-208ENST00000489611 PCDHB4Q9Y5E5 795 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 GRIN2DO15399 1336 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 BTBD19C9JJ37 291 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 EBAG9O00559 213 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 NOP56O00567 594 aaKnown RBP15.94■□□□□ 0.14
COL9A1-208ENST00000489611 CETPP11597 493 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 MARCKSL1P49006 195 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 GTF2A2P52657 109 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 PMS2P54278 862 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 YWHAEP62258 255 aaKnown RBP15.94■□□□□ 0.14
COL9A1-208ENST00000489611 CAV1Q03135 178 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 MCL1Q07820 350 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 CALCOCO2Q13137 446 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 KCTD2Q14681 263 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 SGSM1Q2NKQ1 1148 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 CELF3Q5SZQ8 465 aaKnown RBP15.94■□□□□ 0.14
COL9A1-208ENST00000489611 SPRYD7Q5W111 196 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 KCTD16Q68DU8 428 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 RHOT1Q8IXI2 618 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 BCAS4Q8TDM0 211 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 GTF3C2Q8WUA4 911 aaPredicted RBP15.94■□□□□ 0.14
COL9A1-208ENST00000489611 GLG1Q92896 1179 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 HAPLN2Q9GZV7 340 aa15.94■□□□□ 0.14
COL9A1-208ENST00000489611 CNOT10Q9H9A5 744 aaKnown RBP15.94■□□□□ 0.14
COL9A1-208ENST00000489611 MROH7Q68CQ1 1323 aa15.93■□□□□ 0.14
COL9A1-208ENST00000489611 ASS1P00966 412 aaKnown RBP15.93■□□□□ 0.14
COL9A1-208ENST00000489611 MDH1P40925 334 aaKnown RBP15.93■□□□□ 0.14
COL9A1-208ENST00000489611 NOMO3P69849 1222 aa15.93■□□□□ 0.14
COL9A1-208ENST00000489611 TAP1Q03518 808 aa15.93■□□□□ 0.14
COL9A1-208ENST00000489611 DUOXA2Q1HG44 320 aa15.93■□□□□ 0.14
COL9A1-208ENST00000489611 DENND2CQ68D51 928 aa15.93■□□□□ 0.14
COL9A1-208ENST00000489611 PLEKHA7Q6IQ23 1121 aa15.93■□□□□ 0.14
COL9A1-208ENST00000489611 TMEM270Q6UE05 265 aa15.93■□□□□ 0.14
COL9A1-208ENST00000489611 B4GALNT4Q76KP1 1039 aa15.93■□□□□ 0.14
COL9A1-208ENST00000489611 ADAT2Q7Z6V5 191 aaKnown RBP15.93■□□□□ 0.14
COL9A1-208ENST00000489611 RBBP8NLQ8NC74 664 aaPredicted RBP15.93■□□□□ 0.14
COL9A1-208ENST00000489611 GPR20Q99678 358 aa15.93■□□□□ 0.14
COL9A1-208ENST00000489611 STMN4Q9H169 189 aaPredicted RBP15.93■□□□□ 0.14
COL9A1-208ENST00000489611 SMARCAD1Q9H4L7 1026 aa15.93■□□□□ 0.14
COL9A1-208ENST00000489611 PARVAQ9NVD7 372 aa15.93■□□□□ 0.14
COL9A1-208ENST00000489611 ADAM22Q9P0K1 906 aa15.93■□□□□ 0.14
COL9A1-208ENST00000489611 WHRNQ9P202 907 aa15.93■□□□□ 0.14
COL9A1-208ENST00000489611 PDHXO00330 501 aa15.92■□□□□ 0.14
COL9A1-208ENST00000489611 SORBS3O60504 671 aa15.92■□□□□ 0.14
COL9A1-208ENST00000489611 GAS8O95995 478 aa15.92■□□□□ 0.14
COL9A1-208ENST00000489611 CALB1P05937 261 aa15.92■□□□□ 0.14
COL9A1-208ENST00000489611 RARAP10276 462 aa15.92■□□□□ 0.14
COL9A1-208ENST00000489611 RRM1P23921 792 aa15.92■□□□□ 0.14
COL9A1-208ENST00000489611 PLTPP55058 493 aa15.92■□□□□ 0.14
COL9A1-208ENST00000489611 FSTL1Q12841 308 aa15.92■□□□□ 0.14
COL9A1-208ENST00000489611 SIX1Q15475 284 aaPredicted RBP15.92■□□□□ 0.14
COL9A1-208ENST00000489611 SGO2Q562F6 1265 aa15.92■□□□□ 0.14
COL9A1-208ENST00000489611 SRLQ86TD4 932 aa15.92■□□□□ 0.14
COL9A1-208ENST00000489611 ZBTB45Q96K62 511 aaPredicted RBP15.92■□□□□ 0.14
COL9A1-208ENST00000489611 ACO2Q99798 780 aaKnown RBP15.92■□□□□ 0.14
COL9A1-208ENST00000489611 TCHPQ9BT92 498 aa15.92■□□□□ 0.14
COL9A1-208ENST00000489611 TMEM109Q9BVC6 243 aa15.92■□□□□ 0.14
COL9A1-208ENST00000489611 NFKBIZQ9BYH8 718 aa15.92■□□□□ 0.14
COL9A1-208ENST00000489611 TRIM31Q9BZY9 425 aa15.92■□□□□ 0.14
COL9A1-208ENST00000489611 EPN3Q9H201 632 aa15.92■□□□□ 0.14
COL9A1-208ENST00000489611 GRHL1Q9NZI5 618 aa15.92■□□□□ 0.14
COL9A1-208ENST00000489611 ATP8A1Q9Y2Q0 1164 aa15.92■□□□□ 0.14
COL9A1-208ENST00000489611 PTPRJQ12913 1337 aa15.92■□□□□ 0.14
COL9A1-208ENST00000489611 DNAJC25-GNG10A0A024R161 153 aa15.92■□□□□ 0.14
COL9A1-208ENST00000489611 TULP2O00295 520 aa15.92■□□□□ 0.14
COL9A1-208ENST00000489611 THAP12O43422 761 aa15.92■□□□□ 0.14
COL9A1-208ENST00000489611 FAM189A1O60320 539 aa15.92■□□□□ 0.14
COL9A1-208ENST00000489611 RARGP13631 454 aa15.92■□□□□ 0.14
COL9A1-208ENST00000489611 ITIH2P19823 946 aa15.92■□□□□ 0.14
COL9A1-208ENST00000489611 ZNF132P52740 706 aa15.92■□□□□ 0.14
COL9A1-208ENST00000489611 POU5F1BQ06416 359 aa15.92■□□□□ 0.14
COL9A1-208ENST00000489611 LAMTOR4Q0VGL1 99 aa15.92■□□□□ 0.14
COL9A1-208ENST00000489611 BYSLQ13895 437 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms